; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G05080 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G05080
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr02:4398312..4406555
RNA-Seq ExpressionClc02G05080
SyntenyClc02G05080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1215692.1 hypothetical protein CJ030_MR4G009216 [Morella rubra]1.3e-1168.18Show/hide
Query:  MRASSAARFAFVRSRC---------FPLVGLGEGRGHFHREGFNPATGSPTATLLRLHPSRRPHRG
        MRA+SAARFAFV               L  +G  RGHFHREGFNPATGSPTATLLRLHPSRRPHRG
Subjt:  MRASSAARFAFVRSRC---------FPLVGLGEGRGHFHREGFNPATGSPTATLLRLHPSRRPHRG
KAG6621652.1 hypothetical protein I3842_Q006900 [Carya illinoinensis]3.5e-09100Show/hide
Query:  RGHFHREGFNPATGSPTATLLRLHPSRRPHRG
        RGHFHREGFNPATGSPTATLLRLHPSRRPHRG
Subjt:  RGHFHREGFNPATGSPTATLLRLHPSRRPHRG
KAG7529257.1 hypothetical protein ISN45_Un97g000400 [Arabidopsis thaliana x Arabidopsis arenosa]3.9e-0868.63Show/hide
Query:  ARFAFVRSRCFPLVGLGEGRGHFHREGFNPATGSPTATLLRLHPSRRPHRG
        AR  +V  +  P +G G+ R   HREGFNPATGSPTATLLRLHPSRRPHRG
Subjt:  ARFAFVRSRCFPLVGLGEGRGHFHREGFNPATGSPTATLLRLHPSRRPHRG
PWA96871.1 hypothetical protein CTI12_AA035380 [Artemisia annua]4.3e-0796.67Show/hide
Query:  GHFHREGFNPATGSPTATLLRLHPSRRPHR
        G+FHREGFNPATGSPTATLLRLHPSRRPHR
Subjt:  GHFHREGFNPATGSPTATLLRLHPSRRPHR
TYG73453.1 hypothetical protein ES288_D04G101900v1 [Gossypium darwinii]5.1e-0893.94Show/hide
Query:  GRGHFHREGFNPATGSPTATLLRLHPSRRPHRG
        GR HFHREGFNPA GSPTATLLRLHPSRRPHRG
Subjt:  GRGHFHREGFNPATGSPTATLLRLHPSRRPHRG
TrEMBL top hitse value%identityAlignment
A0A0U1YIU0 Uncharacterized protein1.3e-0489.29Show/hide
Query:  EGFNPATGSPTATLLRLHPSRRPHRGQT
        EGFNPA GSPTATLLRLHPSRRPHRG +
Subjt:  EGFNPATGSPTATLLRLHPSRRPHRGQT
A0A2U1QFT8 Uncharacterized protein2.1e-0796.67Show/hide
Query:  GHFHREGFNPATGSPTATLLRLHPSRRPHR
        G+FHREGFNPATGSPTATLLRLHPSRRPHR
Subjt:  GHFHREGFNPATGSPTATLLRLHPSRRPHR
A0A5D2CZN8 Uncharacterized protein2.5e-0893.94Show/hide
Query:  GRGHFHREGFNPATGSPTATLLRLHPSRRPHRG
        GR HFHREGFNPA GSPTATLLRLHPSRRPHRG
Subjt:  GRGHFHREGFNPATGSPTATLLRLHPSRRPHRG
A0A6A1VRU9 Uncharacterized protein6.3e-1268.18Show/hide
Query:  MRASSAARFAFVRSRC---------FPLVGLGEGRGHFHREGFNPATGSPTATLLRLHPSRRPHRG
        MRA+SAARFAFV               L  +G  RGHFHREGFNPATGSPTATLLRLHPSRRPHRG
Subjt:  MRASSAARFAFVRSRC---------FPLVGLGEGRGHFHREGFNPATGSPTATLLRLHPSRRPHRG
F6H2S2 Uncharacterized protein6.9e-1190Show/hide
Query:  PLVGLGEGRGHFHREGFNPATGSPTATLLRLHPSRRPHRG
        PL  L  GRGHFHREGFNPATGSPTATLLRLHPSRRPHRG
Subjt:  PLVGLGEGRGHFHREGFNPATGSPTATLLRLHPSRRPHRG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCGCTAGTAGCGCGGCTCGCTTCGCTTTTGTTAGGAGTAGGTGCTTCCCCTTAGTTGGGTTGGGGGAAGGAAGAGGGCATTTCCATCGCGAAGGATTCAATCCAGC
CACAGGTTCCCCTACGGCTACCTTGTTACGACTTCACCCCAGTCGAAGACCCCACCGTGGTCAAACGACCAATGGTGAGGCTAAGGAGATCAATTTAAAGCGAAGAGCCA
AGGCTGAAGGCCGAGGTCGAGAAGATCAAGTTGAAGCGAAGAGCCAAGTTGCCGCTCGGTTCCCGGAGGTTTCACCCTCAGAATCACGCTGTCTCTCGCCCAGGGTATCA
CTGTCTCCCGCGGGCTCTCGCTCTCTCGCTCAACTCACGCTCTCCCGCTCTCTCACTCTCACGCTCCCCCGCTCTCACACTCGGAATCACGCTCCCCCTCGCCAGGATCA
CGCTCTCACAATCTCGGGCTCTCGCTCTCGCTCAGAATCTCGTTCTCGACTGCGATTAACTGCTCGCCTGACCGTCAGTCGTCGGATCAGTAGTCGGATCAGTACTCCCA
AGTGGTTGGCGATTGCTTTAGTTCGTAGGGTTGGAGTAAACTGCGAGTTTGGCCACGTTCGGGGGAATTGTATTCCCAGTTTATTTAGGAATTTTGCAAGAGTTGCAGTG
TGCTTAGCTGTATGGATCAATCCTCAGGAGGTTGTGTTCCTTCCGGTTCATTGGAGGTTGTGTTCCTTCGGGATCACTAGAGGATGTGTTCCTTCGGGGGATAGGGGTCA
AACTGGGGACATTCCCCAAGTACCTATCTCGGGACGGGGTGGCGAAACCGATCAAAACTCTCTCCCCTTCGTTTTTCCTCTTGCCATTGATCGTTCATCGGCGACTCATC
TCTCCGTTACCTCTCCTCTATTCTTCACCCCTCGATTTGGAGCCTTTAAGAGGTTGATTATACGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGCGCTAGTAGCGCGGCTCGCTTCGCTTTTGTTAGGAGTAGGTGCTTCCCCTTAGTTGGGTTGGGGGAAGGAAGAGGGCATTTCCATCGCGAAGGATTCAATCCAGC
CACAGGTTCCCCTACGGCTACCTTGTTACGACTTCACCCCAGTCGAAGACCCCACCGTGGTCAAACGACCAATGGTGAGGCTAAGGAGATCAATTTAAAGCGAAGAGCCA
AGGCTGAAGGCCGAGGTCGAGAAGATCAAGTTGAAGCGAAGAGCCAAGTTGCCGCTCGGTTCCCGGAGGTTTCACCCTCAGAATCACGCTGTCTCTCGCCCAGGGTATCA
CTGTCTCCCGCGGGCTCTCGCTCTCTCGCTCAACTCACGCTCTCCCGCTCTCTCACTCTCACGCTCCCCCGCTCTCACACTCGGAATCACGCTCCCCCTCGCCAGGATCA
CGCTCTCACAATCTCGGGCTCTCGCTCTCGCTCAGAATCTCGTTCTCGACTGCGATTAACTGCTCGCCTGACCGTCAGTCGTCGGATCAGTAGTCGGATCAGTACTCCCA
AGTGGTTGGCGATTGCTTTAGTTCGTAGGGTTGGAGTAAACTGCGAGTTTGGCCACGTTCGGGGGAATTGTATTCCCAGTTTATTTAGGAATTTTGCAAGAGTTGCAGTG
TGCTTAGCTGTATGGATCAATCCTCAGGAGGTTGTGTTCCTTCCGGTTCATTGGAGGTTGTGTTCCTTCGGGATCACTAGAGGATGTGTTCCTTCGGGGGATAGGGGTCA
AACTGGGGACATTCCCCAAGTACCTATCTCGGGACGGGGTGGCGAAACCGATCAAAACTCTCTCCCCTTCGTTTTTCCTCTTGCCATTGATCGTTCATCGGCGACTCATC
TCTCCGTTACCTCTCCTCTATTCTTCACCCCTCGATTTGGAGCCTTTAAGAGGTTGATTATACGTTGA
Protein sequenceShow/hide protein sequence
MRASSAARFAFVRSRCFPLVGLGEGRGHFHREGFNPATGSPTATLLRLHPSRRPHRGQTTNGEAKEINLKRRAKAEGRGREDQVEAKSQVAARFPEVSPSESRCLSPRVS
LSPAGSRSLAQLTLSRSLTLTLPRSHTRNHAPPRQDHALTISGSRSRSESRSRLRLTARLTVSRRISSRISTPKWLAIALVRRVGVNCEFGHVRGNCIPSLFRNFARVAV
CLAVWINPQEVVFLPVHWRLCSFGITRGCVPSGDRGQTGDIPQVPISGRGGETDQNSLPFVFPLAIDRSSATHLSVTSPLFFTPRFGAFKRLIIR