; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G04960 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G04960
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionAuxin-responsive protein
Genome locationClcChr02:4253163..4253667
RNA-Seq ExpressionClc02G04960
SyntenyClc02G04960
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049684.1 auxin-responsive protein SAUR36-like [Cucumis melo var. makuwa]6.2e-4792.79Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES
        MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRR  ASDAP+DVPAGHVAICVGSS RRFVVRATYLNHPIFQ LLLQAEEEYGF NQGPLAIPC+ES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSR
        VFEEVLR+VSR
Subjt:  VFEEVLRTVSR

KAG6572078.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]3.1e-4690.09Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES
        MSTGIAKSNNIRRIVSIRQMLQRWR+KARVTASSR +G  D PSDVPAGHVA+CVGSS RRFVVRATYLNHPIF+ LLLQAEEEYGF NQGPLAIPCDES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSR
        VFEEVLRTVSR
Subjt:  VFEEVLRTVSR

XP_004144827.1 indole-3-acetic acid-induced protein ARG7 [Cucumis sativus]1.4e-4691.89Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES
        MSTGI KSNNIRRIVSIRQMLQRWRKKARVTASSRR+G  DAPSDVPAGHVAICVGSS RRFVVRATYLNHPIFQ LL QAEEEYGF NQGPLAIPC+ES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSR
        VFEEVLRTVSR
Subjt:  VFEEVLRTVSR

XP_008448020.1 PREDICTED: auxin-responsive protein SAUR36-like [Cucumis melo]1.8e-4691.89Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES
        MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRR  ASDAP+DVPAGHVAICVGSS RRFVVRAT+LNHPIFQ LLLQAEEEYGF NQGPLAIPC+ES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSR
        VFEEVLR+VSR
Subjt:  VFEEVLRTVSR

XP_038888410.1 indole-3-acetic acid-induced protein ARG7-like [Benincasa hispida]1.2e-5096.4Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES
        MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSG  DAPSDVPAGHVAICVGSS RRFVVRATYLNHPIFQ LLLQAEEEYGFTNQGPLAIPCDES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSR
        VFEEVLRTVSR
Subjt:  VFEEVLRTVSR

TrEMBL top hitse value%identityAlignment
A0A0A0K0H1 Uncharacterized protein6.7e-4791.89Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES
        MSTGI KSNNIRRIVSIRQMLQRWRKKARVTASSRR+G  DAPSDVPAGHVAICVGSS RRFVVRATYLNHPIFQ LL QAEEEYGF NQGPLAIPC+ES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSR
        VFEEVLRTVSR
Subjt:  VFEEVLRTVSR

A0A1S3BJN8 auxin-responsive protein SAUR36-like8.7e-4791.89Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES
        MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRR  ASDAP+DVPAGHVAICVGSS RRFVVRAT+LNHPIFQ LLLQAEEEYGF NQGPLAIPC+ES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSR
        VFEEVLR+VSR
Subjt:  VFEEVLRTVSR

A0A5D3CM24 Auxin-responsive protein SAUR36-like3.0e-4792.79Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES
        MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRR  ASDAP+DVPAGHVAICVGSS RRFVVRATYLNHPIFQ LLLQAEEEYGF NQGPLAIPC+ES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSR
        VFEEVLR+VSR
Subjt:  VFEEVLRTVSR

A0A6J1GKR4 auxin-induced protein 6B-like7.4e-4689.19Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES
        MSTGIAKSNNIRRIVSIRQMLQRWR+KARVTASSR +G  D PSDVPAGHVA+CVGSS RRFVVRATYLNHPIF+ LLLQAEEEYGF NQGPLAIPCDES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSR
        VFEEVLR VSR
Subjt:  VFEEVLRTVSR

A0A6J1I2L6 auxin-induced protein 6B-like4.3e-4689.19Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES
        MSTGI KSNNIRRIVSIRQMLQRWR+KARVTASSR +G  D PSDVPAGHVA+CVGSS RRFVVRATYLNHPIF+ LLLQAEEEYGF NQGPLAIPCDES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSR
        VFEEVLRTVSR
Subjt:  VFEEVLRTVSR

SwissProt top hitse value%identityAlignment
O64538 Auxin-responsive protein SAUR402.3e-1244.71Show/hide
Query:  SDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTVSRIFAAAATSTLRVVSSVS
        S VP+GHV + VG    RFVV A  LNHP+F  LL ++ +EYG+T +G L IPC+  VFE+V   V  + +  A  T  +++S+S
Subjt:  SDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTVSRIFAAAATSTLRVVSSVS

P32295 Indole-3-acetic acid-induced protein ARG78.7e-1243.59Show/hide
Query:  SRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTN-QGPLAIPCDESVFEEVLRTVS
        S R+ AS    D P G++A+ VG + +RFV+  ++LN P+FQ+LL QAEEE+G+ +  G L IPC E +F+ +   +S
Subjt:  SRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTN-QGPLAIPCDESVFEEVLRTVS

P33083 Auxin-induced protein 6B3.3e-1148Show/hide
Query:  ASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTN-QGPLAIPCDESVFEEV
        AS   + AS    DV  G++A+ VG   RRFV+  +YLN P FQ+LL QAEEE+G+ +  G L IPC E VF+ +
Subjt:  ASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTN-QGPLAIPCDESVFEEV

Q9SA49 Auxin-responsive protein SAUR411.9e-1151.56Show/hide
Query:  VPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTV
        VPAGHV + VG    RFVV A  +NHPIF  LL ++ +EYG+  +G L IPC   VFE V+ T+
Subjt:  VPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTV

Q9SGU2 Auxin-responsive protein SAUR711.5e-1151.56Show/hide
Query:  VPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTV
        VP GHV + VG    RFVV A  LNHP+F  LL Q+ +EYG+  QG L IPC   VFE +L ++
Subjt:  VPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTV

Arabidopsis top hitse value%identityAlignment
AT1G19840.1 SAUR-like auxin-responsive protein family3.4e-3563.96Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES
        M+  + K + IR IV +RQML+RWR KAR+++ SR       PSDVP+GHVA+CVGS  RRFVVRA+YLNHPI  NLL+QAEEE+GF NQGPL IPC+ES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSR
        VFEE +R +SR
Subjt:  VFEEVLRTVSR

AT1G75590.1 SAUR-like auxin-responsive protein family7.5e-3563.96Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES
        M+ G+ K + IR IV +RQML+RWR +AR+++S  R      PSDVP+GHVA+ VGSS RRFVVRATYLNHP+ +NLL+QAEEE+GF NQGPL IPC+ES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSR
        VFEE +R +SR
Subjt:  VFEEVLRTVSR

AT4G34750.1 SAUR-like auxin-responsive protein family3.6e-2953.51Show/hide
Query:  IAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEE
        + K+N I  +V IRQML++W+KKA + +S+     +D  SDVP GHVA+ VG + RR+VVRA +LNHPIF+ LL +AEEEYGF N GPLAIPCDES+FE+
Subjt:  IAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEE

Query:  VLRTVSRIFAAAAT
        ++  V+R  +++++
Subjt:  VLRTVSRIFAAAAT

AT4G34750.2 SAUR-like auxin-responsive protein family3.6e-2953.51Show/hide
Query:  IAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEE
        + K+N I  +V IRQML++W+KKA + +S+     +D  SDVP GHVA+ VG + RR+VVRA +LNHPIF+ LL +AEEEYGF N GPLAIPCDES+FE+
Subjt:  IAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEE

Query:  VLRTVSRIFAAAAT
        ++  V+R  +++++
Subjt:  VLRTVSRIFAAAAT

AT5G10990.1 SAUR-like auxin-responsive protein family7.1e-3359.84Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES
        M+ GI K + IR IV +RQML++WR KAR+ +S RRS     PSDVP+GHVA+ VG S RRFVV ATYLNHPI  NLL++AEEE+GF NQGPL IPC+ES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDES

Query:  VFEEVLRTVSRIFAAAATSTLR
        VFEE +R ++R      T  L+
Subjt:  VFEEVLRTVSRIFAAAATSTLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACCGGAATCGCTAAATCCAACAACATCCGCCGCATCGTTAGCATTCGCCAGATGCTGCAGCGGTGGCGCAAGAAGGCTCGTGTTACCGCCTCTTCTCGCCGCTC
CGGCGCCAGTGATGCTCCGTCTGATGTTCCGGCCGGTCACGTGGCGATCTGTGTAGGAAGCAGTTCTAGAAGGTTCGTCGTTCGAGCTACTTACTTGAACCATCCGATCT
TCCAAAACCTTCTCTTGCAAGCCGAAGAGGAGTACGGATTTACGAACCAAGGTCCTCTCGCGATTCCTTGTGACGAGTCGGTTTTCGAGGAGGTTCTTCGGACCGTTTCC
CGGATTTTCGCCGCCGCTGCCACGTCGACTCTCCGAGTAGTCTCCTCCGTGAGTCTCGGCCGTTGCTTTTTGATTTCGCCGATAAATCGGTTTGTTAGTAAGATGGAAAG
GGAACTAACTGAAGATTGCGACTCGGGCTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGACCGGAATCGCTAAATCCAACAACATCCGCCGCATCGTTAGCATTCGCCAGATGCTGCAGCGGTGGCGCAAGAAGGCTCGTGTTACCGCCTCTTCTCGCCGCTC
CGGCGCCAGTGATGCTCCGTCTGATGTTCCGGCCGGTCACGTGGCGATCTGTGTAGGAAGCAGTTCTAGAAGGTTCGTCGTTCGAGCTACTTACTTGAACCATCCGATCT
TCCAAAACCTTCTCTTGCAAGCCGAAGAGGAGTACGGATTTACGAACCAAGGTCCTCTCGCGATTCCTTGTGACGAGTCGGTTTTCGAGGAGGTTCTTCGGACCGTTTCC
CGGATTTTCGCCGCCGCTGCCACGTCGACTCTCCGAGTAGTCTCCTCCGTGAGTCTCGGCCGTTGCTTTTTGATTTCGCCGATAAATCGGTTTGTTAGTAAGATGGAAAG
GGAACTAACTGAAGATTGCGACTCGGGCTGGTGA
Protein sequenceShow/hide protein sequence
MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGASDAPSDVPAGHVAICVGSSSRRFVVRATYLNHPIFQNLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTVS
RIFAAAATSTLRVVSSVSLGRCFLISPINRFVSKMERELTEDCDSGW