; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G04890 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G04890
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionauxin-induced protein 15A-like
Genome locationClcChr02:4193439..4196088
RNA-Seq ExpressionClc02G04890
SyntenyClc02G04890
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011658575.1 auxin-induced protein 15A [Cucumis sativus]7.2e-4088.42Show/hide
Query:  PIIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS
        P IVTAK SLQRSSSTGNGASPKA++VPKGYF VY+GE QKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMG ITIPC+E YFLDLTRS NDS
Subjt:  PIIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS

XP_022952257.1 auxin-induced protein 15A-like [Cucurbita moschata]1.6e-3988.42Show/hide
Query:  PIIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS
        P IV+ K SLQRSSSTGNGASPKA++VPKGYFTVYVGE QKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMG ITIPCSE+ FLDLTRS NDS
Subjt:  PIIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS

XP_038887255.1 auxin-induced protein X10A-like [Benincasa hispida]5.5e-4086.6Show/hide
Query:  HKPIIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS
        H P IVTAK SLQRSSSTGNGASPKA++VPKGYF VYVG VQKKRFVIPL+YLNQPSFQDLL QAEEEFGYNHPMG ITIPC+E+YFLDLTRS NDS
Subjt:  HKPIIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS

XP_038887256.1 auxin-induced protein X10A-like [Benincasa hispida]1.6e-3988.42Show/hide
Query:  PIIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS
        P I+TAK SLQRSSSTGNGASPKA++VPKGYFTVYVG VQKKRF I LSYLNQPSFQDLLSQAEEEFGYNHPMG ITIPCSE+YFLDLTRS NDS
Subjt:  PIIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS

XP_038887900.1 auxin-induced protein X10A-like [Benincasa hispida]1.2e-3989.47Show/hide
Query:  PIIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS
        P IVTAK SLQRSSSTGNGASPKA++VPKGYFTVYVGE QKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMG ITIPC E+ FLDLTRS NDS
Subjt:  PIIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS

TrEMBL top hitse value%identityAlignment
A0A0A0K4J0 Uncharacterized protein3.5e-4088.42Show/hide
Query:  PIIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS
        P IVTAK SLQRSSSTGNGASPKA++VPKGYF VY+GE QKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMG ITIPC+E YFLDLTRS NDS
Subjt:  PIIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS

A0A5A7U7Y6 Auxin-induced protein 15A-like5.1e-3986.32Show/hide
Query:  PIIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS
        P IVTAK SLQRSSSTGNGASPKAI+VPKGYF VY+GE QKKRFVIPLSYLNQPSFQDLLSQAEE+FGYNHPMG ITIPCSE+YFLD+T   NDS
Subjt:  PIIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS

A0A6J1GJW5 auxin-induced protein 15A-like7.8e-4088.42Show/hide
Query:  PIIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS
        P IV+ K SLQRSSSTGNGASPKA++VPKGYFTVYVGE QKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMG ITIPCSE+ FLDLTRS NDS
Subjt:  PIIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS

A0A6J1GL91 auxin-induced protein X10A-like1.0e-3988.42Show/hide
Query:  PIIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS
        P IV+ K SLQRSSSTGNGASPKA++VPKGYFTVYVGE QKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMG ITIPCSE+ FLDLTRS NDS
Subjt:  PIIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS

A0A6J1HWI6 auxin-induced protein X10A-like5.1e-3987.37Show/hide
Query:  PIIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS
        P IV+ K SLQRSSSTGNGASPKA++VPKGYFTVYVGE QKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMG ITIPCSE  FLDLTR+ NDS
Subjt:  PIIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS

SwissProt top hitse value%identityAlignment
P32295 Indole-3-acetic acid-induced protein ARG71.7e-2363.41Show/hide
Query:  PSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLT
        P ++++ S  N AS K ++ PKGY  VYVGE   KRFVIP+S+LNQP FQDLLSQAEEEFGY+HPMG +TIPCSE+ F  +T
Subjt:  PSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLT

P33079 Auxin-induced protein 10A55.4e-2257.65Show/hide
Query:  LQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWND
        ++R+S     A+ K ++VPKGY  VYVG+ + +RF IP+SYLN+PSFQ+LLSQAEEEFGY+HPMG +TIPC E  FL++T   N+
Subjt:  LQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWND

P33080 Auxin-induced protein X10A2.3e-2560.92Show/hide
Query:  PSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWND
        P ++++S   N AS K++ VPKGY  VYVG+ + +RF+IP+SYLNQPSFQDLL+QAEEEFGY+HPMG +TIPC E+ FL +T   ND
Subjt:  PSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWND

P33081 Auxin-induced protein 15A2.4e-2271.83Show/hide
Query:  KAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWN
        KA + PKGY  VYVGE + KRFVIP+SYLNQPSFQDLLSQAEEEFGY+HPMG +TIPCSE+ F  +T   N
Subjt:  KAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWN

P33083 Auxin-induced protein 6B5.8e-2461.63Show/hide
Query:  PSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWN
        P ++++S + N AS KA++V KGY  VYVGE + +RFVIP+SYLN+PSFQDLLSQAEEEFGY+HP G +TIPCSE+ F  +T   N
Subjt:  PSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWN

Arabidopsis top hitse value%identityAlignment
AT4G38840.1 SAUR-like auxin-responsive protein family1.8e-2553.26Show/hide
Query:  IIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWN
        ++ ++K  L+++    + +S  +++VPKGY  VYVGE   KRFV+P+SYL+QPSFQDLL +AEEEFG++HPMG +TIPCSE  F+DL   +N
Subjt:  IIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWN

AT5G18010.1 SAUR-like auxin-responsive protein family3.3e-2255.17Show/hide
Query:  IVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLT
        ++ AK  L RS++ G+ A       PKG+  VYVGE QKKR+++PLSYL+QPSFQ LLS++EEEFG+ HPMG +TIPC E+ F+++T
Subjt:  IVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLT

AT5G18020.1 SAUR-like auxin-responsive protein family3.3e-2254.02Show/hide
Query:  IVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLT
        ++ AK  L RS++  + A       PKG+  VYVGE QKKR+++P+SYLNQPSFQ LLS++EEEFG++HPMG +TIPC E+ F+++T
Subjt:  IVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLT

AT5G18050.1 SAUR-like auxin-responsive protein family9.5e-2254.02Show/hide
Query:  IVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLT
        ++ AK  L RS++  + A       PKG+  VYVGE QKKR+++PLSYLNQPSFQ LLS++E+EFG++HPMG +TIPC E+ F+++T
Subjt:  IVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLT

AT5G18080.1 SAUR-like auxin-responsive protein family1.1e-2255.17Show/hide
Query:  IVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLT
        ++ AK  L RS+  G+ A       PKG+  VYVGE QKKR+++P+SYLNQPSFQ LLS++EEEFG++HPMG +TIPC E+ F+++T
Subjt:  IVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACTTGATTCAGGATGTCCATTCTAGAGTGGTTGTGGAAAATTTGTATACCAACATGTACAGTCGCAATCGCTACCAAGTCGCTATTAATCAACTACCTCATGTCAT
GCAGATTCTTCATTCTTCATTGAGTCCTCGAAATGCTACTGAGTCTTCTTCATTATCGAAATGTTCCAAAAGGAATTGCATGAGTTGCTCAGCCATGCTGAGGAAGACTT
TGAATTCGATGATCCCATGGGAGGCCCTACAATTCTCTGCAGAGAAAATTTGTTATTTGGAGACAAAATGGGTAGGAAGAAACACCCATGTGATAAGTCATAAGCCAATA
ATTGTTACTGCTAAGCCAAGCCTTCAGCGATCTTCATCAACAGGGAATGGAGCATCTCCAAAGGCTATCAATGTACCAAAGGGATACTTTACAGTTTATGTTGGTGAGGT
ACAAAAGAAGCGTTTTGTCATCCCACTATCATACTTGAACCAGCCGTCTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATAATCATCCAATGGGTGCCA
TCACAATTCCTTGCAGTGAAAACTATTTCCTTGATCTCACTCGGAGTTGGAATGATTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCACTTGATTCAGGATGTCCATTCTAGAGTGGTTGTGGAAAATTTGTATACCAACATGTACAGTCGCAATCGCTACCAAGTCGCTATTAATCAACTACCTCATGTCAT
GCAGATTCTTCATTCTTCATTGAGTCCTCGAAATGCTACTGAGTCTTCTTCATTATCGAAATGTTCCAAAAGGAATTGCATGAGTTGCTCAGCCATGCTGAGGAAGACTT
TGAATTCGATGATCCCATGGGAGGCCCTACAATTCTCTGCAGAGAAAATTTGTTATTTGGAGACAAAATGGGTAGGAAGAAACACCCATGTGATAAGTCATAAGCCAATA
ATTGTTACTGCTAAGCCAAGCCTTCAGCGATCTTCATCAACAGGGAATGGAGCATCTCCAAAGGCTATCAATGTACCAAAGGGATACTTTACAGTTTATGTTGGTGAGGT
ACAAAAGAAGCGTTTTGTCATCCCACTATCATACTTGAACCAGCCGTCTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATAATCATCCAATGGGTGCCA
TCACAATTCCTTGCAGTGAAAACTATTTCCTTGATCTCACTCGGAGTTGGAATGATTCATGA
Protein sequenceShow/hide protein sequence
MHLIQDVHSRVVVENLYTNMYSRNRYQVAINQLPHVMQILHSSLSPRNATESSSLSKCSKRNCMSCSAMLRKTLNSMIPWEALQFSAEKICYLETKWVGRNTHVISHKPI
IVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS