CuGenDBv2

Gene ID	Clc02G05570
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Ras-related protein Rab7
Genome location	ClcChr02:5113604..5117015
RNA-Seq Expression	Clc02G05570
Synteny	Clc02G05570
Gene Ontology terms	GO:0005774 - vacuolar membrane (cellular component) GO:0003924 - GTPase activity (molecular function) GO:0005525 - GTP binding (molecular function)
InterPro domains	IPR001806 - Small GTPase IPR005225 - Small GTP-binding protein domain IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

NP_001269169.1 ras-related protein Rab-7b [Cucumis sativus]

2.2e-113

98.54

Show/hide

Query:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN
        MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFD+LN
Subjt:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN

Query:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR
        NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDV  NNQPR
Subjt:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR

Query:  SSGCDC
        SSGCDC
Subjt:  SSGCDC

XP_022952328.1 ras-related protein Rab7 [Cucurbita moschata]

3.8e-113

98.06

Show/hide

Query:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN
        MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFD+LN
Subjt:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN

Query:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR
        NWREEFLIQASPSDPENFPFVVLGNKVD+DGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF+CIAKNALKSGEEEEIYLPDTIDVA NNQPR
Subjt:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR

Query:  SSGCDC
        SSGCDC
Subjt:  SSGCDC

XP_022971474.1 ras-related protein Rab7-like [Cucurbita maxima]

1.4e-112

98.06

Show/hide

Query:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN
        MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFD+LN
Subjt:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN

Query:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR
        NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCA KGNIPYFETSAKEGINVEEAF+CIAKNALKSGEEEEIYLPDTIDVA NNQPR
Subjt:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR

Query:  SSGCDC
        SSGCDC
Subjt:  SSGCDC

XP_038692113.1 ras-related protein Rab7 [Tripterygium wilfordii]

8.5e-113

98.06

Show/hide

Query:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN
        MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFD+LN
Subjt:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN

Query:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR
        NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVA NNQPR
Subjt:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR

Query:  SSGCDC
        S+GC+C
Subjt:  SSGCDC

XP_038888926.1 ras-related protein Rab7 [Benincasa hispida]

6.5e-113

98.06

Show/hide

Query:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN
        MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFD+LN
Subjt:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN

Query:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR
        NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDV  NNQPR
Subjt:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR

Query:  SSGCDC
        SSGC+C
Subjt:  SSGCDC

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BGG2 LOW QUALITY PROTEIN: ras-related protein Rab7-like

1.1e-113

98.54

Show/hide

Query:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN
        MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFD+LN
Subjt:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN

Query:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR
        NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDV  NNQPR
Subjt:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR

Query:  SSGCDC
        SSGCDC
Subjt:  SSGCDC

A0A5D3DGZ7 Ras-related protein Rab7

1.1e-113

98.54

Show/hide

Query:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN
        MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFD+LN
Subjt:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN

Query:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR
        NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDV  NNQPR
Subjt:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR

Query:  SSGCDC
        SSGCDC
Subjt:  SSGCDC

A0A6J1C3F7 ras-related protein Rab7

1.1e-113

98.54

Show/hide

Query:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN
        MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFD+LN
Subjt:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN

Query:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR
        NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDV  NNQPR
Subjt:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR

Query:  SSGCDC
        SSGCDC
Subjt:  SSGCDC

A0A6J1I650 ras-related protein Rab7

1.8e-113

98.06

Show/hide

Query:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN
        MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFD+LN
Subjt:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN

Query:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR
        NWREEFLIQASPSDPENFPFVVLGNKVD+DGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF+CIAKNALKSGEEEEIYLPDTIDVA NNQPR
Subjt:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR

Query:  SSGCDC
        SSGCDC
Subjt:  SSGCDC

Q6UNT4 Putative GTP-binding protein

1.1e-113

98.54

Show/hide

Query:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN
        MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFD+LN
Subjt:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN

Query:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR
        NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDV  NNQPR
Subjt:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR

Query:  SSGCDC
        SSGCDC
Subjt:  SSGCDC

SwissProt top hits

e value

%identity

Alignment

O24461 Ras-related protein Rab7

1.4e-105

89.86

Show/hide

Query:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN
        M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSF++LN
Subjt:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN

Query:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVA-GNNQP
        NWREEFLIQA+PSDPENFPFVVLGNK+DVDGGNSRVVSEKKA+AWCASKGNIPYFETSAKEG NV++AFQCIAKNAL +  EEEIYLPDTIDVA G  Q 
Subjt:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVA-GNNQP

Query:  RSSGCDC
        RSSGC+C
Subjt:  RSSGCDC

P31022 Ras-related protein Rab7

1.1e-110

92.23

Show/hide

Query:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN
        MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNS+KSFD+LN
Subjt:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN

Query:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR
        NWREEFLIQA+PSDPENFPFVV+GNK+D+DGGNSRVVSEKKARAWCA+KGNIPYFETSAKEGINVEEAFQ IAK+ALKSGEEEE+YLPDTIDV  ++QPR
Subjt:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR

Query:  SSGCDC
        S+GC+C
Subjt:  SSGCDC

Q40787 Ras-related protein Rab7

8.0e-106

90.73

Show/hide

Query:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN
        M SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFD+LN
Subjt:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN

Query:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQ-P
        NWREEFLIQASPSDP+NFPFV+LGNKVDVDGGNSRVVSEKKA+AWCASKGNIPYFETSAKEG NVE+AFQCI KNALK+  EEE+Y+PDT+DV G N+  
Subjt:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQ-P

Query:  RSSGC
        RSSGC
Subjt:  RSSGC

Q9LS94 Ras-related protein RABG3f

2.7e-109

92.23

Show/hide

Query:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN
        MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSF++LN
Subjt:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN

Query:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR
        NWREEFLIQASPSDPENFPFV++GNKVDVD GNSRVVSEKKA+AWCASKGNIPYFETSAK G NVEEAFQCIAK+ALKSGEEEE+YLPDTIDV  +NQ R
Subjt:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR

Query:  SSGCDC
        S+GC+C
Subjt:  SSGCDC

Q9XI98 Ras-related protein RABG3e

3.6e-106

89.32

Show/hide

Query:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN
        MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNS KSF+ LN
Subjt:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN

Query:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR
        NWREEFLIQASPSDPENFPFVV+GNK+DVDGG+SRVVSEKKARAWCASKGNIPY+ETSAK G NVE+AF CI  NA+KSGEEEE+YLPDTIDV  +N  R
Subjt:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR

Query:  SSGCDC
        S+GC+C
Subjt:  SSGCDC

Arabidopsis top hits

e value

%identity

Alignment

AT1G49300.1 RAB GTPase homolog G3E

2.5e-107

89.32

Show/hide

Query:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN
        MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNS KSF+ LN
Subjt:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN

Query:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR
        NWREEFLIQASPSDPENFPFVV+GNK+DVDGG+SRVVSEKKARAWCASKGNIPY+ETSAK G NVE+AF CI  NA+KSGEEEE+YLPDTIDV  +N  R
Subjt:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR

Query:  SSGCDC
        S+GC+C
Subjt:  SSGCDC

AT1G49300.2 RAB GTPase homolog G3E

2.5e-107

89.32

Show/hide

Query:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN
        MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNS KSF+ LN
Subjt:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN

Query:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR
        NWREEFLIQASPSDPENFPFVV+GNK+DVDGG+SRVVSEKKARAWCASKGNIPY+ETSAK G NVE+AF CI  NA+KSGEEEE+YLPDTIDV  +N  R
Subjt:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR

Query:  SSGCDC
        S+GC+C
Subjt:  SSGCDC

AT1G52280.1 RAB GTPase homolog G3D

4.5e-104

86.89

Show/hide

Query:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN
        M SRRR LLKVIILGDSGVGKTSLMNQ+VN+KFSNQYKATIGADFLTKEVQ +DR+FTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFD+LN
Subjt:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN

Query:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR
        NWREEFLIQASPSDPENFPFVVLGNK DVDGG SRVVSEKKA+AWCASKGNIPYFETSAKEG NV+ AF+CI KNA K+  EEE YLPDTIDVAG  Q R
Subjt:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR

Query:  SSGCDC
        S+GC+C
Subjt:  SSGCDC

AT3G16100.1 RAB GTPase homolog G3C

2.9e-103

85.44

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Query:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN
        M SRRR LLKVIILGDSGVGKTSLMNQ+VN+KFSNQYKATIGADFLTKEVQ +DR+FTLQIWDTAGQERFQSLGVAFYRGADCCVLV DVN MKSF++LN
Subjt:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN

Query:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR
        NWREEFLIQASPSDPENFPFVVLGNK DVDGG SRVV+EKKA++WCASKGNIPYFETSAK+G+NV+ AF+CIAKNALK+  EEE+YLPDTIDVAG  Q R
Subjt:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR

Query:  SSGCDC
        S+GC+C
Subjt:  SSGCDC

AT3G18820.1 RAB GTPase homolog G3F

1.9e-110

92.23

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Query:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN
        MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSF++LN
Subjt:  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLN

Query:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR
        NWREEFLIQASPSDPENFPFV++GNKVDVD GNSRVVSEKKA+AWCASKGNIPYFETSAK G NVEEAFQCIAK+ALKSGEEEE+YLPDTIDV  +NQ R
Subjt:  NWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPR

Query:  SSGCDC
        S+GC+C
Subjt:  SSGCDC

Sequences

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CDS sequence

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ATGCCTTCCCGCAGAAGGACCCTTTTGAAGGTCATCATCCTTGGGGATAGCGGGGTGGGGAAGACCTCTTTGATGAACCAATATGTGAATAAGAAGTTTAGTAATCAATA
CAAGGCCACCATTGGAGCTGATTTTTTGACTAAGGAGGTGCAATTTGAAGATAGACTTTTCACTTTGCAGATATGGGATACAGCAGGCCAGGAACGATTTCAAAGTCTTG
GTGTTGCTTTTTACCGAGGTGCTGATTGCTGTGTTCTGGTGTATGATGTCAATTCAATGAAATCATTTGACAGCCTTAACAACTGGCGGGAAGAATTCCTTATCCAGGCA
AGCCCTTCCGATCCAGAAAATTTTCCCTTCGTTGTTTTAGGAAATAAAGTTGATGTTGATGGTGGAAACAGTAGAGTTGTTTCAGAGAAAAAGGCACGAGCTTGGTGTGC
TTCAAAAGGAAATATCCCATACTTTGAAACTTCTGCCAAAGAAGGCATTAACGTAGAAGAAGCCTTCCAATGCATTGCCAAAAATGCCCTCAAGAGTGGGGAAGAGGAAG
AGATATACTTACCCGACACCATCGATGTTGCGGGCAACAATCAGCCAAGATCATCTGGATGCGACTGCTGA

mRNA sequence

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AGACATTTAATTAGCATAAAATAAAAAGAATGGACAAATGAATTGAAAAAATATTCATAGTTTTCCCATTCACAGATCACTCCAGCTTGGCTTCGGCTTCTGATCAGAGA
GAGAGAGACCAGAAACCTCTCTTCTTCATCAATTCTCTCTCTCTCTCTCACTCTCTTTCGATTTTCAACCGATTGAATTCATCGCTTTTCCCTTACGATGCCTTCCCGCA
GAAGGACCCTTTTGAAGGTCATCATCCTTGGGGATAGCGGGGTGGGGAAGACCTCTTTGATGAACCAATATGTGAATAAGAAGTTTAGTAATCAATACAAGGCCACCATT
GGAGCTGATTTTTTGACTAAGGAGGTGCAATTTGAAGATAGACTTTTCACTTTGCAGATATGGGATACAGCAGGCCAGGAACGATTTCAAAGTCTTGGTGTTGCTTTTTA
CCGAGGTGCTGATTGCTGTGTTCTGGTGTATGATGTCAATTCAATGAAATCATTTGACAGCCTTAACAACTGGCGGGAAGAATTCCTTATCCAGGCAAGCCCTTCCGATC
CAGAAAATTTTCCCTTCGTTGTTTTAGGAAATAAAGTTGATGTTGATGGTGGAAACAGTAGAGTTGTTTCAGAGAAAAAGGCACGAGCTTGGTGTGCTTCAAAAGGAAAT
ATCCCATACTTTGAAACTTCTGCCAAAGAAGGCATTAACGTAGAAGAAGCCTTCCAATGCATTGCCAAAAATGCCCTCAAGAGTGGGGAAGAGGAAGAGATATACTTACC
CGACACCATCGATGTTGCGGGCAACAATCAGCCAAGATCATCTGGATGCGACTGCTGAGTTAAATACACTGAATCACCTCTTATTCTATTTCATTCTCCAGTAAAGCAAA
CGTCTTTTATAAAAAGGTCGTACAGACTCAAGCATTTTATGCGTTCCTATTTGTACATTTTGGATTTGCATTCAAACGAGTCCTGTCATTATCAATTCAGTTGTGTTTGG
TCTTGCAAGTTGTGTTTACTGTCTTAGGTATATTCATTATCCGTCTGGTGTTTTGTGTCCCGAGCCTCATTTGTTGATGACAATCAGTTTGTCGCATAAGTTTATGTAAT
TCTTCTCTTTAGTGAACGTTTTTGTGATTCTTGTTTATTTGATAGGATTTTGGTTCCTCTGTTCATGCCTTGGATCTTGCTCCAATATATTTTAAATCTGCTGCCAGGAT
TGTTTATGTCAAGGTCGCTATTTTAATGCTTTATATTAAATTAATGTCGATTTGGAGACAGAAATTATAGAAAAACTCGAAGATTATTTATTGTTTCCTGAGATATGTTA
AGGGAAACTAGAAAAAGGGATCTATTGATCATTTAACTGGTTGATAT

Protein sequence

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MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDSLNNWREEFLIQA
SPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVAGNNQPRSSGCDC

Clc02G05570 (gene) of Watermelon (cordophanus) v2 genome