; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G04937 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G04937
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionauxin-responsive protein SAUR21-like
Genome locationClcChr02:4212098..4212917
RNA-Seq ExpressionClc02G04937
SyntenyClc02G04937
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008448012.1 PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]1.3e-3795.24Show/hide
Query:  MGFRL-NSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLANC
        MGFRL NSPRKSSSTVPKGF AVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVF +VTSRLANC
Subjt:  MGFRL-NSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLANC

XP_009121032.3 auxin-responsive protein SAUR20 [Brassica rapa]2.0e-2544.44Show/hide
Query:  KTIPCAIHNPFPNSVCLFTTQKTSKDKKKR------SLQFSPIYTTHQFSHLRITKTNQPRSSFRAQNHPLKPKIKT--THKIKFLKIHT-MGFR-----
        KT PC       +++C   +Q+    K +R      SL F  I+  H F H   TK +   +SF    H  K +I+T   HKI+   + + +G +     
Subjt:  KTIPCAIHNPFPNSVCLFTTQKTSKDKKKR------SLQFSPIYTTHQFSHLRITKTNQPRSSFRAQNHPLKPKIKT--THKIKFLKIHT-MGFR-----

Query:  ----LNSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL
             ++ ++++S  PKGF AVYVGE+QK+R+V+PISYL  PSFQ LLSK+EEEFGFDHPMGGLTIPC ED+F  VTSRL
Subjt:  ----LNSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL

XP_011658572.1 auxin-responsive protein SAUR21 [Cucumis sativus]9.3e-3997.62Show/hide
Query:  MGFRL-NSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLANC
        MGFRL NSPRKSSSTVPKGF AVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLANC
Subjt:  MGFRL-NSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLANC

XP_022135747.1 auxin-responsive protein SAUR21-like [Momordica charantia]6.0e-3897.59Show/hide
Query:  MGFRL-NSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLAN
        MGFRL NSPRKSSSTVPKGFFAVYVGETQKRRHVIPIS+LKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLAN
Subjt:  MGFRL-NSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLAN

XP_022952260.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]4.6e-3897.65Show/hide
Query:  MGFRL-NSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL-ANC
        MGFRL NSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL ANC
Subjt:  MGFRL-NSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL-ANC

TrEMBL top hitse value%identityAlignment
A0A0A0K4I7 Uncharacterized protein4.5e-3997.62Show/hide
Query:  MGFRL-NSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLANC
        MGFRL NSPRKSSSTVPKGF AVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLANC
Subjt:  MGFRL-NSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLANC

A0A5D3CP52 Auxin-responsive protein SAUR21-like6.5e-3895.24Show/hide
Query:  MGFRL-NSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLANC
        MGFRL NSPRKSSSTVPKGF AVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVF +VTSRLANC
Subjt:  MGFRL-NSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLANC

A0A6J1C3M2 auxin-responsive protein SAUR21-like2.9e-3897.59Show/hide
Query:  MGFRL-NSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLAN
        MGFRL NSPRKSSSTVPKGFFAVYVGETQKRRHVIPIS+LKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLAN
Subjt:  MGFRL-NSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLAN

A0A6J1GL96 auxin-responsive protein SAUR21-like2.2e-3897.65Show/hide
Query:  MGFRL-NSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL-ANC
        MGFRL NSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL ANC
Subjt:  MGFRL-NSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL-ANC

A0A6J1HY12 auxin-responsive protein SAUR21-like2.2e-3897.65Show/hide
Query:  MGFRL-NSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL-ANC
        MGFRL NSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL ANC
Subjt:  MGFRL-NSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL-ANC

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR231.0e-2475Show/hide
Query:  STVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL
        S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+EEEFGFDHPMGGLTIPC ED F  VTSRL
Subjt:  STVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL

Q9FJF7 Auxin-responsive protein SAUR226.0e-2573.53Show/hide
Query:  STVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL
        S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+E+EFGFDHPMGGLTIPC+ED F  VTSRL
Subjt:  STVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL

Q9FJF9 Auxin-responsive protein SAUR219.3e-2672.22Show/hide
Query:  RKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL
        R ++S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+EEEFGFDHPMGGLTIPC ED F  VTSRL
Subjt:  RKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL

Q9FJG0 Auxin-responsive protein SAUR204.6e-2569.33Show/hide
Query:  LNSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSR
        L+    ++S  PKGF AVYVGE+QK+R+++PISYL  PSFQ LLSK+EEEFGFDHPMGGLTIPC ED F  VTSR
Subjt:  LNSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSR

Q9FK62 Auxin-responsive protein SAUR243.5e-2572.86Show/hide
Query:  SSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL
        + S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+EEEFGFDHPMGGLTIPC ED F  VTSRL
Subjt:  SSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL

Arabidopsis top hitse value%identityAlignment
AT5G18020.1 SAUR-like auxin-responsive protein family3.3e-2669.33Show/hide
Query:  LNSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSR
        L+    ++S  PKGF AVYVGE+QK+R+++PISYL  PSFQ LLSK+EEEFGFDHPMGGLTIPC ED F  VTSR
Subjt:  LNSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSR

AT5G18030.1 SAUR-like auxin-responsive protein family6.6e-2772.22Show/hide
Query:  RKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL
        R ++S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+EEEFGFDHPMGGLTIPC ED F  VTSRL
Subjt:  RKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL

AT5G18050.1 SAUR-like auxin-responsive protein family4.3e-2673.53Show/hide
Query:  STVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL
        S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+E+EFGFDHPMGGLTIPC+ED F  VTSRL
Subjt:  STVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL

AT5G18060.1 SAUR-like auxin-responsive protein family7.3e-2675Show/hide
Query:  STVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL
        S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+EEEFGFDHPMGGLTIPC ED F  VTSRL
Subjt:  STVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL

AT5G18080.1 SAUR-like auxin-responsive protein family2.5e-2672.86Show/hide
Query:  SSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL
        + S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+EEEFGFDHPMGGLTIPC ED F  VTSRL
Subjt:  SSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCAAATCCACTCCCTTCTACTTCTCTCTTGTCAAATTAGACACCACATTTTGTCTGAGTTTTTTCTTTGCCTCTGTTTCCTTCTATCCTTGGGGTCTATATCCAT
ACCAAACTCTCCACAGACCGCCCCCATCTTTGAATATACCGAATACCGGTGTCCCAACCATGTCCTTAATCCAAGGTCCCAAATCTTAGCTGCAAGTTGGAAGACAATTC
CATGTGCTATTCATAATCCATTTCCCAACTCCGTTTGCCTCTTCACCACTCAAAAGACTTCAAAGGATAAAAAAAAAAGATCACTGCAATTCTCACCTATATATACAACA
CACCAATTCTCTCATCTCAGAATCACAAAAACAAACCAACCCAGATCTTCATTCAGAGCTCAAAATCACCCTCTAAAGCCAAAAATCAAAACAACCCACAAAATCAAATT
TCTCAAGATACATACCATGGGATTCCGTTTAAACAGCCCAAGGAAATCATCATCGACTGTACCAAAGGGGTTTTTCGCCGTCTACGTTGGAGAGACACAAAAGAGACGAC
ATGTGATTCCGATTTCTTACTTGAAGCATCCATCGTTTCAAGATTTGTTGAGTAAAGCTGAAGAAGAGTTTGGATTCGATCATCCAATGGGGGGCTTAACGATCCCTTGC
AATGAAGATGTGTTCTTCGAAGTCACTTCTCGCTTGGCTAATTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCCAAATCCACTCCCTTCTACTTCTCTCTTGTCAAATTAGACACCACATTTTGTCTGAGTTTTTTCTTTGCCTCTGTTTCCTTCTATCCTTGGGGTCTATATCCAT
ACCAAACTCTCCACAGACCGCCCCCATCTTTGAATATACCGAATACCGGTGTCCCAACCATGTCCTTAATCCAAGGTCCCAAATCTTAGCTGCAAGTTGGAAGACAATTC
CATGTGCTATTCATAATCCATTTCCCAACTCCGTTTGCCTCTTCACCACTCAAAAGACTTCAAAGGATAAAAAAAAAAGATCACTGCAATTCTCACCTATATATACAACA
CACCAATTCTCTCATCTCAGAATCACAAAAACAAACCAACCCAGATCTTCATTCAGAGCTCAAAATCACCCTCTAAAGCCAAAAATCAAAACAACCCACAAAATCAAATT
TCTCAAGATACATACCATGGGATTCCGTTTAAACAGCCCAAGGAAATCATCATCGACTGTACCAAAGGGGTTTTTCGCCGTCTACGTTGGAGAGACACAAAAGAGACGAC
ATGTGATTCCGATTTCTTACTTGAAGCATCCATCGTTTCAAGATTTGTTGAGTAAAGCTGAAGAAGAGTTTGGATTCGATCATCCAATGGGGGGCTTAACGATCCCTTGC
AATGAAGATGTGTTCTTCGAAGTCACTTCTCGCTTGGCTAATTGTTGA
Protein sequenceShow/hide protein sequence
MSQIHSLLLLSCQIRHHILSEFFLCLCFLLSLGSISIPNSPQTAPIFEYTEYRCPNHVLNPRSQILAASWKTIPCAIHNPFPNSVCLFTTQKTSKDKKKRSLQFSPIYTT
HQFSHLRITKTNQPRSSFRAQNHPLKPKIKTTHKIKFLKIHTMGFRLNSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPC
NEDVFFEVTSRLANC