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Clc02G06243 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G06243
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description40S ribosomal protein S7
Genome locationClcChr02:5976834..5978168
RNA-Seq ExpressionClc02G06243
SyntenyClc02G06243
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0006412 - translation (biological process)
GO:0042274 - ribosomal small subunit biogenesis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0032040 - small-subunit processome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000554 - Ribosomal protein S7e


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584357.1 40S ribosomal protein S7, partial [Cucurbita argyrosperma subsp. sororia]6.9e-2184.38Show/hide
Query:  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA
        +DI+LPAEIVGK+TRYRVDGSK  KVFL+PKE NNTEYKLESFAAV RKL GKDVAFEFP+TEA
Subjt:  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA

XP_004137478.1 40S ribosomal protein S7 [Cucumis sativus]9.0e-2184.38Show/hide
Query:  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA
        +DI+LPAEIVGK+TRYRVDGSK  KVFL+PKE NNTEYKLESFAAV RKL GKDVAFEFP+TEA
Subjt:  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA

XP_008458552.1 PREDICTED: 40S ribosomal protein S7 [Cucumis melo]9.0e-2184.38Show/hide
Query:  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA
        +DI+LPAEIVGK+TRYRVDGSK  KVFL+PKE NNTEYKLESFAAV RKL GKDVAFEFP+TEA
Subjt:  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA

XP_021598517.1 40S ribosomal protein S7-like [Manihot esculenta]5.8e-2081.25Show/hide
Query:  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA
        +DI+LPAEIVGK+TRYR+DGSK  KVFL+PKE NNTEYKLE+FAAV RKL GKDV FEFPVTEA
Subjt:  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA

XP_022924227.1 40S ribosomal protein S7-like [Cucurbita moschata]6.9e-2184.38Show/hide
Query:  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA
        +DI+LPAEIVGK+TRYRVDGSK  KVFL+PKE NNTEYKLESFAAV RKL GKDVAFEFP+TEA
Subjt:  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA

TrEMBL top hitse value%identityAlignment
A0A0A0LSZ7 40S ribosomal protein S74.4e-2184.38Show/hide
Query:  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA
        +DI+LPAEIVGK+TRYRVDGSK  KVFL+PKE NNTEYKLESFAAV RKL GKDVAFEFP+TEA
Subjt:  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA

A0A1S3C8E2 40S ribosomal protein S74.4e-2184.38Show/hide
Query:  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA
        +DI+LPAEIVGK+TRYRVDGSK  KVFL+PKE NNTEYKLESFAAV RKL GKDVAFEFP+TEA
Subjt:  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA

A0A5D3BIV5 40S ribosomal protein S74.4e-2184.38Show/hide
Query:  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA
        +DI+LPAEIVGK+TRYRVDGSK  KVFL+PKE NNTEYKLESFAAV RKL GKDVAFEFP+TEA
Subjt:  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA

A0A6J1E8B6 40S ribosomal protein S73.3e-2184.38Show/hide
Query:  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA
        +DI+LPAEIVGK+TRYRVDGSK  KVFL+PKE NNTEYKLESFAAV RKL GKDVAFEFP+TEA
Subjt:  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA

A0A6J1KKI9 40S ribosomal protein S73.3e-2184.38Show/hide
Query:  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA
        +DI+LPAEIVGK+TRYRVDGSK  KVFL+PKE NNTEYKLESFAAV RKL GKDVAFEFP+TEA
Subjt:  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA

SwissProt top hitse value%identityAlignment
Q8LJU5 40S ribosomal protein S71.9e-1861.54Show/hide
Query:  INKDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTE
        I +D++ PAEIVGK+ RY +DG K  K+FL+PKE NNTEYKL++F++V R+LCGKDV F++P+TE
Subjt:  INKDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTE

Q949H0 40S ribosomal protein S71.3e-1966.15Show/hide
Query:  INKDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTE
        I +D++ PAEIVGK+ RYR+DG+K  K++L+PKE NNTEYKLE+F+AV R+LCGKDV FE+PV E
Subjt:  INKDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTE

Q9C514 40S ribosomal protein S7-13.2e-2164.2Show/hide
Query:  AKQADNLTL-----FINKDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA
        AK+  N TL      I  D++LPAEIVGK+TRYR+DG+K  KVFL+PKE NNTEYK+E+F+AV +KL GKDV FEFP+TEA
Subjt:  AKQADNLTL-----FINKDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA

Q9XET4 40S ribosomal protein S71.1e-1865.08Show/hide
Query:  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTE
        +D++ PAEIVGK+ RYR+DGSK  K+FL+P E NNTEYKL++F AV R+LCGKDV +E+PV E
Subjt:  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTE

Q9XH45 40S ribosomal protein S72.5e-1868.25Show/hide
Query:  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTE
        +D+  PAEIVGK+TRYRVDG+K  KV+LEPKE NNTEYKLE+   V RKL GKDV FE+PV +
Subjt:  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTE

Arabidopsis top hitse value%identityAlignment
AT1G48830.1 Ribosomal protein S7e family protein2.3e-2264.2Show/hide
Query:  AKQADNLTL-----FINKDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA
        AK+  N TL      I  D++LPAEIVGK+TRYR+DG+K  KVFL+PKE NNTEYK+E+F+AV +KL GKDV FEFP+TEA
Subjt:  AKQADNLTL-----FINKDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA

AT1G48830.2 Ribosomal protein S7e family protein2.3e-2264.2Show/hide
Query:  AKQADNLTL-----FINKDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA
        AK+  N TL      I  D++LPAEIVGK+TRYR+DG+K  KVFL+PKE NNTEYK+E+F+AV +KL GKDV FEFP+TEA
Subjt:  AKQADNLTL-----FINKDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA

AT3G02560.1 Ribosomal protein S7e family protein2.2e-1764.06Show/hide
Query:  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA
        +D+  PAEIVGK+TRYR+DG+K  KVFL+ K  N+TEYKLE+   V RKL GKDV FE+PV EA
Subjt:  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA

AT3G02560.2 Ribosomal protein S7e family protein2.2e-1764.06Show/hide
Query:  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA
        +D+  PAEIVGK+TRYR+DG+K  KVFL+ K  N+TEYKLE+   V RKL GKDV FE+PV EA
Subjt:  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA

AT5G16130.1 Ribosomal protein S7e family protein2.6e-1868.85Show/hide
Query:  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPV
        +D+  PAEIVGK+TRYR+DGSK  KVFL+ KE NNTEYKLE+   V RKL GKDV FE+PV
Subjt:  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACATCAACAGGAAGTGCATGAGAATCTCTAGCTTCCCGTACAAGTACATCAGACTCAAGAACCCACATTATATACTCAAGACTCAAGTTACTGATGCGAAGCAAGC
AGATAATTTAACTTTATTCATCAACAAAGATATTCTTTTGCCTGCAGAGATTGTGGGGAAACAAACCAGATACAGGGTTGACGGATCAAAAAACGAGAAGGTTTTCTTGG
AACCAAAGGAGTGGAACAACACCGAGTACAAGTTGGAGAGTTTCGCTGCAGTTTGCAGGAAGCTTTGTGGCAAAGATGTTGCCTTTGAGTTCCCAGTAACTGAGGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAACATCAACAGGAAGTGCATGAGAATCTCTAGCTTCCCGTACAAGTACATCAGACTCAAGAACCCACATTATATACTCAAGACTCAAGTTACTGATGCGAAGCAAGC
AGATAATTTAACTTTATTCATCAACAAAGATATTCTTTTGCCTGCAGAGATTGTGGGGAAACAAACCAGATACAGGGTTGACGGATCAAAAAACGAGAAGGTTTTCTTGG
AACCAAAGGAGTGGAACAACACCGAGTACAAGTTGGAGAGTTTCGCTGCAGTTTGCAGGAAGCTTTGTGGCAAAGATGTTGCCTTTGAGTTCCCAGTAACTGAGGCATAA
Protein sequenceShow/hide protein sequence
MNINRKCMRISSFPYKYIRLKNPHYILKTQVTDAKQADNLTLFINKDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA