; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G04900 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G04900
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionauxin-induced protein 15A-like
Genome locationClcChr02:4198236..4199480
RNA-Seq ExpressionClc02G04900
SyntenyClc02G04900
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022952255.1 auxin-induced protein X10A-like [Cucurbita moschata]7.6e-4694.95Show/hide
Query:  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSLND
        MGFRLPRIV+ KQSLQRSSSTGNGASPKAVDVPKGYFTVYVGE QKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSED FL+LTRSLND
Subjt:  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSLND

XP_022952257.1 auxin-induced protein 15A-like [Cucurbita moschata]5.8e-4694.95Show/hide
Query:  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSLND
        MGFRLPRIV+ KQSLQRSSSTGNGASPKAVDVPKGYFTVYVGE QKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSED FL+LTRSLND
Subjt:  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSLND

XP_022989148.1 auxin-induced protein 15A-like [Cucurbita maxima]5.6e-4983.9Show/hide
Query:  ESFHIPILKRNFQVLFLEHICNMGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPM
        +SFHIPILKRNF +       NMGFRLPRIV A+QSLQRSSSTGNGASPKAVDVPKGYFTVYVGEV+K+RFVIPLSYLNQPSFQDLLSQAEEEFGY+HPM
Subjt:  ESFHIPILKRNFQVLFLEHICNMGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPM

Query:  GGITIPCSEDYFLNLTRS
        GGITIPCSE+ FL+LT+S
Subjt:  GGITIPCSEDYFLNLTRS

XP_038887254.1 auxin-induced protein 15A-like [Benincasa hispida]2.0e-4695.96Show/hide
Query:  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSLND
        MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGE QKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSE+ FLNLT+SLND
Subjt:  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSLND

XP_038887900.1 auxin-induced protein X10A-like [Benincasa hispida]2.8e-4879.1Show/hide
Query:  SKSFVIWVHSQQ-ESFHIPILKRNFQVLFLEHICNMGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLL
        +KS  I+  S++  +F IP     F    L   CNMGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGE QKKRFVIPLSYLNQPSFQDLL
Subjt:  SKSFVIWVHSQQ-ESFHIPILKRNFQVLFLEHICNMGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLL

Query:  SQAEEEFGYNHPMGGITIPCSEDYFLNLTRSLND
        SQAEEEFGYNHPMGGITIPC ED FL+LTRSLND
Subjt:  SQAEEEFGYNHPMGGITIPCSEDYFLNLTRSLND

TrEMBL top hitse value%identityAlignment
A0A0A0K4J0 Uncharacterized protein4.8e-4693.94Show/hide
Query:  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSLND
        MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYF VY+GE QKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPC+E YFL+LTRSLND
Subjt:  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSLND

A0A5A7U7Y6 Auxin-induced protein 15A-like3.1e-4590.91Show/hide
Query:  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSLND
        MGFRLPRIVTAKQSLQRSSSTGNGASPKA+DVPKGYF VY+GE QKKRFVIPLSYLNQPSFQDLLSQAEE+FGYNHPMGGITIPCSEDYFL++T  LND
Subjt:  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSLND

A0A6J1GJW5 auxin-induced protein 15A-like2.8e-4694.95Show/hide
Query:  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSLND
        MGFRLPRIV+ KQSLQRSSSTGNGASPKAVDVPKGYFTVYVGE QKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSED FL+LTRSLND
Subjt:  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSLND

A0A6J1GL91 auxin-induced protein X10A-like3.7e-4694.95Show/hide
Query:  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSLND
        MGFRLPRIV+ KQSLQRSSSTGNGASPKAVDVPKGYFTVYVGE QKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSED FL+LTRSLND
Subjt:  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSLND

A0A6J1JPE8 auxin-induced protein 15A-like2.7e-4983.9Show/hide
Query:  ESFHIPILKRNFQVLFLEHICNMGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPM
        +SFHIPILKRNF +       NMGFRLPRIV A+QSLQRSSSTGNGASPKAVDVPKGYFTVYVGEV+K+RFVIPLSYLNQPSFQDLLSQAEEEFGY+HPM
Subjt:  ESFHIPILKRNFQVLFLEHICNMGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPM

Query:  GGITIPCSEDYFLNLTRS
        GGITIPCSE+ FL+LT+S
Subjt:  GGITIPCSEDYFLNLTRS

SwissProt top hitse value%identityAlignment
P32295 Indole-3-acetic acid-induced protein ARG76.2e-2762.24Show/hide
Query:  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSLN
        MGFRLP        ++++ S  N AS K +D PKGY  VYVGE   KRFVIP+S+LNQP FQDLLSQAEEEFGY+HPMGG+TIPCSED F ++T  L+
Subjt:  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSLN

P33079 Auxin-induced protein 10A52.4e-2660.61Show/hide
Query:  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSLND
        MGFR+  IV      +R+S     A+ K VDVPKGY  VYVG+ + +RF IP+SYLN+PSFQ+LLSQAEEEFGY+HPMGG+TIPC E+ FLN+T  LN+
Subjt:  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSLND

P33080 Auxin-induced protein X10A8.7e-2962.63Show/hide
Query:  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSLND
        MGFRLP        ++++S   N AS K+V+VPKGY  VYVG+ + +RF+IP+SYLNQPSFQDLL+QAEEEFGY+HPMGG+TIPC ED FL +T  LND
Subjt:  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSLND

P33081 Auxin-induced protein 15A3.1e-2664.29Show/hide
Query:  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSLN
        MGFRLP I  A                KA D PKGY  VYVGE + KRFVIP+SYLNQPSFQDLLSQAEEEFGY+HPMGG+TIPCSED F  +T  LN
Subjt:  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSLN

P33083 Auxin-induced protein 6B7.4e-2864.29Show/hide
Query:  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSLN
        MGFRLP        ++++S + N AS KAVDV KGY  VYVGE + +RFVIP+SYLN+PSFQDLLSQAEEEFGY+HP GG+TIPCSED F ++T  LN
Subjt:  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSLN

Arabidopsis top hitse value%identityAlignment
AT4G38840.1 SAUR-like auxin-responsive protein family1.5e-2855.56Show/hide
Query:  MGFRLPRIV-TAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSLN
        M  R+PR++ ++KQ L+++    + +S  ++DVPKGY  VYVGE   KRFV+P+SYL+QPSFQDLL +AEEEFG++HPMGG+TIPCSE+ F++L    N
Subjt:  MGFRLPRIV-TAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSLN

AT5G18010.1 SAUR-like auxin-responsive protein family7.8e-2557.78Show/hide
Query:  IVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSL
        ++ AK+ L RS++ G+ A       PKG+  VYVGE QKKR+++PLSYL+QPSFQ LLS++EEEFG+ HPMGG+TIPC ED F+N+T  L
Subjt:  IVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSL

AT5G18020.1 SAUR-like auxin-responsive protein family1.7e-2457.47Show/hide
Query:  IVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLT
        ++ AK+ L RS++  + A       PKG+  VYVGE QKKR+++P+SYLNQPSFQ LLS++EEEFG++HPMGG+TIPC ED F+N+T
Subjt:  IVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLT

AT5G18060.1 SAUR-like auxin-responsive protein family1.7e-2456.04Show/hide
Query:  IVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSLN
        ++ AK+ L RS++  +         PKG+  VYVGE QKKR+++PLSYLNQPSFQ LLS++EEEFG++HPMGG+TIPC ED F+N+T  L+
Subjt:  IVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSLN

AT5G18080.1 SAUR-like auxin-responsive protein family2.7e-2557.78Show/hide
Query:  IVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSL
        ++ AK+ L RS+  G+ A       PKG+  VYVGE QKKR+++P+SYLNQPSFQ LLS++EEEFG++HPMGG+TIPC ED F+N+T  L
Subjt:  IVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAGCCAAAAGCTTTTGTTCTGACACAACAAACATACATCCATTTGGACATCGAAAACTTTCTTGTGATGTAAAGTTTTTACTATTTATTTTATTGGTTACACAAAA
ATTTGTTATTTGGAGCAAAAGTTTCGTCATTTGGGTTCACAGCCAACAAGAGTCTTTCCATATTCCAATTCTCAAACGAAATTTCCAAGTTCTTTTTTTGGAGCATATTT
GTAACATGGGTTTCCGTCTACCTAGAATTGTTACTGCTAAGCAAAGTCTTCAGCGATCTTCATCAACAGGGAACGGAGCATCTCCAAAGGCTGTTGATGTTCCAAAGGGA
TACTTTACAGTTTATGTTGGTGAGGTACAAAAGAAGCGTTTTGTCATCCCATTATCTTACTTGAACCAGCCGTCTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATT
TGGATATAATCATCCAATGGGTGGCATCACAATTCCTTGCAGTGAAGACTATTTCCTCAATCTCACTCGGAGTTTGAATGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTAGCCAAAAGCTTTTGTTCTGACACAACAAACATACATCCATTTGGACATCGAAAACTTTCTTGTGATGTAAAGTTTTTACTATTTATTTTATTGGTTACACAAAA
ATTTGTTATTTGGAGCAAAAGTTTCGTCATTTGGGTTCACAGCCAACAAGAGTCTTTCCATATTCCAATTCTCAAACGAAATTTCCAAGTTCTTTTTTTGGAGCATATTT
GTAACATGGGTTTCCGTCTACCTAGAATTGTTACTGCTAAGCAAAGTCTTCAGCGATCTTCATCAACAGGGAACGGAGCATCTCCAAAGGCTGTTGATGTTCCAAAGGGA
TACTTTACAGTTTATGTTGGTGAGGTACAAAAGAAGCGTTTTGTCATCCCATTATCTTACTTGAACCAGCCGTCTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATT
TGGATATAATCATCCAATGGGTGGCATCACAATTCCTTGCAGTGAAGACTATTTCCTCAATCTCACTCGGAGTTTGAATGATTAA
Protein sequenceShow/hide protein sequence
MLAKSFCSDTTNIHPFGHRKLSCDVKFLLFILLVTQKFVIWSKSFVIWVHSQQESFHIPILKRNFQVLFLEHICNMGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKG
YFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDYFLNLTRSLND