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Clc02G04770 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G04770
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionauxin-responsive protein SAUR21-like
Genome locationClcChr02:4132024..4132362
RNA-Seq ExpressionClc02G04770
SyntenyClc02G04770
Gene Ontology termsGO:0009733 - response to auxin (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049718.1 putative HVA22-like protein g [Cucumis melo var. makuwa]1.5e-4789.91Show/hide
Query:  MGIRLPEIILHAKQITHR-AASSHRQVGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQ
        MGIR PEIILHAKQITHR AA SHRQVGYEVTKQRS SSDVPKGHFVVYVGE+EE+RKRFVVPLSYLKNPLFQELLSKAADEFGF++QFGGITIPCA DQ
Subjt:  MGIRLPEIILHAKQITHR-AASSHRQVGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQ

Query:  FLGLTSRLS
        FLGLTSR++
Subjt:  FLGLTSRLS

XP_004144830.2 auxin-responsive protein SAUR21 [Cucumis sativus]4.4e-4787.61Show/hide
Query:  MGIRLPEIILHAKQITHRAAS-SHRQVGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQ
        MGIRLPEIILHAKQITHRAA+ SHRQVGYEVTK RS  SDVPKGHFVVYVGE+EE+RKRFVVPLSYLKNPLFQELLSKAADEFGF++ FGGITIPCA DQ
Subjt:  MGIRLPEIILHAKQITHRAAS-SHRQVGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQ

Query:  FLGLTSRLSSPIS
        FLGLTSRL+  IS
Subjt:  FLGLTSRLSSPIS

XP_008447999.1 PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]3.0e-4889.38Show/hide
Query:  MGIRLPEIILHAKQITHR-AASSHRQVGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQ
        MGIR PEIILHAKQITHR AA SHRQVGYEVTKQRS SSDVPKGHFVVYVGE+EE+RKRFVVPLSYLKNPLFQELLSKAADEFGF++QFGGITIPCA DQ
Subjt:  MGIRLPEIILHAKQITHR-AASSHRQVGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQ

Query:  FLGLTSRLSSPIS
        FLGLTSRL+  IS
Subjt:  FLGLTSRLSSPIS

XP_022928472.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]2.4e-4584.82Show/hide
Query:  MGIRLPEIILHAKQITHRAASSHRQVGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQF
        MGIRLPEIILHAKQIT      HRQ+G+EV K R  SSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAA+EFGFEHQFGGITIPCA D F
Subjt:  MGIRLPEIILHAKQITHRAASSHRQVGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQF

Query:  LGLTSRLSSPIS
        LGLTSRL++PIS
Subjt:  LGLTSRLSSPIS

XP_038887901.1 auxin-responsive protein SAUR21-like [Benincasa hispida]3.8e-5192.86Show/hide
Query:  MGIRLPEIILHAKQITHRAASSHRQVGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQF
        MGI LP IILHAKQITHRAA SHRQVGYEVTKQRS SSDVPKGHFVVYVGE+EEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQ GGITIPCA DQF
Subjt:  MGIRLPEIILHAKQITHRAASSHRQVGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQF

Query:  LGLTSRLSSPIS
        LGLTSRLS PIS
Subjt:  LGLTSRLSSPIS

TrEMBL top hitse value%identityAlignment
A0A0A0K2G9 Uncharacterized protein2.1e-4787.61Show/hide
Query:  MGIRLPEIILHAKQITHRAAS-SHRQVGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQ
        MGIRLPEIILHAKQITHRAA+ SHRQVGYEVTK RS  SDVPKGHFVVYVGE+EE+RKRFVVPLSYLKNPLFQELLSKAADEFGF++ FGGITIPCA DQ
Subjt:  MGIRLPEIILHAKQITHRAAS-SHRQVGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQ

Query:  FLGLTSRLSSPIS
        FLGLTSRL+  IS
Subjt:  FLGLTSRLSSPIS

A0A1S3BJM3 auxin-responsive protein SAUR21-like1.5e-4889.38Show/hide
Query:  MGIRLPEIILHAKQITHR-AASSHRQVGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQ
        MGIR PEIILHAKQITHR AA SHRQVGYEVTKQRS SSDVPKGHFVVYVGE+EE+RKRFVVPLSYLKNPLFQELLSKAADEFGF++QFGGITIPCA DQ
Subjt:  MGIRLPEIILHAKQITHR-AASSHRQVGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQ

Query:  FLGLTSRLSSPIS
        FLGLTSRL+  IS
Subjt:  FLGLTSRLSSPIS

A0A5A7U3A0 HVA22-like protein7.3e-4889.91Show/hide
Query:  MGIRLPEIILHAKQITHR-AASSHRQVGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQ
        MGIR PEIILHAKQITHR AA SHRQVGYEVTKQRS SSDVPKGHFVVYVGE+EE+RKRFVVPLSYLKNPLFQELLSKAADEFGF++QFGGITIPCA DQ
Subjt:  MGIRLPEIILHAKQITHR-AASSHRQVGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQ

Query:  FLGLTSRLS
        FLGLTSR++
Subjt:  FLGLTSRLS

A0A6J1EK13 auxin-responsive protein SAUR21-like1.2e-4584.82Show/hide
Query:  MGIRLPEIILHAKQITHRAASSHRQVGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQF
        MGIRLPEIILHAKQIT      HRQ+G+EV K R  SSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAA+EFGFEHQFGGITIPCA D F
Subjt:  MGIRLPEIILHAKQITHRAASSHRQVGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQF

Query:  LGLTSRLSSPIS
        LGLTSRL++PIS
Subjt:  LGLTSRLSSPIS

A0A6J1JMM0 auxin-responsive protein SAUR21-like3.4e-4583.93Show/hide
Query:  MGIRLPEIILHAKQITHRAASSHRQVGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQF
        MGIRLPEIILHAKQIT      HRQ+G+EV K R  SSDVPKGHFVVYVGEDE+ERKRFVVPLSYLKNPLFQELLSKAA+EFGFEHQFGGITIPCA D F
Subjt:  MGIRLPEIILHAKQITHRAASSHRQVGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQF

Query:  LGLTSRLSSPIS
        LGLTSRL++PIS
Subjt:  LGLTSRLSSPIS

SwissProt top hitse value%identityAlignment
P33079 Auxin-induced protein 10A57.6e-1846.15Show/hide
Query:  RAASSHRQVGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQFLGLTSRLS
        R A   R+  +  T+  S   DVPKG+  VYVG   ++ +RF +P+SYL  P FQELLS+A +EFG++H  GG+TIPC  ++FL +T+ L+
Subjt:  RAASSHRQVGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQFLGLTSRLS

P33080 Auxin-induced protein X10A7.6e-1842.59Show/hide
Query:  MGIRLPEIILHAKQITHRAASSHRQVGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQF
        MG RLP I               R+      +  S S +VPKG+ VVYVG   ++ +RF++P+SYL  P FQ+LL++A +EFG++H  GG+TIPC  D+F
Subjt:  MGIRLPEIILHAKQITHRAASSHRQVGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQF

Query:  LGLTSRLS
        L +TS L+
Subjt:  LGLTSRLS

Q41220 Auxin-responsive protein SAUR151.5e-1852.7Show/hide
Query:  RSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQFLGLTSRL
        R  SS  P+G   VYVGE+++++KR+VVP+SYL  PLFQ+LLSK+ +EFG++H  GG+TIPC    F  +TS++
Subjt:  RSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQFLGLTSRL

Q9FJF7 Auxin-responsive protein SAUR225.8e-1853.85Show/hide
Query:  VTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQFLGLTSRL
        +++  +  S  PKG   VYVG  E ++KR++VPLSYL  P FQ LLSK+ DEFGF+H  GG+TIPC  D F+ +TSRL
Subjt:  VTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQFLGLTSRL

Q9FJF9 Auxin-responsive protein SAUR212.0e-1853.66Show/hide
Query:  VGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQFLGLTSRL
        +G +    RS +S  PKG   VYVG  E ++KR++VPLSYL  P FQ LLSK+ +EFGF+H  GG+TIPC  D F+ +TSRL
Subjt:  VGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQFLGLTSRL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family6.4e-2044.04Show/hide
Query:  MGIRLPEIILHAKQITHRAASSHRQVGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQF
        M IR+  ++  +KQ+    + S   V             +PKGH  VYVGE  ++R RFVVP++YL +P FQ+LL KA +EFGF+H  GG+TIPC    F
Subjt:  MGIRLPEIILHAKQITHRAASSHRQVGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQF

Query:  LGLTSRLSS
        + L SRLS+
Subjt:  LGLTSRLSS

AT4G34770.1 SAUR-like auxin-responsive protein family2.2e-2060.81Show/hide
Query:  SGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQFLGLTSRLS
        SG+++VPKGH  VYVGE    RKRFV+P+SYL +PLFQ LL+ A +EFGF+H  GG+TIPC  D F  L S LS
Subjt:  SGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQFLGLTSRLS

AT4G34780.1 SAUR-like auxin-responsive protein family4.0e-2251.43Show/hide
Query:  IRLPEIILHAKQITHRAASSHRQVGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQFLG
        IR   I+   K++  +  S  R +            +V KGHF VYVGEDE E KRFVVP+SYL +PLFQ LL KA DEFG +HQ   +TIPCA D FL 
Subjt:  IRLPEIILHAKQITHRAASSHRQVGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQFLG

Query:  LTSRL
        +TSRL
Subjt:  LTSRL

AT4G34800.1 SAUR-like auxin-responsive protein family1.7e-2057.33Show/hide
Query:  SDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQFLGLTSRLSSPIS
        S VPKGH  VYVGE+ E +KRFVVP+SYL +P FQ LLS+A +EFGF H  GG+TIPC  + F+GL +     +S
Subjt:  SDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQFLGLTSRLSSPIS

AT4G38840.1 SAUR-like auxin-responsive protein family5.2e-2248.15Show/hide
Query:  MGIRLPEIILHAKQITHRAASSHRQVGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQF
        M IR+P ++  +KQI        RQ     +   S S DVPKG+  VYVG  E+  KRFVVP+SYL  P FQ+LL KA +EFGF+H  GG+TIPC+ + F
Subjt:  MGIRLPEIILHAKQITHRAASSHRQVGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQF

Query:  LGLTSRLS
        + L SR +
Subjt:  LGLTSRLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATTCGTCTGCCGGAGATCATTCTTCACGCAAAGCAAATAACTCACCGTGCAGCGTCATCGCACCGGCAAGTTGGGTATGAAGTGACGAAGCAACGATCGGGGTC
GTCCGATGTTCCGAAAGGCCATTTTGTGGTCTATGTTGGGGAGGACGAAGAAGAGAGGAAACGATTTGTTGTGCCATTGTCGTACTTGAAGAATCCCCTGTTTCAAGAAT
TGTTGAGTAAGGCTGCTGACGAGTTTGGATTTGAACATCAGTTCGGTGGGATTACGATTCCTTGTGCTCATGATCAATTTCTGGGTCTAACTTCTCGATTGAGCAGTCCC
ATAAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTATTCGTCTGCCGGAGATCATTCTTCACGCAAAGCAAATAACTCACCGTGCAGCGTCATCGCACCGGCAAGTTGGGTATGAAGTGACGAAGCAACGATCGGGGTC
GTCCGATGTTCCGAAAGGCCATTTTGTGGTCTATGTTGGGGAGGACGAAGAAGAGAGGAAACGATTTGTTGTGCCATTGTCGTACTTGAAGAATCCCCTGTTTCAAGAAT
TGTTGAGTAAGGCTGCTGACGAGTTTGGATTTGAACATCAGTTCGGTGGGATTACGATTCCTTGTGCTCATGATCAATTTCTGGGTCTAACTTCTCGATTGAGCAGTCCC
ATAAGCTGA
Protein sequenceShow/hide protein sequence
MGIRLPEIILHAKQITHRAASSHRQVGYEVTKQRSGSSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAADEFGFEHQFGGITIPCAHDQFLGLTSRLSSP
IS