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Clc02G05110 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G05110
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description30S ribosomal protein S31, mitochondrial
Genome locationClcChr02:4424762..4426486
RNA-Seq ExpressionClc02G05110
SyntenyClc02G05110
Gene Ontology termsGO:0032544 - plastid translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009536 - plastid (cellular component)
InterPro domainsIPR030826 - 30S ribosomal protein
IPR044695 - 30S ribosomal protein S31, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008448047.1 PREDICTED: 30S ribosomal protein S31, mitochondrial [Cucumis melo]2.2e-3894.32Show/hide
Query:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAMAQWCGAVARGV+AAERRSPSLTSSM VEGLVPILCGRGDKKTK+GKRFKGSYGNARPKKEKKI+RIKDKIEVP STPWPLPFKLI
Subjt:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

XP_011658557.1 30S ribosomal protein S31, mitochondrial [Cucumis sativus]3.8e-3895.45Show/hide
Query:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAMAQW GAVARGVMAAERRSPSLTSSM VEGLVPILCGRGDK+TK+GKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

XP_022933003.1 30S ribosomal protein S31, mitochondrial [Cucurbita moschata]1.3e-3896.59Show/hide
Query:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAM QWCGAVARGVMAAERRSPSLTSSM VEGLVPILCGRGDKKTKKGK FKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

XP_022952601.1 30S ribosomal protein S31, mitochondrial-like [Cucurbita moschata]1.2e-3694.19Show/hide
Query:  MAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAQWCGA+A+ VMAAERRSPSLTSSM VEGLVPILCGRGDKKTKKGK FKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

XP_038888313.1 30S ribosomal protein S31, mitochondrial [Benincasa hispida]8.5e-3895.45Show/hide
Query:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAMAQ CGA+ARGVMAAERRSPSLTSSM  EGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

TrEMBL top hitse value%identityAlignment
A0A0A0K141 30S ribosomal protein S31, mitochondrial1.9e-3895.45Show/hide
Query:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAMAQW GAVARGVMAAERRSPSLTSSM VEGLVPILCGRGDK+TK+GKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

A0A1S3BI88 30S ribosomal protein S31, mitochondrial1.1e-3894.32Show/hide
Query:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAMAQWCGAVARGV+AAERRSPSLTSSM VEGLVPILCGRGDKKTK+GKRFKGSYGNARPKKEKKI+RIKDKIEVP STPWPLPFKLI
Subjt:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

A0A5A7SX60 30S ribosomal protein S311.1e-3894.32Show/hide
Query:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAMAQWCGAVARGV+AAERRSPSLTSSM VEGLVPILCGRGDKKTK+GKRFKGSYGNARPKKEKKI+RIKDKIEVP STPWPLPFKLI
Subjt:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

A0A6J1F3E9 30S ribosomal protein S31, mitochondrial6.4e-3996.59Show/hide
Query:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAM QWCGAVARGVMAAERRSPSLTSSM VEGLVPILCGRGDKKTKKGK FKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

A0A6J1GKP4 30S ribosomal protein S31, mitochondrial-like6.0e-3794.19Show/hide
Query:  MAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAQWCGA+A+ VMAAERRSPSLTSSM VEGLVPILCGRGDKKTKKGK FKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

SwissProt top hitse value%identityAlignment
O80439 30S ribosomal protein S31, chloroplastic9.9e-0551.11Show/hide
Query:  ILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTP
        + CGRGD+KT KGKRF  S+GNARP+ + K  R  +++ VP + P
Subjt:  ILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTP

P47909 30S ribosomal protein S31, mitochondrial7.5e-2184.91Show/hide
Query:  ILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        + CGRGDKKTK+GKRFKGSYGNARPK+EKKI+RIKD++EVP STPWPLPFKLI
Subjt:  ILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

P47910 30S ribosomal protein S31, chloroplastic8.9e-0650Show/hide
Query:  GVMAAERRSPSLTSSMVVEGLVPIL-CGRGDKKTKKGKRFKGSYGNARPKKEKK
        GV  +   + SL+SS+     +P++ CGRGD+KT KGKRF  S+GNARPK + K
Subjt:  GVMAAERRSPSLTSSMVVEGLVPIL-CGRGDKKTKKGKRFKGSYGNARPKKEKK

Q9SJU8 30S ribosomal protein S31, mitochondrial8.6e-2560.2Show/hide
Query:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPI----------LCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MA  QWCGA+ R +M  +R S +L  S     L P           LCGRGDKKTKKGKRFKGSYGN+R KK+K I+RIKDK+E+P STPWPLPFKLI
Subjt:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPI----------LCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

Arabidopsis top hitse value%identityAlignment
AT2G21290.1 unknown protein6.1e-2660.2Show/hide
Query:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPI----------LCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MA  QWCGA+ R +M  +R S +L  S     L P           LCGRGDKKTKKGKRFKGSYGN+R KK+K I+RIKDK+E+P STPWPLPFKLI
Subjt:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPI----------LCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

AT2G38140.1 plastid-specific ribosomal protein 47.0e-0651.11Show/hide
Query:  ILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTP
        + CGRGD+KT KGKRF  S+GNARP+ + K  R  +++ VP + P
Subjt:  ILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGGCGCAGTGGTGCGGCGCTGTGGCTAGGGGAGTGATGGCGGCGGAGCGACGGTCTCCTTCTCTAACGTCGTCAATGGTGGTCGAAGGACTGGTGCCAATCCT
TTGTGGACGAGGTGACAAGAAGACGAAGAAAGGGAAAAGATTCAAAGGCTCGTACGGAAACGCCAGGCCGAAGAAGGAGAAGAAGATACAGCGAATCAAGGATAAAATTG
AGGTTCCTAGTTCCACTCCTTGGCCTCTTCCTTTCAAGCTTATCTGA
mRNA sequenceShow/hide mRNA sequence
CTTTCCAAAGACACTTCAATACCAATAGTTAGCTCCCTTTCGGCTCCTCTCCACTATAGTGGGTTCTGAACCAAATCCTGAAAACAGAGAAAAAAAATGGCGATGGCGCA
GTGGTGCGGCGCTGTGGCTAGGGGAGTGATGGCGGCGGAGCGACGGTCTCCTTCTCTAACGTCGTCAATGGTGGTCGAAGGACTGGTGCCAATCCTTTGTGGACGAGGTG
ACAAGAAGACGAAGAAAGGGAAAAGATTCAAAGGCTCGTACGGAAACGCCAGGCCGAAGAAGGAGAAGAAGATACAGCGAATCAAGGATAAAATTGAGGTTCCTAGTTCC
ACTCCTTGGCCTCTTCCTTTCAAGCTTATCTGATTTGAATCGCTTTTGTTTCCTTCTGATCGCATAAGACCTTCGTGATTTGTAATTTTGAAAAAGAATCAAGGTTTTCT
CGAGGTTTAGGGTTTATGTCATTTCAAGATGGATTTAAGCGAAATTGAAATTGATCTATATAGTGTTTAATCGTCTTGCTGGTGAGTTCGATTTCATATTTGACCGATTT
TTCTTCGAATGATATCTGAAAATTTTTTGGGGAAAGGAAGAATTATTTGGAGAGAATTAGATTCTGTAAATTTTATCATACTGAATCCGCAATTTAGGATTCAACAGCCT
GCAACTTCGTGATCGATTTGAGAAGCTTGAATTACAAATTTTGTTTAGATGGTTTGTTAAAATCTTCTTGCAATTGTGTATTTAGGTAGGGGCCCAGTGAAATATTAGAG
TTACATTATTAATATATATATTTCACTCACAAACACTTATTTAAGTATCTGGACGGATGAATGATCATCAGCTTCTGAAAGAAATCGATGAATTTTCCGTCAAAAATCCT
TGTAGATCTCCTATTTAGTGAATAGAATCAATAATTGATTTAACTCTTAAAAGTGTATACATTCAGTATAAAGAACACAAATCCTAATGATATGGGTGACATATTTCTTC
TTGATTGATGTTTAAAGTAAAAGAAAAATAAATAATGATAAATAAAATTTTAAAAAATCCATTATTAAAACAAAAACCTAACCATCAATTAGACTCATATGAAGTTTCAT
CAATAAATAGTGGAAAAAACTTCCATAAAAAAACCAATGTTATTATTCAGTAAAGAAAACAAAACAATGAATTTAACCATGAATTCAACTAAACGTCAACATAGTTCAAA
TTTAGATGGATCTCTGTTCGATAGTTATTGTAGTCGGGATAAGCATGCACGAACTTTCGTATAGTGCCCTAGTTTTTTAGTCGAGATGTGTTAACAACAACGAACAACGA
AGTTCATGGGTTTGAATCCTTCATCCCTACTCTATTAAAAAAGAACTAAACATCAAGTTTCATTTTGTCATTATGTTGTGTCATCACCATTGTTCACTTCTTGTCATCGT
TTGTCAACCGCAACCGTCGTTCGTCAGCTAATAATTACAAATTGTAACAACCCTCCTTACACAAAACATGTGCAATCCACCTAATTACAATAACAACCCTCCTTACAAAA
TTTCCAACGAGGGTCATTACTTCATGATTGTAAGTCTAAAACAAAAGATTTCGTCATTTAAAGTAAAAGTTAATTTAAACAAGCATTACAATTTCAAATCAATTTATAAA
AATAATTAAATAGATATATACTTTTGTCGAGGTTCTGTTAAAATGGTCGTGAAAATAATGTTCGAAACAAAAAAA
Protein sequenceShow/hide protein sequence
MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI