; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G07080 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G07080
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionpumilio homolog 12-like
Genome locationClcChr02:7157730..7159157
RNA-Seq ExpressionClc02G07080
SyntenyClc02G07080
Gene Ontology termsGO:0006417 - regulation of translation (biological process)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001313 - Pumilio RNA-binding repeat
IPR011989 - Armadillo-like helical
IPR016024 - Armadillo-type fold
IPR033133 - Pumilio homology domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645845.1 hypothetical protein Csa_017253 [Cucumis sativus]2.6e-9571.02Show/hide
Query:  HRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPL
        HR+VV LIS L+YPCQQW I L M PHVLTLAKDF  GH+V++SCF N  P  NELI+LR+AQNC ELAR QA CCILQECIEYSN+ LRQL+EVLISPL
Subjt:  HRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPL

Query:  IQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVA
        IQDV +LS HPYGNYVIQ+MIQLDG NIG RII EL +KFV LSMDK+GSNVVEKCLSCCEG  + II+EILE N  ++L+QICTNQYGN+VVQT MS+A
Subjt:  IQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVA

Query:  KGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLRGKKKSKLQEF
        KG+  KLL + IKSHW  LQ H YG+NVI S + R KKK+KL ++
Subjt:  KGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLRGKKKSKLQEF

XP_008455521.1 PREDICTED: putative pumilio homolog 8, chloroplastic [Cucumis melo]2.2e-8670.29Show/hide
Query:  SNANANGRINNNNNYYYYLMTILKKLTTNDVHSLILDPLGNNFLLHLLQ--SSHQTFINHLLLSLIT-SSQHFLPPCLHHLGHRVVVKLISRLRYPCQQW
        SN +AN    N+N    +L ++L++LTT  +H +I+ PLGN FLLHLLQ    H TFINHLLLSL T S  HFLP  LH+LG+RVVV LIS L+YPCQQW
Subjt:  SNANANGRINNNNNYYYYLMTILKKLTTNDVHSLILDPLGNNFLLHLLQ--SSHQTFINHLLLSLIT-SSQHFLPPCLHHLGHRVVVKLISRLRYPCQQW

Query:  TIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQ
         IAL MSPHVLTLAKDFQGGH+V++SCF + SP PNELILLR+AQNC ELAR QAGCCILQECIEYSN+  RQLREVLI+PLI+D  +LS HPYGNYVIQ
Subjt:  TIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQ

Query:  YMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCL
        +MIQLDG NIGWR+I EL +KFV LSMDK+GSNVVEKC+
Subjt:  YMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCL

XP_015866393.2 pumilio homolog 12-like [Ziziphus jujuba]2.4e-4036.08Show/hide
Query:  NDVHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNL
        +++H L++   GN  +  L++  +   ++ +L+S+I++ Q F   C+   G RVV KL+  L+ P QQ+    A+S   + L K   G H V++ CF  L
Subjt:  NDVHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNL

Query:  SPPPNELILLRIAQNCFELARNQAGCCILQECIEYS-----NDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALS
        SP  N+ +L  +A NC E+A +++GCCILQ C+ Y+       +  + ++ L++ +I +   LS HPYGNYV+Q +I          I+ +L+ K+V+LS
Subjt:  SPPPNELILLRIAQNCFELARNQAGCCILQECIEYS-----NDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALS

Query:  MDKFGSNVVEKCL--SCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTK
        M+K GSNVVEKCL  S  E     I+ EI+   N    L +  + YGNYV Q+A+ V+ G  +  L R I  H   L SHP+GK V+   +
Subjt:  MDKFGSNVVEKCL--SCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTK

XP_022148742.1 pumilio homolog 12-like [Momordica charantia]6.1e-6850.87Show/hide
Query:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSP
        +H L+L PLGN+ +  L +  H+ FI  LLLSLI     FL  CLH LG + VVKL+ RL  P  Q   A+ +S H + LAK    GH VL +CF NLS 
Subjt:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSP

Query:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSN
          NE+ILL IA N  ELA+++ GCCIL  CI Y+      LR VL++PLIQ+  +LS H Y N+VIQ++I+LD ANIG R+I  L+NKFV L + K GS+
Subjt:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSN

Query:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLRGKKKS
        VVEKCL C E     II+EI+E  N+   +Q+ TNQYGNYV Q A+SVAKGEAY LL R IKS    L+ HPYG++V+ +   R ++ S
Subjt:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLRGKKKS

XP_022725062.1 putative pumilio homolog 8, chloroplastic [Durio zibethinus]7.0e-4034.15Show/hide
Query:  NDVHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNL
        +++H L++    N  +  L ++ +Q     LL  L+ S Q FL  C    G R V K + R+    Q+  +   + P  +TL  D   GH ++  CF   
Subjt:  NDVHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNL

Query:  SPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFG
        S    +L++  I ++C ++A +++GCC+LQ+C++++     + R+ L++ +  +   LS HPYGNYV+QY++ +   ++   II  L   +V LSM+K+G
Subjt:  SPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFG

Query:  SNVVEKCL-SCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLR
        SNVVEKCL    EG    II EI+   ++   L++  + YGNYVVQ+A+ V+KG+ +  L   I+ H+ +L SH +GK V+  TK R
Subjt:  SNVVEKCL-SCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLR

TrEMBL top hitse value%identityAlignment
A0A0A0K7S4 PUM-HD domain-containing protein2.8e-7171.73Show/hide
Query:  ELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVE
        +LI+LR+AQNC ELAR QA CCILQECIEYSN+ LRQL+EVLISPLIQDV +LS HPYGNYVIQ+MIQLDG NIG RII EL +KFV LSMDK+GSNVVE
Subjt:  ELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVE

Query:  KCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLRGKKKSKLQEF
        KCLSCCEG  + II+EILE N  ++L+QICTNQYGN+VVQT MS+AKG+  KLL + IKSHW  LQ H YG+NVI S + R KKK+KL ++
Subjt:  KCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLRGKKKSKLQEF

A0A1R3HUF5 PUM-HD domain-containing protein3.4e-4034.26Show/hide
Query:  NDVHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNL
        + +H L++    N  +  L ++ +Q     LL+ L+ + Q F+  C H  G R V K++  +  P Q   +   + P  + L K+   GH ++  C    
Subjt:  NDVHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNL

Query:  SPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL-DGANIGWRIINELKNKFVALSMDKF
        S    E ++  I ++C E+A +++GCC+LQ+C+  S +   + +E L+  +  +   LS HPYGNYV+Q+++ L +  ++   II +L+  +V LSM+K+
Subjt:  SPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL-DGANIGWRIINELKNKFVALSMDKF

Query:  GSNVVEKCLSCCEG--GFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLR
        GSNVVEKCL  CE    F  II EI+   N+++ L++  + +GNYVVQ+A+ V+KG+ Y      I+ H+ +L SH YGK V+  TK R
Subjt:  GSNVVEKCLSCCEG--GFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLR

A0A1S3C139 putative pumilio homolog 8, chloroplastic1.1e-8670.29Show/hide
Query:  SNANANGRINNNNNYYYYLMTILKKLTTNDVHSLILDPLGNNFLLHLLQ--SSHQTFINHLLLSLIT-SSQHFLPPCLHHLGHRVVVKLISRLRYPCQQW
        SN +AN    N+N    +L ++L++LTT  +H +I+ PLGN FLLHLLQ    H TFINHLLLSL T S  HFLP  LH+LG+RVVV LIS L+YPCQQW
Subjt:  SNANANGRINNNNNYYYYLMTILKKLTTNDVHSLILDPLGNNFLLHLLQ--SSHQTFINHLLLSLIT-SSQHFLPPCLHHLGHRVVVKLISRLRYPCQQW

Query:  TIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQ
         IAL MSPHVLTLAKDFQGGH+V++SCF + SP PNELILLR+AQNC ELAR QAGCCILQECIEYSN+  RQLREVLI+PLI+D  +LS HPYGNYVIQ
Subjt:  TIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQ

Query:  YMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCL
        +MIQLDG NIGWR+I EL +KFV LSMDK+GSNVVEKC+
Subjt:  YMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCL

A0A6J1D5W5 pumilio homolog 12-like2.9e-6850.87Show/hide
Query:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSP
        +H L+L PLGN+ +  L +  H+ FI  LLLSLI     FL  CLH LG + VVKL+ RL  P  Q   A+ +S H + LAK    GH VL +CF NLS 
Subjt:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSP

Query:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSN
          NE+ILL IA N  ELA+++ GCCIL  CI Y+      LR VL++PLIQ+  +LS H Y N+VIQ++I+LD ANIG R+I  L+NKFV L + K GS+
Subjt:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSN

Query:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLRGKKKS
        VVEKCL C E     II+EI+E  N+   +Q+ TNQYGNYV Q A+SVAKGEAY LL R IKS    L+ HPYG++V+ +   R ++ S
Subjt:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLRGKKKS

A0A6P3YS61 pumilio homolog 12-like1.2e-4036.08Show/hide
Query:  NDVHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNL
        +++H L++   GN  +  L++  +   ++ +L+S+I++ Q F   C+   G RVV KL+  L+ P QQ+    A+S   + L K   G H V++ CF  L
Subjt:  NDVHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNL

Query:  SPPPNELILLRIAQNCFELARNQAGCCILQECIEYS-----NDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALS
        SP  N+ +L  +A NC E+A +++GCCILQ C+ Y+       +  + ++ L++ +I +   LS HPYGNYV+Q +I          I+ +L+ K+V+LS
Subjt:  SPPPNELILLRIAQNCFELARNQAGCCILQECIEYS-----NDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALS

Query:  MDKFGSNVVEKCL--SCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTK
        M+K GSNVVEKCL  S  E     I+ EI+   N    L +  + YGNYV Q+A+ V+ G  +  L R I  H   L SHP+GK V+   +
Subjt:  MDKFGSNVVEKCL--SCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTK

SwissProt top hitse value%identityAlignment
P25339 Pumilio homology domain family member 42.0e-2930.74Show/hide
Query:  LILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPN
        L+ D  GN  +  LL+    T    ++L+ I SS HF+   L+  G R + KLI  ++   +   +  ++ P+ + L+KD  G H V++ C   L P   
Subjt:  LILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPN

Query:  ELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGW----RIINELKNKFVALSMDKFGS
        + I   I+ +C ++A ++ GCC+LQ C+++      +  + L   L+  VD L++ P+GNYV+QY+I  +     +    +I++ LK + + LS+ KFGS
Subjt:  ELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGW----RIINELKNKFVALSMDKFGS

Query:  NVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGE---AYKLLGRGIKSHWF-YLQSHPYGKNVI
        NV+EK L       + +I EIL N  E  +  +  + YGNYV+QTA+ ++  +    YK L   +       +++ P+GK +I
Subjt:  NVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGE---AYKLLGRGIKSHWF-YLQSHPYGKNVI

Q1PFN9 Pumilio homolog 91.0e-3033.22Show/hide
Query:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSS-QHFLPPCLHHLGHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLS
        V  L +DP GN  +  L   S +     L++S++TS+ +  +  CL+  G RVV K+I  ++   Q   +   + P  L L KD  G H V++SC   L 
Subjt:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSS-QHFLPPCLHHLGHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLS

Query:  PPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGS
        P  NE +L    + C E+A ++ GCC+LQ CI   ++ +   RE L++ + ++  +LS  P+GNYV+QY+I    + +  +++ + +  +  L+  KF S
Subjt:  PPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGS

Query:  NVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEA-YKLLGRGIKSHWFYLQSHPYGKNVIPSTKLR
        +V+EKCL         I+ E+L   N   LLQ   + Y NYV+QTA+SV KG    KL+ +  +  +  L S PY K +   T L+
Subjt:  NVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEA-YKLLGRGIKSHWFYLQSHPYGKNVIPSTKLR

Q9C9R6 Putative pumilio homolog 7, chloroplastic1.3e-3332.75Show/hide
Query:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSP
        V  L++DP GN  +  LL    +     ++L         +   L+  G RVV +L+  +R   Q   + LA+ P  L L KD  G H V++ C   LS 
Subjt:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSP

Query:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSN
          N+ I     + C E+A ++ GCC+LQ+CI YS   +RQ RE LI+ + ++   L+  P+GNY +Q++I+L   +    ++ +LK  +V LSM KF S+
Subjt:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSN

Query:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLR
        +VE+CL  C      I+ E++   + +QLLQ   + Y N+V+Q A++  KG  +  L   I+ H   L+++PY K +     L+
Subjt:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLR

Q9LDW3 Pumilio homolog 112.6e-2931.12Show/hide
Query:  ILKKLTTNDVHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVL
        I+ K   N+V  L  DP GN  +  L++  ++     +L+ L +     +   +++ G RVV KLI  +    Q   +  A+ P  L+L ++  G H +L
Subjt:  ILKKLTTNDVHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVL

Query:  RSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVA
         +C    SP  N+ IL    + C E+A  + GCC+LQ C+ YS   + +  E L+  + ++   L+  P+GNY++QY+I+      G  ++ EL+  +V 
Subjt:  RSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVA

Query:  LSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNV
        L+  KFGS+VVEKCL         I+ E++   N   LLQ   + Y NYV+Q A+S  KG     L   ++  +  L+  PY K +
Subjt:  LSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNV

Q9LM20 Putative pumilio homolog 8, chloroplastic3.3e-3230.28Show/hide
Query:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSP
        V  L++DP GN  +  LL   ++     ++L + +     +   L+  G RVV +L+  ++   Q   +  A+ P  L L +D  G H V++ C   LS 
Subjt:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSP

Query:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSN
          NE I     + C ++A ++ GCC+LQ+CI YS+      RE L++ + ++   L+  PYGNY +Q++++L   +    ++ +LK  +V LSM KF S+
Subjt:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSN

Query:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLR
        +VE+CL+ C      I+ E++   + + L+Q   + Y N+V+Q A++V KG  +  L   I+ H   L+++PY K +     L+
Subjt:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLR

Arabidopsis top hitse value%identityAlignment
AT1G22240.1 pumilio 82.3e-3330.28Show/hide
Query:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSP
        V  L++DP GN  +  LL   ++     ++L + +     +   L+  G RVV +L+  ++   Q   +  A+ P  L L +D  G H V++ C   LS 
Subjt:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSP

Query:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSN
          NE I     + C ++A ++ GCC+LQ+CI YS+      RE L++ + ++   L+  PYGNY +Q++++L   +    ++ +LK  +V LSM KF S+
Subjt:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSN

Query:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLR
        +VE+CL+ C      I+ E++   + + L+Q   + Y N+V+Q A++V KG  +  L   I+ H   L+++PY K +     L+
Subjt:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLR

AT1G35730.1 pumilio 97.4e-3233.22Show/hide
Query:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSS-QHFLPPCLHHLGHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLS
        V  L +DP GN  +  L   S +     L++S++TS+ +  +  CL+  G RVV K+I  ++   Q   +   + P  L L KD  G H V++SC   L 
Subjt:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSS-QHFLPPCLHHLGHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLS

Query:  PPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGS
        P  NE +L    + C E+A ++ GCC+LQ CI   ++ +   RE L++ + ++  +LS  P+GNYV+QY+I    + +  +++ + +  +  L+  KF S
Subjt:  PPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGS

Query:  NVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEA-YKLLGRGIKSHWFYLQSHPYGKNVIPSTKLR
        +V+EKCL         I+ E+L   N   LLQ   + Y NYV+QTA+SV KG    KL+ +  +  +  L S PY K +   T L+
Subjt:  NVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEA-YKLLGRGIKSHWFYLQSHPYGKNVIPSTKLR

AT1G78160.1 pumilio 79.4e-3532.75Show/hide
Query:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSP
        V  L++DP GN  +  LL    +     ++L         +   L+  G RVV +L+  +R   Q   + LA+ P  L L KD  G H V++ C   LS 
Subjt:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSP

Query:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSN
          N+ I     + C E+A ++ GCC+LQ+CI YS   +RQ RE LI+ + ++   L+  P+GNY +Q++I+L   +    ++ +LK  +V LSM KF S+
Subjt:  PPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSN

Query:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLR
        +VE+CL  C      I+ E++   + +QLLQ   + Y N+V+Q A++  KG  +  L   I+ H   L+++PY K +     L+
Subjt:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLR

AT4G08840.1 pumilio 111.8e-3031.12Show/hide
Query:  ILKKLTTNDVHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVL
        I+ K   N+V  L  DP GN  +  L++  ++     +L+ L +     +   +++ G RVV KLI  +    Q   +  A+ P  L+L ++  G H +L
Subjt:  ILKKLTTNDVHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVL

Query:  RSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVA
         +C    SP  N+ IL    + C E+A  + GCC+LQ C+ YS   + +  E L+  + ++   L+  P+GNY++QY+I+      G  ++ EL+  +V 
Subjt:  RSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVA

Query:  LSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNV
        L+  KFGS+VVEKCL         I+ E++   N   LLQ   + Y NYV+Q A+S  KG     L   ++  +  L+  PY K +
Subjt:  LSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNV

AT5G56510.1 pumilio 121.2e-2929.72Show/hide
Query:  NSNANANGRI---NNNNNYYYYLMTILKKLTTNDVH-----------SLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVK
        NS A A G+I     + +   +L  I  +   ND+             L++DP GN  +  LL+  ++     ++ S+       +       G R V K
Subjt:  NSNANANGRI---NNNNNYYYYLMTILKKLTTNDVH-----------SLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVK

Query:  LISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDN
        ++   +   +   I  A+   ++ L K+  G H V++ C   L P   + +      +C ELA ++ GCC+LQ+C+ YS  + +Q    L+S +  +   
Subjt:  LISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDN

Query:  LSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEAYK
        LS  P+GNYV+QY+ +L      + I+ +L+  +  LSM K  SNVVEKCL   +      I  I E  N  +L Q+  + YGNYV+Q A+  +KG  + 
Subjt:  LSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEAYK

Query:  LLGRGIKSHWFYLQSHPYGKNVI
        LL   IK +   L+++PYGK V+
Subjt:  LLGRGIKSHWFYLQSHPYGKNVI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATTTCTTGTCCAACTCTAATAATTCTAATGCTAATGCTAATGGTCGCATTAATAATAATAATAATTATTATTATTATTTAATGACCATTCTTAAAAAACTTAC
AACAAATGATGTTCATTCACTAATTCTTGACCCACTTGGAAACAACTTCCTTCTACATCTTCTTCAATCTTCCCATCAAACTTTCATTAATCATCTTCTTCTCTCCCTTA
TCACTTCATCACAACACTTCCTACCACCCTGTCTTCATCATCTCGGACATCGAGTCGTGGTGAAATTAATCTCTCGTTTGAGATACCCTTGTCAACAATGGACCATTGCA
TTGGCGATGAGTCCCCACGTCCTAACTTTGGCTAAAGACTTCCAAGGTGGCCATCAAGTGCTACGGAGCTGCTTCTACAATCTTTCTCCACCACCCAATGAGTTGATCTT
GCTTAGAATAGCACAAAATTGCTTTGAGCTGGCAAGAAATCAAGCTGGTTGCTGTATACTCCAAGAGTGCATTGAATATTCCAATGATAAATTAAGACAACTTCGAGAAG
TCCTCATATCCCCGTTGATACAAGATGTAGATAATCTTTCAATACATCCTTACGGGAATTATGTAATTCAATATATGATTCAATTGGATGGAGCAAACATAGGATGGAGG
ATAATCAATGAACTTAAAAACAAATTTGTCGCACTTTCTATGGACAAGTTTGGAAGCAATGTGGTGGAAAAATGTCTATCTTGTTGTGAAGGTGGCTTTGACTATATTAT
CTATGAAATTTTAGAGAATAACAATGAAAATCAACTCCTTCAAATTTGTACAAATCAATATGGCAATTATGTTGTCCAGACAGCCATGTCGGTGGCTAAGGGAGAAGCTT
ATAAGTTACTTGGAAGAGGCATTAAAAGCCATTGGTTTTATCTTCAATCTCATCCGTATGGAAAAAATGTGATTCCATCAACCAAATTACGTGGTAAAAAGAAGTCAAAA
TTACAAGAATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAATTTCTTGTCCAACTCTAATAATTCTAATGCTAATGCTAATGGTCGCATTAATAATAATAATAATTATTATTATTATTTAATGACCATTCTTAAAAAACTTAC
AACAAATGATGTTCATTCACTAATTCTTGACCCACTTGGAAACAACTTCCTTCTACATCTTCTTCAATCTTCCCATCAAACTTTCATTAATCATCTTCTTCTCTCCCTTA
TCACTTCATCACAACACTTCCTACCACCCTGTCTTCATCATCTCGGACATCGAGTCGTGGTGAAATTAATCTCTCGTTTGAGATACCCTTGTCAACAATGGACCATTGCA
TTGGCGATGAGTCCCCACGTCCTAACTTTGGCTAAAGACTTCCAAGGTGGCCATCAAGTGCTACGGAGCTGCTTCTACAATCTTTCTCCACCACCCAATGAGTTGATCTT
GCTTAGAATAGCACAAAATTGCTTTGAGCTGGCAAGAAATCAAGCTGGTTGCTGTATACTCCAAGAGTGCATTGAATATTCCAATGATAAATTAAGACAACTTCGAGAAG
TCCTCATATCCCCGTTGATACAAGATGTAGATAATCTTTCAATACATCCTTACGGGAATTATGTAATTCAATATATGATTCAATTGGATGGAGCAAACATAGGATGGAGG
ATAATCAATGAACTTAAAAACAAATTTGTCGCACTTTCTATGGACAAGTTTGGAAGCAATGTGGTGGAAAAATGTCTATCTTGTTGTGAAGGTGGCTTTGACTATATTAT
CTATGAAATTTTAGAGAATAACAATGAAAATCAACTCCTTCAAATTTGTACAAATCAATATGGCAATTATGTTGTCCAGACAGCCATGTCGGTGGCTAAGGGAGAAGCTT
ATAAGTTACTTGGAAGAGGCATTAAAAGCCATTGGTTTTATCTTCAATCTCATCCGTATGGAAAAAATGTGATTCCATCAACCAAATTACGTGGTAAAAAGAAGTCAAAA
TTACAAGAATTTTAA
Protein sequenceShow/hide protein sequence
MENFLSNSNNSNANANGRINNNNNYYYYLMTILKKLTTNDVHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISRLRYPCQQWTIA
LAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWR
IINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLRGKKKSK
LQEF