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Clc02G05470 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G05470
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr02:5024638..5025114
RNA-Seq ExpressionClc02G05470
SyntenyClc02G05470
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036627.1 hypothetical protein E6C27_scaffold191G001550 [Cucumis melo var. makuwa]1.7e-1652.54Show/hide
Query:  MLIFVGVLVISTNLIEITKAIRSISYIGAPQGGVEVVCSPEDPRVYNLNYANQEPSEFNDVDGCRPQKDHQHNINGDGLG--------NMAPQSP-----
        M++ VGVL+IST LIEITKA   I   GAPQ GVE+VCSPEDPRV+ L+YAN E SEFN VD C   K    N+N  G          N+APQSP     
Subjt:  MLIFVGVLVISTNLIEITKAIRSISYIGAPQGGVEVVCSPEDPRVYNLNYANQEPSEFNDVDGCRPQKDHQHNINGDGLG--------NMAPQSP-----

Query:  -----KEDKSIVTSLPYM
             K  K++VT LPYM
Subjt:  -----KEDKSIVTSLPYM

KAE8646139.1 hypothetical protein Csa_016560, partial [Cucumis sativus]4.6e-1762.11Show/hide
Query:  MGIFKKNMLIFVGVLVISTNLIEITKA--IRSISYIGAPQGGVEVVCSPEDPRVYNLNYANQEPSEFNDVDGCRPQKDHQHNINGDGLGNMAPQS
        MGI KKNML+FVGVL+IST LIEITKA   R+  Y G    GVE+VCSPEDPRV+ L+YAN E SE+N VD C+  K  + N NG    NMAPQS
Subjt:  MGIFKKNMLIFVGVLVISTNLIEITKA--IRSISYIGAPQGGVEVVCSPEDPRVYNLNYANQEPSEFNDVDGCRPQKDHQHNINGDGLGNMAPQS

TrEMBL top hitse value%identityAlignment
A0A0A0K4C8 Uncharacterized protein1.3e-1758.1Show/hide
Query:  MGIFKKNMLIFVGVLVISTNLIEITKA-IRSISYIGAPQGGVEVVCSPEDPRVYNLNYANQEPSEFNDVDGCRPQKDHQHNINGDGLG-NMAPQSPKEDK
        M I KKNM +FVG+L+IST LIEITKA  RS++Y GAPQ GVE+VCSPEDPRV+ L+YAN E SE+N VD C   K    N+N DG   N+  QSP ++ 
Subjt:  MGIFKKNMLIFVGVLVISTNLIEITKA-IRSISYIGAPQGGVEVVCSPEDPRVYNLNYANQEPSEFNDVDGCRPQKDHQHNINGDGLG-NMAPQSPKEDK

Query:  SIVTS
        +  TS
Subjt:  SIVTS

A0A0A0K7P8 Uncharacterized protein2.2e-1762.11Show/hide
Query:  MGIFKKNMLIFVGVLVISTNLIEITKA--IRSISYIGAPQGGVEVVCSPEDPRVYNLNYANQEPSEFNDVDGCRPQKDHQHNINGDGLGNMAPQS
        MGI KKNML+FVGVL+IST LIEITKA   R+  Y G    GVE+VCSPEDPRV+ L+YAN E SE+N VD C+  K  + N NG    NMAPQS
Subjt:  MGIFKKNMLIFVGVLVISTNLIEITKA--IRSISYIGAPQGGVEVVCSPEDPRVYNLNYANQEPSEFNDVDGCRPQKDHQHNINGDGLGNMAPQS

A0A5D3BWB1 Uncharacterized protein8.4e-1752.54Show/hide
Query:  MLIFVGVLVISTNLIEITKAIRSISYIGAPQGGVEVVCSPEDPRVYNLNYANQEPSEFNDVDGCRPQKDHQHNINGDGLG--------NMAPQSP-----
        M++ VGVL+IST LIEITKA   I   GAPQ GVE+VCSPEDPRV+ L+YAN E SEFN VD C   K    N+N  G          N+APQSP     
Subjt:  MLIFVGVLVISTNLIEITKAIRSISYIGAPQGGVEVVCSPEDPRVYNLNYANQEPSEFNDVDGCRPQKDHQHNINGDGLG--------NMAPQSP-----

Query:  -----KEDKSIVTSLPYM
             K  K++VT LPYM
Subjt:  -----KEDKSIVTSLPYM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATCTTCAAGAAAAACATGTTGATTTTTGTTGGTGTTCTTGTTATTAGCACAAACCTAATTGAAATTACAAAAGCAATTAGATCCATCAGTTATATTGGAGCTCC
TCAAGGTGGTGTGGAGGTTGTATGTAGTCCAGAAGATCCAAGAGTTTACAACCTGAATTATGCTAACCAAGAACCAAGTGAATTCAATGATGTTGATGGTTGCAGACCTC
AAAAAGATCATCAACATAACATCAATGGTGATGGATTGGGAAATATGGCTCCTCAAAGCCCAAAAGAAGATAAAAGTATTGTTACTTCTCTACCATATATGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATTGTCCTTAAACTCAGAAACAAAAAGCAAGCAATTGTAGTTACGAGAAGCACTTTATCATATCTACTTATGGGTATCTTCAAGAAAAACATGTTGATTTTTGTTGGTGT
TCTTGTTATTAGCACAAACCTAATTGAAATTACAAAAGCAATTAGATCCATCAGTTATATTGGAGCTCCTCAAGGTGGTGTGGAGGTTGTATGTAGTCCAGAAGATCCAA
GAGTTTACAACCTGAATTATGCTAACCAAGAACCAAGTGAATTCAATGATGTTGATGGTTGCAGACCTCAAAAAGATCATCAACATAACATCAATGGTGATGGATTGGGA
AATATGGCTCCTCAAAGCCCAAAAGAAGATAAAAGTATTGTTACTTCTCTACCATATATGAATTAAATTCATGTGGAAAGTCCATTCTCTTTTTGTTTTTTAAAAGGATT
CTTTGCTTGTTGTCTTATCCCCATATAAATTGCAATG
Protein sequenceShow/hide protein sequence
MGIFKKNMLIFVGVLVISTNLIEITKAIRSISYIGAPQGGVEVVCSPEDPRVYNLNYANQEPSEFNDVDGCRPQKDHQHNINGDGLGNMAPQSPKEDKSIVTSLPYMN