; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G04835 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G04835
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionauxin-responsive protein SAUR24-like
Genome locationClcChr02:4169723..4170909
RNA-Seq ExpressionClc02G04835
SyntenyClc02G04835
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049710.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa]7.2e-3072.62Show/hide
Query:  MRFHQLLKRNQGVSIIPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHLNVL
        MR   LLKRN+GVS +PKGYCAVYVG+S+KKRF+IPI  LN+PCFQ+LL QTEEEFGY+HPM GL IHCRD IF + ISH+N L
Subjt:  MRFHQLLKRNQGVSIIPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHLNVL

KAE8645660.1 hypothetical protein Csa_020551 [Cucumis sativus]3.2e-3078.31Show/hide
Query:  MRFHQLLKRNQGVSIIPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHLNV
        M   QLLKRNQGVS IPKGYCAVYVGE++KKRFVIPIT LNQ CFQ+LL QTEE+FGYHHPM GL IHCRD IFTDLIS   +
Subjt:  MRFHQLLKRNQGVSIIPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHLNV

KAG6572089.1 Auxin-responsive protein SAUR23, partial [Cucurbita argyrosperma subsp. sororia]2.2e-2667.82Show/hide
Query:  MRFHQLLKR-----NQGVSIIPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHLN
        MR  QLL+R      +GV+++PKGYCAVYVGE +KKRFVIP+T LNQPCFQDLL Q E+EFGY+HPM GL I CR+ IFT+LIS LN
Subjt:  MRFHQLLKR-----NQGVSIIPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHLN

XP_011658582.1 auxin-responsive protein SAUR24 [Cucumis sativus]5.0e-3178.57Show/hide
Query:  MRFHQLLKRNQGVSIIPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHLNVL
        MR   LLKR+QGVS IPKGYCAVYVGES+KKRF+IPI+ LNQPCFQ+LL QTEEEFGYHHPM GL IHC+D IFT+LIS LN L
Subjt:  MRFHQLLKRNQGVSIIPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHLNVL

XP_022136192.1 auxin-responsive protein SAUR24-like [Momordica charantia]1.7e-3179.76Show/hide
Query:  MRFHQLLKRNQGVSIIPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHLNVL
        M   QLLKRNQGVS +PKGYCAVYVGES+KKRFVIPI+ LNQPCFQ+LL Q EEEFGY+HPM GL IHCRD IFTDLIS LN L
Subjt:  MRFHQLLKRNQGVSIIPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHLNVL

TrEMBL top hitse value%identityAlignment
A0A0A0K4K1 Uncharacterized protein2.9e-3279.76Show/hide
Query:  MRFHQLLKRNQGVSIIPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHLNVL
        MR   LLKRNQGVS +PKGYCAVYVGES+KKRFVIPIT LN+PCFQ LL QTEEEFGY+HPM GL IHCRD IFTDLIS++N L
Subjt:  MRFHQLLKRNQGVSIIPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHLNVL

A0A0A0K5U4 Uncharacterized protein2.4e-3178.57Show/hide
Query:  MRFHQLLKRNQGVSIIPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHLNVL
        MR   LLKR+QGVS IPKGYCAVYVGES+KKRF+IPI+ LNQPCFQ+LL QTEEEFGYHHPM GL IHC+D IFT+LIS LN L
Subjt:  MRFHQLLKRNQGVSIIPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHLNVL

A0A0A0K5V1 Uncharacterized protein8.1e-2770.11Show/hide
Query:  MRFHQLLKR-----NQGVSIIPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHLN
        M   +LL+R     NQ VS++PKGYCAVYVGE++KKRFVIPIT LNQPCFQDLL QT EEF Y+HPM GL  HC D IF DLISHLN
Subjt:  MRFHQLLKR-----NQGVSIIPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHLN

A0A5A7U363 Auxin-induced protein 15A-like3.5e-3072.62Show/hide
Query:  MRFHQLLKRNQGVSIIPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHLNVL
        MR   LLKRN+GVS +PKGYCAVYVG+S+KKRF+IPI  LN+PCFQ+LL QTEEEFGY+HPM GL IHCRD IF + ISH+N L
Subjt:  MRFHQLLKRNQGVSIIPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHLNVL

A0A6J1C4W2 auxin-responsive protein SAUR24-like8.3e-3279.76Show/hide
Query:  MRFHQLLKRNQGVSIIPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHLNVL
        M   QLLKRNQGVS +PKGYCAVYVGES+KKRFVIPI+ LNQPCFQ+LL Q EEEFGY+HPM GL IHCRD IFTDLIS LN L
Subjt:  MRFHQLLKRNQGVSIIPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHLNVL

SwissProt top hitse value%identityAlignment
P32295 Indole-3-acetic acid-induced protein ARG72.5e-1757.5Show/hide
Query:  LLKRNQGVSII---PKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHLN
        L  RN+  S +   PKGY AVYVGE+  KRFVIP++ LNQP FQDLL Q EEEFGY HPM GL I C + +F  + S L+
Subjt:  LLKRNQGVSII---PKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHLN

P33080 Auxin-induced protein X10A1.9e-1759.42Show/hide
Query:  IPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHLNVL
        +PKGY  VYVG+ + +RF+IP++ LNQP FQDLL Q EEEFGY HPM GL I C++  F  + SHLN L
Subjt:  IPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHLNVL

P33081 Auxin-induced protein 15A1.5e-1765.15Show/hide
Query:  PKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHLN
        PKGY AVYVGE + KRFVIP++ LNQP FQDLL Q EEEFGY HPM GL I C + +F  + S LN
Subjt:  PKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHLN

Q9FJF7 Auxin-responsive protein SAUR221.9e-1751.32Show/hide
Query:  LLKRNQGVSIIPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHL
        L +    VS  PKG+ AVYVGES+KKR+++P++ LNQP FQ LL ++E+EFG+ HPM GL I C +  F ++ S L
Subjt:  LLKRNQGVSIIPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHL

Q9FK62 Auxin-responsive protein SAUR241.1e-1752.56Show/hide
Query:  QLLKRNQGV-SIIPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHL
        ++L R+ G  S  PKG+ AVYVGES+KKR+++P++ LNQP FQ LL ++EEEFG+ HPM GL I C +  F ++ S L
Subjt:  QLLKRNQGV-SIIPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family1.0e-1860.29Show/hide
Query:  IPKGYCAVYVGE-SEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHLN
        IPKG+ AVYVGE  +K+RFV+P+T L+ PCFQ LL + EEEFG+ HPM GL I C + IF DL S L+
Subjt:  IPKGYCAVYVGE-SEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHLN

AT4G34810.1 SAUR-like auxin-responsive protein family1.0e-1844.44Show/hide
Query:  MNHLSQQTVTLDYMRFHQLLKRNQGVSI----IPKGYCAVYVGES---EKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLIS
        ++  +    T   ++ + L  RN+  S     +PKG+ AVYVGE    EKKRFV+PI+ LN P F++ L + EEEFG++HPM GL I CR+ +F DLI+
Subjt:  MNHLSQQTVTLDYMRFHQLLKRNQGVSI----IPKGYCAVYVGES---EKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLIS

AT4G38840.1 SAUR-like auxin-responsive protein family5.5e-2061.19Show/hide
Query:  IPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHLN
        +PKGY AVYVGE   KRFV+P++ L+QP FQDLL + EEEFG+ HPM GL I C + IF DL S  N
Subjt:  IPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHLN

AT5G18050.1 SAUR-like auxin-responsive protein family1.4e-1851.32Show/hide
Query:  LLKRNQGVSIIPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHL
        L +    VS  PKG+ AVYVGES+KKR+++P++ LNQP FQ LL ++E+EFG+ HPM GL I C +  F ++ S L
Subjt:  LLKRNQGVSIIPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHL

AT5G18080.1 SAUR-like auxin-responsive protein family8.0e-1952.56Show/hide
Query:  QLLKRNQGV-SIIPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHL
        ++L R+ G  S  PKG+ AVYVGES+KKR+++P++ LNQP FQ LL ++EEEFG+ HPM GL I C +  F ++ S L
Subjt:  QLLKRNQGV-SIIPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCATTTGAGTCAGCAAACGGTCACATTGGACTACATGAGGTTTCACCAACTTCTTAAAAGAAACCAAGGAGTTTCAATAATTCCTAAGGGTTATTGTGCCGTCTA
TGTTGGCGAGAGCGAAAAGAAGCGATTCGTGATCCCAATAACGTGCTTGAATCAACCATGTTTTCAGGACTTGCTTCTTCAGACGGAAGAAGAATTTGGTTACCATCATC
CCATGAGTGGTCTTATTATTCATTGCAGAGATGGCATCTTCACTGATCTCATCTCACATCTAAATGTTCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAACCATTTGAGTCAGCAAACGGTCACATTGGACTACATGAGGTTTCACCAACTTCTTAAAAGAAACCAAGGAGTTTCAATAATTCCTAAGGGTTATTGTGCCGTCTA
TGTTGGCGAGAGCGAAAAGAAGCGATTCGTGATCCCAATAACGTGCTTGAATCAACCATGTTTTCAGGACTTGCTTCTTCAGACGGAAGAAGAATTTGGTTACCATCATC
CCATGAGTGGTCTTATTATTCATTGCAGAGATGGCATCTTCACTGATCTCATCTCACATCTAAATGTTCTATGA
Protein sequenceShow/hide protein sequence
MNHLSQQTVTLDYMRFHQLLKRNQGVSIIPKGYCAVYVGESEKKRFVIPITCLNQPCFQDLLLQTEEEFGYHHPMSGLIIHCRDGIFTDLISHLNVL