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Clc02G04780 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G04780
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionAuxin responsive SAUR protein
Genome locationClcChr02:4148744..4151614
RNA-Seq ExpressionClc02G04780
SyntenyClc02G04780
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572092.1 Indole-3-acetic acid-induced protein ARG7, partial [Cucurbita argyrosperma subsp. sororia]3.7e-5083.74Show/hide
Query:  VLSNPVQKAIQKQGIVLVLKHTEMGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHP
        VL     K   K G +L    TEMGIHLTGIANAKQKLQRT S KYGIGSAVTNVPKGHFAVYVGET+KKRFVIPI YLNHPLFKDLLNLAEEEFGFDHP
Subjt:  VLSNPVQKAIQKQGIVLVLKHTEMGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHP

Query:  MGGLTIPCSEDYFISLTSALNCS
        MGGLTIPCSEDYFISLTS+LNCS
Subjt:  MGGLTIPCSEDYFISLTSALNCS

XP_011658585.1 auxin-responsive protein SAUR21 [Cucumis sativus]5.3e-4995.1Show/hide
Query:  MGIHLTGIANAKQKLQRTFSAKYGIGSAVT--NVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALN
        MGIHLTGIANAKQKLQRTFS KYGIGSAVT  NVPKGHFAVYVGETQKKRFV+PIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPC+EDYFISLTSALN
Subjt:  MGIHLTGIANAKQKLQRTFSAKYGIGSAVT--NVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALN

Query:  CS
        CS
Subjt:  CS

XP_022952478.1 auxin-induced protein 15A-like [Cucurbita moschata]1.4e-4987.07Show/hide
Query:  KAIQKQGIVLVLKHTEMGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIP
        K   K G +L    TEMGIHLTGIANAKQKLQRT S KYGIGSAVTNVPKGHFAVYVGET+KKRFVIPI YLNHPLFKDLLNLAEEEFGFDHPMGGLTIP
Subjt:  KAIQKQGIVLVLKHTEMGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIP

Query:  CSEDYFISLTSALNCS
        CSEDYFISLTS+LNCS
Subjt:  CSEDYFISLTSALNCS

XP_022969514.1 auxin-induced protein 15A-like [Cucurbita maxima]1.4e-4987.07Show/hide
Query:  KAIQKQGIVLVLKHTEMGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIP
        K   K G +L    TEMGIHLTGIANAKQKLQRT S KYGIGSAVTNVPKGHFAVYVGET+KKRFVIPI YLNHPLFKDLLNLAEEEFGFDHPMGGLTIP
Subjt:  KAIQKQGIVLVLKHTEMGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIP

Query:  CSEDYFISLTSALNCS
        CSEDYFISLTS+LNCS
Subjt:  CSEDYFISLTSALNCS

XP_038887902.1 auxin-induced protein 15A-like [Benincasa hispida]6.2e-5098.04Show/hide
Query:  MGIHLTGIANAKQKLQRTFSAKYGIGSAV--TNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALN
        MGIHLTGIANAKQKLQRTFSAKYGIGSAV  TNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALN
Subjt:  MGIHLTGIANAKQKLQRTFSAKYGIGSAV--TNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALN

Query:  CS
        CS
Subjt:  CS

TrEMBL top hitse value%identityAlignment
A0A0A0K174 Uncharacterized protein2.6e-4995.1Show/hide
Query:  MGIHLTGIANAKQKLQRTFSAKYGIGSAVT--NVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALN
        MGIHLTGIANAKQKLQRTFS KYGIGSAVT  NVPKGHFAVYVGETQKKRFV+PIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPC+EDYFISLTSALN
Subjt:  MGIHLTGIANAKQKLQRTFSAKYGIGSAVT--NVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALN

Query:  CS
        CS
Subjt:  CS

A0A1S3BIQ8 auxin-induced protein 15A9.7e-4995.1Show/hide
Query:  MGIHLTGIANAKQKLQRTFSAKYGIGSAVT--NVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALN
        MGIHLTGIANAKQKLQRTFS KYGIGSAVT  NVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHP GGLTIPC+EDYFISLTSALN
Subjt:  MGIHLTGIANAKQKLQRTFSAKYGIGSAVT--NVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALN

Query:  CS
        CS
Subjt:  CS

A0A5D3CL70 Auxin-induced protein 15A9.7e-4995.1Show/hide
Query:  MGIHLTGIANAKQKLQRTFSAKYGIGSAVT--NVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALN
        MGIHLTGIANAKQKLQRTFS KYGIGSAVT  NVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHP GGLTIPC+EDYFISLTSALN
Subjt:  MGIHLTGIANAKQKLQRTFSAKYGIGSAVT--NVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALN

Query:  CS
        CS
Subjt:  CS

A0A6J1GKP6 auxin-induced protein 15A-like6.7e-5087.07Show/hide
Query:  KAIQKQGIVLVLKHTEMGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIP
        K   K G +L    TEMGIHLTGIANAKQKLQRT S KYGIGSAVTNVPKGHFAVYVGET+KKRFVIPI YLNHPLFKDLLNLAEEEFGFDHPMGGLTIP
Subjt:  KAIQKQGIVLVLKHTEMGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIP

Query:  CSEDYFISLTSALNCS
        CSEDYFISLTS+LNCS
Subjt:  CSEDYFISLTSALNCS

A0A6J1I2U1 auxin-induced protein 15A-like6.7e-5087.07Show/hide
Query:  KAIQKQGIVLVLKHTEMGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIP
        K   K G +L    TEMGIHLTGIANAKQKLQRT S KYGIGSAVTNVPKGHFAVYVGET+KKRFVIPI YLNHPLFKDLLNLAEEEFGFDHPMGGLTIP
Subjt:  KAIQKQGIVLVLKHTEMGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIP

Query:  CSEDYFISLTSALNCS
        CSEDYFISLTS+LNCS
Subjt:  CSEDYFISLTSALNCS

SwissProt top hitse value%identityAlignment
P32295 Indole-3-acetic acid-induced protein ARG76.1e-2458.16Show/hide
Query:  MGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALN
        MG  L GI       ++T SA+    S V + PKG+ AVYVGE   KRFVIP+ +LN PLF+DLL+ AEEEFG+DHPMGGLTIPCSED F  +TS L+
Subjt:  MGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALN

P33080 Auxin-induced protein X10A7.5e-2254.08Show/hide
Query:  MGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALN
        MG  L GI       ++T  A     S    VPKG+  VYVG+ + +RF+IP+ YLN P F+DLLN AEEEFG+DHPMGGLTIPC ED F+++TS LN
Subjt:  MGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALN

P33081 Auxin-induced protein 15A7.5e-2256.12Show/hide
Query:  MGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALN
        MG  L GI  A               S   + PKG+ AVYVGE + KRFVIP+ YLN P F+DLL+ AEEEFG+DHPMGGLTIPCSED F  +TS LN
Subjt:  MGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALN

Q9FJF6 Auxin-responsive protein SAUR234.4e-2265.28Show/hide
Query:  SAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALN
        +AV+  PKG  AVYVGE+QKKR+++P+ YLN P F+ LL+ +EEEFGFDHPMGGLTIPC ED FI++TS L+
Subjt:  SAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALN

Q9FK62 Auxin-responsive protein SAUR243.4e-2260.98Show/hide
Query:  QRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSAL
        ++  S   G GSA    PKG  AVYVGE+QKKR+++P+ YLN P F+ LL+ +EEEFGFDHPMGGLTIPC ED FI++TS L
Subjt:  QRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSAL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family8.2e-2452.48Show/hide
Query:  MGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGE-TQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALNC
        M I ++ +  + ++L ++ S      S    +PKGH AVYVGE  QK+RFV+P+ YL+HP F+ LL  AEEEFGFDHPMGGLTIPC+E  FI L S L+ 
Subjt:  MGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGE-TQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALNC

Query:  S
        S
Subjt:  S

AT4G34770.1 SAUR-like auxin-responsive protein family2.3e-3469.23Show/hide
Query:  MGIHLTGIANAKQKLQRTFSAKYG---IGSAVTNVPKGHFAVYVGET-QKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSA
        MGI L G++ AKQKLQR+ SA+       S   NVPKGH AVYVGET  +KRFVIPI YLNHPLF+ LLNLAEEEFGFDHPMGGLTIPC+EDYF +L S 
Subjt:  MGIHLTGIANAKQKLQRTFSAKYG---IGSAVTNVPKGHFAVYVGET-QKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSA

Query:  LNCS
        L+ S
Subjt:  LNCS

AT4G38840.1 SAUR-like auxin-responsive protein family2.2e-2456.04Show/hide
Query:  IANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALN
        + ++KQ L++         S+  +VPKG+ AVYVGE   KRFV+P+ YL+ P F+DLL  AEEEFGFDHPMGGLTIPCSE+ FI L S  N
Subjt:  IANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALN

AT5G18060.1 SAUR-like auxin-responsive protein family3.1e-2365.28Show/hide
Query:  SAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALN
        +AV+  PKG  AVYVGE+QKKR+++P+ YLN P F+ LL+ +EEEFGFDHPMGGLTIPC ED FI++TS L+
Subjt:  SAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALN

AT5G18080.1 SAUR-like auxin-responsive protein family2.4e-2360.98Show/hide
Query:  QRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSAL
        ++  S   G GSA    PKG  AVYVGE+QKKR+++P+ YLN P F+ LL+ +EEEFGFDHPMGGLTIPC ED FI++TS L
Subjt:  QRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAGTCCTATCAAATCCAGTTCAAAAGGCAATTCAAAAACAGGGGATCGTTCTTGTTCTAAAGCATACAGAGATGGGAATCCATTTGACAGGAATAGCAAATGC
AAAGCAAAAGTTACAGAGAACTTTTTCGGCGAAATACGGGATTGGATCGGCGGTTACGAATGTTCCTAAAGGCCATTTTGCAGTGTACGTAGGAGAAACACAGAAGAAAA
GGTTTGTAATTCCAATATGGTACCTGAATCATCCATTGTTTAAGGATTTGCTGAACCTTGCGGAAGAAGAATTTGGATTCGATCATCCAATGGGTGGCCTCACGATTCCT
TGCAGCGAAGATTACTTCATCAGCTTAACTTCAGCTCTAAATTGTTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAAGTCCTATCAAATCCAGTTCAAAAGGCAATTCAAAAACAGGGGATCGTTCTTGTTCTAAAGCATACAGAGATGGGAATCCATTTGACAGGAATAGCAAATGC
AAAGCAAAAGTTACAGAGAACTTTTTCGGCGAAATACGGGATTGGATCGGCGGTTACGAATGTTCCTAAAGGCCATTTTGCAGTGTACGTAGGAGAAACACAGAAGAAAA
GGTTTGTAATTCCAATATGGTACCTGAATCATCCATTGTTTAAGGATTTGCTGAACCTTGCGGAAGAAGAATTTGGATTCGATCATCCAATGGGTGGCCTCACGATTCCT
TGCAGCGAAGATTACTTCATCAGCTTAACTTCAGCTCTAAATTGTTCATAA
Protein sequenceShow/hide protein sequence
MKKVLSNPVQKAIQKQGIVLVLKHTEMGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIP
CSEDYFISLTSALNCS