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Clc02G04790 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G04790
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionAuxin responsive SAUR protein
Genome locationClcChr02:4154832..4156098
RNA-Seq ExpressionClc02G04790
SyntenyClc02G04790
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049714.1 Auxin responsive SAUR protein [Cucumis melo var. makuwa]8.8e-4191.4Show/hide
Query:  MGIPLPRIVIPKHFLRRIRQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFFSHLARDS
        MGIPLPRI IPKH+ RRI QLSRTAVVPKGHLAVYVG+TEKKRFLVPVAYLSNPSFH LLSQ+EEEFGY HPMGGLTFSCTEEIFFSHLARDS
Subjt:  MGIPLPRIVIPKHFLRRIRQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFFSHLARDS

KAE8645662.1 hypothetical protein Csa_020396 [Cucumis sativus]4.8e-4792.31Show/hide
Query:  LRFIYHHLLPKMGIPLPRIVIPKHFLRRIRQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFFSHL
        LRFIYHHLLPKMGIPLPRI IPKHF  RIRQLSRTA VPKGHLAVYVGETEKKRFLVPVAYL NPSFH LLSQ+EEEFGY HPMGGLTFSCTEEIFFSHL
Subjt:  LRFIYHHLLPKMGIPLPRIVIPKHFLRRIRQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFFSHL

Query:  ARDS
        ARDS
Subjt:  ARDS

KAG6572091.1 hypothetical protein SDJN03_28819, partial [Cucurbita argyrosperma subsp. sororia]2.7e-3788.17Show/hide
Query:  MGIPLPRIVIPKHFLRRIRQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFFSHLARDS
        MGI LPRIV  KHFLRRIRQ SRTAVVPKGHLAVYVGETEKKRFLVPVAYL+NPSFH+LLS +EEEFGY HPMGGLTFSCTEEIFF HLAR S
Subjt:  MGIPLPRIVIPKHFLRRIRQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFFSHLARDS

XP_021602388.1 auxin-induced protein 15A-like [Manihot esculenta]8.3e-2364.71Show/hide
Query:  MGIPLPRIVIPKHFLRRIRQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIF
        MGI LPRIV  K  LRRI     T  VPKGH AVYVGE +KKRF VP++YL +PSF  LLSQ+EEEFG++HPMGGLT  C+E++F
Subjt:  MGIPLPRIVIPKHFLRRIRQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIF

XP_022135927.1 indole-3-acetic acid-induced protein ARG7-like [Momordica charantia]3.0e-3388.51Show/hide
Query:  MGIPLPRIVIPKHFLRRIRQLSRTAVVPKGHLAVYVGET-EKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFF
        MGI LPRIV  KHFLRRI Q SRTA VPKGHLAVYVGET +KKRFLVPVAYLSNPSFH+LLSQSEEEFGY HPMGGLTFSCTEEIFF
Subjt:  MGIPLPRIVIPKHFLRRIRQLSRTAVVPKGHLAVYVGET-EKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFF

TrEMBL top hitse value%identityAlignment
A0A0A0K2G3 Uncharacterized protein2.0e-2264.37Show/hide
Query:  MGIPLPRIVIPKHFLRRIRQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFFS
        MGI LP +V  K  L RIR    +  +PKGHLAVYVGET++KRF+VPV+YLS+PSF TLLSQ+EEEFG++HPMGGLT  C EE F +
Subjt:  MGIPLPRIVIPKHFLRRIRQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFFS

A0A0A0K4K5 Uncharacterized protein2.1e-4091.4Show/hide
Query:  MGIPLPRIVIPKHFLRRIRQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFFSHLARDS
        MGIPLPRI IPKHF  RIRQLSRTA VPKGHLAVYVGETEKKRFLVPVAYL NPSFH LLSQ+EEEFGY HPMGGLTFSCTEEIFFSHLARDS
Subjt:  MGIPLPRIVIPKHFLRRIRQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFFSHLARDS

A0A199UBQ8 Uncharacterized protein4.0e-2364.71Show/hide
Query:  MGIPLPRIVIPKHFLRRIRQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIF
        MGI LPRIV  K  LRRI     T  VPKGH AVYVGE +KKRF VP++YL +PSF  LLSQ+EEEFG++HPMGGLT  C+E++F
Subjt:  MGIPLPRIVIPKHFLRRIRQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIF

A0A5D3CK22 Auxin responsive SAUR protein4.3e-4191.4Show/hide
Query:  MGIPLPRIVIPKHFLRRIRQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFFSHLARDS
        MGIPLPRI IPKH+ RRI QLSRTAVVPKGHLAVYVG+TEKKRFLVPVAYLSNPSFH LLSQ+EEEFGY HPMGGLTFSCTEEIFFSHLARDS
Subjt:  MGIPLPRIVIPKHFLRRIRQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFFSHLARDS

A0A6J1C452 indole-3-acetic acid-induced protein ARG7-like1.5e-3388.51Show/hide
Query:  MGIPLPRIVIPKHFLRRIRQLSRTAVVPKGHLAVYVGET-EKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFF
        MGI LPRIV  KHFLRRI Q SRTA VPKGHLAVYVGET +KKRFLVPVAYLSNPSFH+LLSQSEEEFGY HPMGGLTFSCTEEIFF
Subjt:  MGIPLPRIVIPKHFLRRIRQLSRTAVVPKGHLAVYVGET-EKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFF

SwissProt top hitse value%identityAlignment
P33081 Auxin-induced protein 15A9.9e-1964.71Show/hide
Query:  IRQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIF
        IR+ S+ A  PKG+LAVYVGE + KRF++PV+YL+ PSF  LLSQ+EEEFGY HPMGGLT  C+E++F
Subjt:  IRQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIF

Q9FJF9 Auxin-responsive protein SAUR213.4e-1957.89Show/hide
Query:  RRIRQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFFSHLAR
        ++I   S  +  PKG LAVYVGE++KKR+LVP++YLS PSF  LLS+SEEEFG+ HPMGGLT  C E+ F +  +R
Subjt:  RRIRQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFFSHLAR

Q9FJG0 Auxin-responsive protein SAUR209.9e-1957.53Show/hide
Query:  RQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFFSHLAR
        R  +  +  PKG LAVYVGE++KKR+LVP++YL+ PSF  LLS+SEEEFG+ HPMGGLT  C E+ F +  +R
Subjt:  RQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFFSHLAR

Q9FJG1 Auxin-responsive protein SAUR199.9e-1958.9Show/hide
Query:  RQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFFSHLAR
        R  +  +  PKG LAVYVGE++KKR+LVP++YLS PSF  LLS+SEEEFG+ HPMGGLT  C E+ F +  +R
Subjt:  RQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFFSHLAR

Q9FK62 Auxin-responsive protein SAUR241.7e-1858.9Show/hide
Query:  RQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFFSHLAR
        R     +  PKG LAVYVGE++KKR+LVPV+YL+ PSF  LLS+SEEEFG+ HPMGGLT  C E+ F +  +R
Subjt:  RQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFFSHLAR

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family3.2e-2051.61Show/hide
Query:  MGIPLPRIV-IPKHFLRRIRQLSRTAVVPKGHLAVYVGE-TEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFFSHLAR
        M I + R++   K  L+ +   S    +PKGHLAVYVGE  +K+RF+VPV YLS+P F  LL ++EEEFG+ HPMGGLT  CTE+IF    +R
Subjt:  MGIPLPRIV-IPKHFLRRIRQLSRTAVVPKGHLAVYVGE-TEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFFSHLAR

AT4G38840.1 SAUR-like auxin-responsive protein family1.8e-2052.58Show/hide
Query:  MGIPLPRIV-IPKHFLRRIRQLSRTAV-----VPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFFSHLAR
        M I +PR++   K  LR+ + LS ++      VPKG+LAVYVGE   KRF+VPV+YL  PSF  LL ++EEEFG+ HPMGGLT  C+EEIF    +R
Subjt:  MGIPLPRIV-IPKHFLRRIRQLSRTAV-----VPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFFSHLAR

AT5G18010.1 SAUR-like auxin-responsive protein family7.0e-2058.9Show/hide
Query:  RQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFFSHLAR
        R  +  +  PKG LAVYVGE++KKR+LVP++YLS PSF  LLS+SEEEFG+ HPMGGLT  C E+ F +  +R
Subjt:  RQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFFSHLAR

AT5G18020.1 SAUR-like auxin-responsive protein family7.0e-2057.53Show/hide
Query:  RQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFFSHLAR
        R  +  +  PKG LAVYVGE++KKR+LVP++YL+ PSF  LLS+SEEEFG+ HPMGGLT  C E+ F +  +R
Subjt:  RQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFFSHLAR

AT5G18030.1 SAUR-like auxin-responsive protein family2.4e-2057.89Show/hide
Query:  RRIRQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFFSHLAR
        ++I   S  +  PKG LAVYVGE++KKR+LVP++YLS PSF  LLS+SEEEFG+ HPMGGLT  C E+ F +  +R
Subjt:  RRIRQLSRTAVVPKGHLAVYVGETEKKRFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFFSHLAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATGACCGAGGAGTTCTTTCTCCATCTACTATTTCATGTGAATGGAAGGTTCTTGTGCAAGCTGGGGTTTGTGCTTGAAGTCTTTGGGGCGTTAGAGAGCCATGT
GACCTTTATGGATTATGGCCCAAAACTCAATCCATTGTGGATGAGCTACCATTTCCAATTCTTGAGATTCATTTACCACCACCTACTACCAAAAATGGGCATCCCTTTGC
CTAGAATTGTAATTCCAAAGCACTTTCTAAGACGTATTCGTCAGTTGTCGAGAACTGCGGTTGTGCCGAAAGGCCACTTGGCTGTATATGTTGGAGAGACTGAAAAGAAA
AGATTTTTGGTCCCTGTTGCATATTTGAGCAATCCTTCATTCCATACCTTGTTGAGTCAATCTGAAGAAGAGTTTGGATATTATCATCCAATGGGTGGCCTTACTTTCTC
TTGTACAGAAGAGATTTTCTTCAGCCATTTGGCTAGAGACAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAATGACCGAGGAGTTCTTTCTCCATCTACTATTTCATGTGAATGGAAGGTTCTTGTGCAAGCTGGGGTTTGTGCTTGAAGTCTTTGGGGCGTTAGAGAGCCATGT
GACCTTTATGGATTATGGCCCAAAACTCAATCCATTGTGGATGAGCTACCATTTCCAATTCTTGAGATTCATTTACCACCACCTACTACCAAAAATGGGCATCCCTTTGC
CTAGAATTGTAATTCCAAAGCACTTTCTAAGACGTATTCGTCAGTTGTCGAGAACTGCGGTTGTGCCGAAAGGCCACTTGGCTGTATATGTTGGAGAGACTGAAAAGAAA
AGATTTTTGGTCCCTGTTGCATATTTGAGCAATCCTTCATTCCATACCTTGTTGAGTCAATCTGAAGAAGAGTTTGGATATTATCATCCAATGGGTGGCCTTACTTTCTC
TTGTACAGAAGAGATTTTCTTCAGCCATTTGGCTAGAGACAGTTAG
Protein sequenceShow/hide protein sequence
MEMTEEFFLHLLFHVNGRFLCKLGFVLEVFGALESHVTFMDYGPKLNPLWMSYHFQFLRFIYHHLLPKMGIPLPRIVIPKHFLRRIRQLSRTAVVPKGHLAVYVGETEKK
RFLVPVAYLSNPSFHTLLSQSEEEFGYYHPMGGLTFSCTEEIFFSHLARDS