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Clc02G06940 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G06940
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionTransposase
Genome locationClcChr02:7017302..7018772
RNA-Seq ExpressionClc02G06940
SyntenyClc02G06940
Gene Ontology termsGO:0008152 - metabolic process (biological process)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052392.1 putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]2.0e-1837.44Show/hide
Query:  RKTRGPTTMPEITRCSSQGDRKVVQYNDYGQPIGVNAAKLRSYIGSCVHFHVPITYATWKHVPNKIKEKILKMIQKKRHTIEKAAQMKIKTEMENIEA-E
        ++ RGPT M ++TR  S GD+KVV+YN+ G PIG N AKL+S+IG   H+HVPITY +WK VP ++K+KI   ++ K   I K   M  K E + ++   
Subjt:  RKTRGPTTMPEITRCSSQGDRKVVQYNDYGQPIGVNAAKLRSYIGSCVHFHVPITYATWKHVPNKIKEKILKMIQKKRHTIEKAAQMKIKTEMENIEA-E

Query:  EDESFKDVDTKPKMAMNPSCDHVLTRTSEKPECSDQPKGEGGLSKPDTGFDTTKSGPELERIQKNEIDEMV--KALYRRVEELEEKIRQQSRFPSNSDCG
        E  SF + +   +  +    D +LT+     E +   +G GG   P T F + K      +  K+E + +V  + L RRV ELE +IR     P ++  G
Subjt:  EDESFKDVDTKPKMAMNPSCDHVLTRTSEKPECSDQPKGEGGLSKPDTGFDTTKSGPELERIQKNEIDEMV--KALYRRVEELEEKIRQQSRFPSNSDCG

Query:  SCN
        SC+
Subjt:  SCN

KAA0053264.1 uncharacterized protein E6C27_scaffold102G00580 [Cucumis melo var. makuwa]5.0e-1754.22Show/hide
Query:  HIKFDYNRRKTRGPTTMPEITRCSSQGDRKVVQYNDYGQPIGVNAAKLRSYIGSCVHFHVPITYATWKHVPNKIKEKILKMIQ
        H++    +RK RGPT M ++TR  S+G+RK+V+YN+ G PIG N  KL S+IGSCVH+H+PI YATW  VP K+KEKI  +++
Subjt:  HIKFDYNRRKTRGPTTMPEITRCSSQGDRKVVQYNDYGQPIGVNAAKLRSYIGSCVHFHVPITYATWKHVPNKIKEKILKMIQ

XP_022148697.1 uncharacterized protein LOC111017298 [Momordica charantia]1.5e-6645.89Show/hide
Query:  AAHATNPLMSDYNLNISNTSHIKFDYNRRKTRGPTTMPEITRCSSQGDRKVVQYNDYGQPIGVNAAKLRSYIGSCVHFHVPITYATWKHVPNKIKEKILK
        AAHATNPLMS  N N   TS++K D N+++ RGPTTM EITRCSSQGDRKVV+YNDYGQPIGVN AKL+SYIGSCVH+HVPITY+TWK VPN  KEKI K
Subjt:  AAHATNPLMSDYNLNISNTSHIKFDYNRRKTRGPTTMPEITRCSSQGDRKVVQYNDYGQPIGVNAAKLRSYIGSCVHFHVPITYATWKHVPNKIKEKILK

Query:  MIQ-------------------------------------------------------------------------------------------------
        +IQ                                                                                                 
Subjt:  MIQ-------------------------------------------------------------------------------------------------

Query:  -----KKRHTIEKAAQM-KIKTEMENIEAEEDESFKDVDTKPKMAM--NPSCDHVLT-RTSEKPECSDQPKGEGGLSKPDTGFDTTKSGPELERIQKNEI
             KK    +KAA+M K + EMEN + EEDES KDVD K K+ M  NPSCD+V T R S + E SD+ KGEGGLSKP  GF TTK  P+ ER Q+ E 
Subjt:  -----KKRHTIEKAAQM-KIKTEMENIEAEEDESFKDVDTKPKMAM--NPSCDHVLT-RTSEKPECSDQPKGEGGLSKPDTGFDTTKSGPELERIQKNEI

Query:  DEMVKALYRRVEELEEKIRQQSRFPSNSDCGSCNEQHSEDEVLGPVNNWNLEK
        +E +K LYRR++ELEE+IR + + P  S+ GSC+EQHS++E+LGP NNWN +K
Subjt:  DEMVKALYRRVEELEEKIRQQSRFPSNSDCGSCNEQHSEDEVLGPVNNWNLEK

XP_031742166.1 uncharacterized protein LOC116404093 [Cucumis sativus]1.3e-1759.74Show/hide
Query:  NRRKTRGPTTMPEITRCSSQGDRKVVQYNDYGQPIGVNAAKLRSYIGSCVHFHVPITYATWKHVPNKIKEKILKMIQ
        + +K RGPT M +ITR SS+G R V+QYN+ GQPIG NA KL+S+IG+ V FHVPITY+TW  VP ++KEKI ++I+
Subjt:  NRRKTRGPTTMPEITRCSSQGDRKVVQYNDYGQPIGVNAAKLRSYIGSCVHFHVPITYATWKHVPNKIKEKILKMIQ

XP_031745071.1 uncharacterized protein LOC116405249 [Cucumis sativus]1.1e-1658.44Show/hide
Query:  NRRKTRGPTTMPEITRCSSQGDRKVVQYNDYGQPIGVNAAKLRSYIGSCVHFHVPITYATWKHVPNKIKEKILKMIQ
        +++K RGPT M +ITR SS+G R V+QYN+ GQPIG NA KL+S+IG+ V FHVPITY+TW  VP ++K KI ++I+
Subjt:  NRRKTRGPTTMPEITRCSSQGDRKVVQYNDYGQPIGVNAAKLRSYIGSCVHFHVPITYATWKHVPNKIKEKILKMIQ

TrEMBL top hitse value%identityAlignment
A0A5A7T7N8 Putative serine/threonine-protein kinase nek25.4e-1733.49Show/hide
Query:  RKTRGPTTMPEITRCSSQGDRKVVQYNDYGQPIGVNAAKLRSYIGSCVHFHVPITYATWKHVPNKIKEKILKMIQKK---------RHTIEKAAQMKIKT
        ++ RGPTTM ++TR  S GD+KVV+YN+ G PIG N AKL+S+IGS  H+HVPITY +WK VP ++K+KI   ++K+         R  + K A++  + 
Subjt:  RKTRGPTTMPEITRCSSQGDRKVVQYNDYGQPIGVNAAKLRSYIGSCVHFHVPITYATWKHVPNKIKEKILKMIQKK---------RHTIEKAAQMKIKT

Query:  EMENIEAEE-DESFKDVDTKPKMAMNPSCDHVLTRTSEKPECSDQPKGEGGLSKPDTGFDTTKSGPELERIQKNEIDEMV--KALYRRVEELEEKIRQQS
        + +N + ++       ++T          + VL +     E + + +G GG   P T F   K      +  K+E + +V  + L R+V ELE +I    
Subjt:  EMENIEAEE-DESFKDVDTKPKMAMNPSCDHVLTRTSEKPECSDQPKGEGGLSKPDTGFDTTKSGPELERIQKNEIDEMV--KALYRRVEELEEKIRQQS

Query:  RFPSNSDCGSCN
          P ++  G+C+
Subjt:  RFPSNSDCGSCN

A0A5A7UDE2 Uncharacterized protein2.4e-1754.22Show/hide
Query:  HIKFDYNRRKTRGPTTMPEITRCSSQGDRKVVQYNDYGQPIGVNAAKLRSYIGSCVHFHVPITYATWKHVPNKIKEKILKMIQ
        H++    +RK RGPT M ++TR  S+G+RK+V+YN+ G PIG N  KL S+IGSCVH+H+PI YATW  VP K+KEKI  +++
Subjt:  HIKFDYNRRKTRGPTTMPEITRCSSQGDRKVVQYNDYGQPIGVNAAKLRSYIGSCVHFHVPITYATWKHVPNKIKEKILKMIQ

A0A5D3CV54 Putative serine/threonine-protein kinase nek27.1e-1756Show/hide
Query:  RKTRGPTTMPEITRCSSQGDRKVVQYNDYGQPIGVNAAKLRSYIGSCVHFHVPITYATWKHVPNKIKEKILKMIQ
        ++ RGPTTM ++TR  S GD+KVV+YN+ G PIG N AKL+S+IGS  H+HVPITY +WK VP ++K+KI   ++
Subjt:  RKTRGPTTMPEITRCSSQGDRKVVQYNDYGQPIGVNAAKLRSYIGSCVHFHVPITYATWKHVPNKIKEKILKMIQ

A0A5D3D6M6 Putative serine/threonine-protein kinase nek29.9e-1937.44Show/hide
Query:  RKTRGPTTMPEITRCSSQGDRKVVQYNDYGQPIGVNAAKLRSYIGSCVHFHVPITYATWKHVPNKIKEKILKMIQKKRHTIEKAAQMKIKTEMENIEA-E
        ++ RGPT M ++TR  S GD+KVV+YN+ G PIG N AKL+S+IG   H+HVPITY +WK VP ++K+KI   ++ K   I K   M  K E + ++   
Subjt:  RKTRGPTTMPEITRCSSQGDRKVVQYNDYGQPIGVNAAKLRSYIGSCVHFHVPITYATWKHVPNKIKEKILKMIQKKRHTIEKAAQMKIKTEMENIEA-E

Query:  EDESFKDVDTKPKMAMNPSCDHVLTRTSEKPECSDQPKGEGGLSKPDTGFDTTKSGPELERIQKNEIDEMV--KALYRRVEELEEKIRQQSRFPSNSDCG
        E  SF + +   +  +    D +LT+     E +   +G GG   P T F + K      +  K+E + +V  + L RRV ELE +IR     P ++  G
Subjt:  EDESFKDVDTKPKMAMNPSCDHVLTRTSEKPECSDQPKGEGGLSKPDTGFDTTKSGPELERIQKNEIDEMV--KALYRRVEELEEKIRQQSRFPSNSDCG

Query:  SCN
        SC+
Subjt:  SCN

A0A6J1D4R5 uncharacterized protein LOC1110172987.5e-6745.89Show/hide
Query:  AAHATNPLMSDYNLNISNTSHIKFDYNRRKTRGPTTMPEITRCSSQGDRKVVQYNDYGQPIGVNAAKLRSYIGSCVHFHVPITYATWKHVPNKIKEKILK
        AAHATNPLMS  N N   TS++K D N+++ RGPTTM EITRCSSQGDRKVV+YNDYGQPIGVN AKL+SYIGSCVH+HVPITY+TWK VPN  KEKI K
Subjt:  AAHATNPLMSDYNLNISNTSHIKFDYNRRKTRGPTTMPEITRCSSQGDRKVVQYNDYGQPIGVNAAKLRSYIGSCVHFHVPITYATWKHVPNKIKEKILK

Query:  MIQ-------------------------------------------------------------------------------------------------
        +IQ                                                                                                 
Subjt:  MIQ-------------------------------------------------------------------------------------------------

Query:  -----KKRHTIEKAAQM-KIKTEMENIEAEEDESFKDVDTKPKMAM--NPSCDHVLT-RTSEKPECSDQPKGEGGLSKPDTGFDTTKSGPELERIQKNEI
             KK    +KAA+M K + EMEN + EEDES KDVD K K+ M  NPSCD+V T R S + E SD+ KGEGGLSKP  GF TTK  P+ ER Q+ E 
Subjt:  -----KKRHTIEKAAQM-KIKTEMENIEAEEDESFKDVDTKPKMAM--NPSCDHVLT-RTSEKPECSDQPKGEGGLSKPDTGFDTTKSGPELERIQKNEI

Query:  DEMVKALYRRVEELEEKIRQQSRFPSNSDCGSCNEQHSEDEVLGPVNNWNLEK
        +E +K LYRR++ELEE+IR + + P  S+ GSC+EQHS++E+LGP NNWN +K
Subjt:  DEMVKALYRRVEELEEKIRQQSRFPSNSDCGSCNEQHSEDEVLGPVNNWNLEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAGGATAATGCAGCTCATGCCACAAATCCTCTCATGAGTGATTACAATCTAAATATTTCTAACACATCTCATATCAAGTTCGATTACAACAGGAGGAAAACACG
TGGTCCAACTACAATGCCTGAAATTACTCGATGTAGTAGCCAGGGAGATAGAAAGGTAGTACAGTATAACGACTATGGACAACCAATTGGAGTGAATGCAGCAAAACTGA
GGAGTTACATTGGCTCTTGTGTCCATTTCCATGTCCCAATTACTTATGCTACTTGGAAACATGTACCTAACAAGATTAAAGAAAAGATTTTAAAGATGATTCAGAAAAAG
AGACATACTATTGAAAAAGCTGCTCAAATGAAAATAAAAACAGAGATGGAAAACATAGAAGCAGAGGAGGATGAGTCCTTCAAGGATGTTGATACTAAGCCTAAGATGGC
CATGAATCCTAGTTGTGATCATGTCTTGACTCGAACATCGGAGAAACCTGAATGCTCTGATCAACCAAAGGGAGAAGGAGGTTTGAGTAAACCCGACACAGGCTTTGACA
CAACAAAATCTGGTCCTGAACTAGAGAGAATTCAAAAGAACGAAATTGATGAGATGGTTAAAGCGTTATATCGACGTGTTGAGGAGTTGGAAGAGAAAATACGACAACAA
AGTCGATTTCCTTCCAATTCCGATTGTGGCAGTTGCAATGAGCAACATTCAGAAGACGAGGTATTGGGGCCTGTTAACAATTGGAACTTGGAAAAGGTGATCACATTCTT
TCCCAATTCTTCATCTTTCCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAGGATAATGCAGCTCATGCCACAAATCCTCTCATGAGTGATTACAATCTAAATATTTCTAACACATCTCATATCAAGTTCGATTACAACAGGAGGAAAACACG
TGGTCCAACTACAATGCCTGAAATTACTCGATGTAGTAGCCAGGGAGATAGAAAGGTAGTACAGTATAACGACTATGGACAACCAATTGGAGTGAATGCAGCAAAACTGA
GGAGTTACATTGGCTCTTGTGTCCATTTCCATGTCCCAATTACTTATGCTACTTGGAAACATGTACCTAACAAGATTAAAGAAAAGATTTTAAAGATGATTCAGAAAAAG
AGACATACTATTGAAAAAGCTGCTCAAATGAAAATAAAAACAGAGATGGAAAACATAGAAGCAGAGGAGGATGAGTCCTTCAAGGATGTTGATACTAAGCCTAAGATGGC
CATGAATCCTAGTTGTGATCATGTCTTGACTCGAACATCGGAGAAACCTGAATGCTCTGATCAACCAAAGGGAGAAGGAGGTTTGAGTAAACCCGACACAGGCTTTGACA
CAACAAAATCTGGTCCTGAACTAGAGAGAATTCAAAAGAACGAAATTGATGAGATGGTTAAAGCGTTATATCGACGTGTTGAGGAGTTGGAAGAGAAAATACGACAACAA
AGTCGATTTCCTTCCAATTCCGATTGTGGCAGTTGCAATGAGCAACATTCAGAAGACGAGGTATTGGGGCCTGTTAACAATTGGAACTTGGAAAAGGTGATCACATTCTT
TCCCAATTCTTCATCTTTCCAATAG
Protein sequenceShow/hide protein sequence
MEKDNAAHATNPLMSDYNLNISNTSHIKFDYNRRKTRGPTTMPEITRCSSQGDRKVVQYNDYGQPIGVNAAKLRSYIGSCVHFHVPITYATWKHVPNKIKEKILKMIQKK
RHTIEKAAQMKIKTEMENIEAEEDESFKDVDTKPKMAMNPSCDHVLTRTSEKPECSDQPKGEGGLSKPDTGFDTTKSGPELERIQKNEIDEMVKALYRRVEELEEKIRQQ
SRFPSNSDCGSCNEQHSEDEVLGPVNNWNLEKVITFFPNSSSFQ