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Clc02G04530 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G04530
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr02:3928357..3928677
RNA-Seq ExpressionClc02G04530
SyntenyClc02G04530
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572110.1 hypothetical protein SDJN03_28838, partial [Cucurbita argyrosperma subsp. sororia]1.9e-1554.37Show/hide
Query:  MDCLLVKCGVSHQVPRIREDGSNRKARKSQGDGIVVSEEAATVKSKKWHQRRRGGGKEIKMVSSSRLRPSQRGRVELGGWLAAWLEEAEGQREKDEVKEL
        MDC LV CGVS Q  RI+ D + RK +K   DGIVV E   T K KKW +RRR  G   +   +SRL+ +  GRVE GGWLAAWLEEA       E+KEL
Subjt:  MDCLLVKCGVSHQVPRIREDGSNRKARKSQGDGIVVSEEAATVKSKKWHQRRRGGGKEIKMVSSSRLRPSQRGRVELGGWLAAWLEEAEGQREKDEVKEL

Query:  EKA
        EKA
Subjt:  EKA

KAG6589008.1 hypothetical protein SDJN03_17573, partial [Cucurbita argyrosperma subsp. sororia]7.2e-0750Show/hide
Query:  SHQVPRIREDGSNRKARKSQGDGIVVSEEAATVKSKKWHQRRRGGGKEIKMVSSSRLRPSQRG-RVELGGWLAAWLEEAEGQREKDEVKELEKA
        S QV RI +D  ++K+RK+Q D   V +    + +K+  ++RR   KE K +S + LR  QRG R ELGGWLAAWLEEAE   EKDE+K LE+A
Subjt:  SHQVPRIREDGSNRKARKSQGDGIVVSEEAATVKSKKWHQRRRGGGKEIKMVSSSRLRPSQRG-RVELGGWLAAWLEEAEGQREKDEVKELEKA

KAG6589009.1 hypothetical protein SDJN03_17574, partial [Cucurbita argyrosperma subsp. sororia]8.2e-1144.76Show/hide
Query:  MDCLLVKCGVSHQVPRIREDGSNRKARKSQGDGIVVSEEAATVKSKKWHQRRRGGGKEIKMVSSSRLRPSQRGRVELGGWLAAWLEEAEGQREKDEVKEL
        M C  +KCG S QVPRI+ D  ++K  ++Q D   V E    + +++ HQ +R   KE K  S  R      G+ E  GWLAAWLEEAEG  EKDE+K L
Subjt:  MDCLLVKCGVSHQVPRIREDGSNRKARKSQGDGIVVSEEAATVKSKKWHQRRRGGGKEIKMVSSSRLRPSQRGRVELGGWLAAWLEEAEGQREKDEVKEL

Query:  EKACK
        ++A K
Subjt:  EKACK

KAG7011763.1 Ubiquitin-conjugating enzyme E2 28 [Cucurbita argyrosperma subsp. argyrosperma]3.1e-1052.27Show/hide
Query:  RIREDGSNRKARKSQGDGIVVSEEAATVKSKKWHQRRRGGGKEIKMVSSSRLRPSQRGRVELGGWLAAWLEEAEGQREKDEVKELEKA
        RI+ D + RK +K   DGIVV E   T K KKW +RRR  G   +   +SRL+ +  GRVE GGWLAAWLEEA       E+KELEKA
Subjt:  RIREDGSNRKARKSQGDGIVVSEEAATVKSKKWHQRRRGGGKEIKMVSSSRLRPSQRGRVELGGWLAAWLEEAEGQREKDEVKELEKA

KGN43248.1 hypothetical protein Csa_020351 [Cucumis sativus]6.1e-2264.81Show/hide
Query:  MDCLLVKCGVSHQVPRIREDGSNRKARK-SQGDGIVVSEEAATVK-SKKWHQRRRGGGKEIKMV-SSSRLRPSQRGRVELGGWLAAWLEEAEGQREKDEV
        M+C L KCG  +QV RIREDG NRK RK  + D IV+ E   T+K S+K H+R R   KE KM+ SSSRL+ SQ  RVELGGWLAAWLEEAEG+REKDEV
Subjt:  MDCLLVKCGVSHQVPRIREDGSNRKARK-SQGDGIVVSEEAATVK-SKKWHQRRRGGGKEIKMV-SSSRLRPSQRGRVELGGWLAAWLEEAEGQREKDEV

Query:  KELEKACK
        KELEK  K
Subjt:  KELEKACK

TrEMBL top hitse value%identityAlignment
A0A0A0K1A5 Uncharacterized protein2.9e-2264.81Show/hide
Query:  MDCLLVKCGVSHQVPRIREDGSNRKARK-SQGDGIVVSEEAATVK-SKKWHQRRRGGGKEIKMV-SSSRLRPSQRGRVELGGWLAAWLEEAEGQREKDEV
        M+C L KCG  +QV RIREDG NRK RK  + D IV+ E   T+K S+K H+R R   KE KM+ SSSRL+ SQ  RVELGGWLAAWLEEAEG+REKDEV
Subjt:  MDCLLVKCGVSHQVPRIREDGSNRKARK-SQGDGIVVSEEAATVK-SKKWHQRRRGGGKEIKMV-SSSRLRPSQRGRVELGGWLAAWLEEAEGQREKDEV

Query:  KELEKACK
        KELEK  K
Subjt:  KELEKACK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTGTCTCCTTGTCAAGTGTGGGGTATCACATCAAGTGCCAAGAATTCGTGAAGATGGCAGTAATAGAAAGGCAAGGAAAAGTCAAGGAGATGGTATTGTCGTTAG
CGAGGAGGCTGCAACGGTAAAGAGCAAGAAATGGCATCAACGAAGACGGGGAGGCGGTAAGGAGATAAAGATGGTGTCGTCGTCGAGGTTGCGACCGTCACAAAGAGGGA
GAGTTGAGTTAGGAGGGTGGCTTGCAGCATGGTTGGAAGAGGCTGAAGGCCAAAGAGAGAAAGATGAAGTTAAAGAGTTGGAAAAGGCATGCAAAGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTGTCTCCTTGTCAAGTGTGGGGTATCACATCAAGTGCCAAGAATTCGTGAAGATGGCAGTAATAGAAAGGCAAGGAAAAGTCAAGGAGATGGTATTGTCGTTAG
CGAGGAGGCTGCAACGGTAAAGAGCAAGAAATGGCATCAACGAAGACGGGGAGGCGGTAAGGAGATAAAGATGGTGTCGTCGTCGAGGTTGCGACCGTCACAAAGAGGGA
GAGTTGAGTTAGGAGGGTGGCTTGCAGCATGGTTGGAAGAGGCTGAAGGCCAAAGAGAGAAAGATGAAGTTAAAGAGTTGGAAAAGGCATGCAAAGGCTAA
Protein sequenceShow/hide protein sequence
MDCLLVKCGVSHQVPRIREDGSNRKARKSQGDGIVVSEEAATVKSKKWHQRRRGGGKEIKMVSSSRLRPSQRGRVELGGWLAAWLEEAEGQREKDEVKELEKACKG