; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G07110 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G07110
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionPUM-HD domain-containing protein
Genome locationClcChr02:7227943..7231118
RNA-Seq ExpressionClc02G07110
SyntenyClc02G07110
Gene Ontology termsGO:0006417 - regulation of translation (biological process)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001313 - Pumilio RNA-binding repeat
IPR011989 - Armadillo-like helical
IPR016024 - Armadillo-type fold
IPR033133 - Pumilio homology domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645845.1 hypothetical protein Csa_017253 [Cucumis sativus]3.3e-7673.96Show/hide
Query:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL
        M PHVLTLAKDF  GH+V++SCF N  P  NELI+LR+AQNC ELAR QA CCILQECIEYSN+ LRQL+EVLISPLIQDV +LS HPYGNYVIQ+MIQL
Subjt:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL

Query:  DGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKSH
        DG NIG RII EL +KFV LSMDK+GSNVVEKCLSCCEG  + II+EILE N  ++L+QICTNQYGN+VVQT MS+AKG   +LLE+ IKSH
Subjt:  DGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKSH

KAF3443541.1 hypothetical protein FNV43_RR13227 [Rhamnella rubrinervis]4.6e-3038.78Show/hide
Query:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL
        +S  V+ L K    GH V++ C  N S   NE +L  +A NCFE+A +++GCC+LQ+CI+Y+     +LRE L++ +  +   L+   YGNYV+QY+++L
Subjt:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL

Query:  DGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCC-EGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKSHCKS
            I   ++ +LK  +  LS +K+GSNVVEKCL    +     I+ E++ + N + LL    + YGNYV+Q+A+SV+KG  H+ L+  +  HC S
Subjt:  DGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCC-EGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKSHCKS

KAF3446583.1 hypothetical protein FNV43_RR11763 [Rhamnella rubrinervis]4.6e-3038.78Show/hide
Query:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL
        +S  V+ L K    GH V++ C  N S   NE +L  +A NCFE+A +++GCC+LQ+CI+Y+     +LRE L++ +  +   L+   YGNYV+QY+++L
Subjt:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL

Query:  DGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCC-EGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKSHCKS
            I   ++ +LK  +  LS +K+GSNVVEKCL    +     I+ E++ + N + LL    + YGNYV+Q+A+SV+KG  H+ L+  +  HC S
Subjt:  DGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCC-EGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKSHCKS

XP_008455521.1 PREDICTED: putative pumilio homolog 8, chloroplastic [Cucumis melo]2.2e-5679.1Show/hide
Query:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL
        MSPHVLTLAKDFQGGH+V++SCF + SP PNELILLR+AQNC ELAR QAGCCILQECIEYSN+  RQLREVLI+PLI+D  +LS HPYGNYVIQ+MIQL
Subjt:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL

Query:  DGANIGWRIINELKNKFVALSMDKFGSNVVEKCL
        DG NIGWR+I EL +KFV LSMDK+GSNVVEKC+
Subjt:  DGANIGWRIINELKNKFVALSMDKFGSNVVEKCL

XP_022148742.1 pumilio homolog 12-like [Momordica charantia]8.7e-4554.45Show/hide
Query:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL
        +S H + LAK    GH VL +CF NLS   NE+ILL IA N  ELA+++ GCCIL  CI Y+      LR VL++PLIQ+  +LS H Y N+VIQ++I+L
Subjt:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL

Query:  DGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKS
        D ANIG R+I  L+NKFV L + K GS+VVEKCL C E     II+EI+E  N+   +Q+ TNQYGNYV Q A+SVAKG A+ LL R IKS
Subjt:  DGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKS

TrEMBL top hitse value%identityAlignment
A0A0A0K7S4 PUM-HD domain-containing protein2.2e-6275.16Show/hide
Query:  ELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVE
        +LI+LR+AQNC ELAR QA CCILQECIEYSN+ LRQL+EVLISPLIQDV +LS HPYGNYVIQ+MIQLDG NIG RII EL +KFV LSMDK+GSNVVE
Subjt:  ELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVE

Query:  KCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKSH
        KCLSCCEG  + II+EILE N  ++L+QICTNQYGN+VVQT MS+AKG   +LLE+ IKSH
Subjt:  KCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKSH

A0A1D1XXP3 Pumilio 125.0e-3042.19Show/hide
Query:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL
        + P +L L KD  G H V + C   LSP  ++ +      +C ELAR++ GCC+LQ+C+ + +    QLRE LIS +  +   LS  P+GNYVIQY+++L
Subjt:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL

Query:  DGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKSH
          A+    ++N+LK+ F  LSM K+ SNVVEKCL C     D  I  ILE     QLLQI  + YGNYV+Q+A+ + KG  H    + I+ H
Subjt:  DGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKSH

A0A1S3C139 putative pumilio homolog 8, chloroplastic1.1e-5679.1Show/hide
Query:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL
        MSPHVLTLAKDFQGGH+V++SCF + SP PNELILLR+AQNC ELAR QAGCCILQECIEYSN+  RQLREVLI+PLI+D  +LS HPYGNYVIQ+MIQL
Subjt:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL

Query:  DGANIGWRIINELKNKFVALSMDKFGSNVVEKCL
        DG NIGWR+I EL +KFV LSMDK+GSNVVEKC+
Subjt:  DGANIGWRIINELKNKFVALSMDKFGSNVVEKCL

A0A6J1D5W5 pumilio homolog 12-like4.2e-4554.45Show/hide
Query:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL
        +S H + LAK    GH VL +CF NLS   NE+ILL IA N  ELA+++ GCCIL  CI Y+      LR VL++PLIQ+  +LS H Y N+VIQ++I+L
Subjt:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL

Query:  DGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKS
        D ANIG R+I  L+NKFV L + K GS+VVEKCL C E     II+EI+E  N+   +Q+ TNQYGNYV Q A+SVAKG A+ LL R IKS
Subjt:  DGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKS

A0A6P3ZU94 putative pumilio homolog 8, chloroplastic isoform X22.5e-2938.86Show/hide
Query:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL
        + P  + L K    GH V++ C  N S   NE +L  +  NC+ +A +++GCC+LQ+CI+YS     +LRE+L++ ++ +   L+   YGNYV+QY++ L
Subjt:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL

Query:  DGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFD---YIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIK
            +   I+ +LK  F +LS +K+GSNVVEKCL     G D    II E++ + N + LL    + YGNYV+Q+A+SV+KG  H+ LE  ++
Subjt:  DGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFD---YIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIK

SwissProt top hitse value%identityAlignment
P25339 Pumilio homology domain family member 44.7e-2532.98Show/hide
Query:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL
        + P+ + L+KD  G H V++ C   L P   + I   I+ +C ++A ++ GCC+LQ C+++      +  + L   L+  VD L++ P+GNYV+QY+I  
Subjt:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL

Query:  DGANIGW----RIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLER
        +     +    +I++ LK + + LS+ KFGSNV+EK L       + +I EIL N  E  +  +  + YGNYV+QTA+ ++      L +R
Subjt:  DGANIGW----RIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLER

Q1PFN9 Pumilio homolog 92.0e-2336.31Show/hide
Query:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL
        + P  L L KD  G H V++SC   L P  NE +L    + C E+A ++ GCC+LQ CI   ++ +   RE L++ + ++  +LS  P+GNYV+QY+I  
Subjt:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL

Query:  DGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKG
          + +  +++ + +  +  L+  KF S+V+EKCL         I+ E+L   N   LLQ   + Y NYV+QTA+SV KG
Subjt:  DGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKG

Q9C9R6 Putative pumilio homolog 7, chloroplastic3.8e-2736.46Show/hide
Query:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL
        + P  L L KD  G H V++ C   LS   N+ I     + C E+A ++ GCC+LQ+CI YS   +RQ RE LI+ + ++   L+  P+GNY +Q++I+L
Subjt:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL

Query:  DGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKSH
           +    ++ +LK  +V LSM KF S++VE+CL  C      I+ E++   + +QLLQ   + Y N+V+Q A++  KG  H  L   I+ H
Subjt:  DGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKSH

Q9LM20 Putative pumilio homolog 8, chloroplastic5.5e-2633.85Show/hide
Query:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL
        + P  L L +D  G H V++ C   LS   NE I     + C ++A ++ GCC+LQ+CI YS+      RE L++ + ++   L+  PYGNY +Q++++L
Subjt:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL

Query:  DGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKSH
           +    ++ +LK  +V LSM KF S++VE+CL+ C      I+ E++   + + L+Q   + Y N+V+Q A++V KG+ H  L   I+ H
Subjt:  DGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKSH

Q9LVC3 Pumilio homolog 126.1e-2536.13Show/hide
Query:  VLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGAN
        ++ L K+  G H V++ C   L P   + +      +C ELA ++ GCC+LQ+C+ YS  + +Q    L+S +  +   LS  P+GNYV+QY+ +L    
Subjt:  VLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGAN

Query:  IGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKSHCKS
          + I+ +L+  +  LSM K  SNVVEKCL   +      I  I E  N  +L Q+  + YGNYV+Q A+  +KGN H LL   IK +  S
Subjt:  IGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKSHCKS

Arabidopsis top hitse value%identityAlignment
AT1G22240.1 pumilio 83.9e-2733.85Show/hide
Query:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL
        + P  L L +D  G H V++ C   LS   NE I     + C ++A ++ GCC+LQ+CI YS+      RE L++ + ++   L+  PYGNY +Q++++L
Subjt:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL

Query:  DGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKSH
           +    ++ +LK  +V LSM KF S++VE+CL+ C      I+ E++   + + L+Q   + Y N+V+Q A++V KG+ H  L   I+ H
Subjt:  DGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKSH

AT1G35730.1 pumilio 91.4e-2436.31Show/hide
Query:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL
        + P  L L KD  G H V++SC   L P  NE +L    + C E+A ++ GCC+LQ CI   ++ +   RE L++ + ++  +LS  P+GNYV+QY+I  
Subjt:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL

Query:  DGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKG
          + +  +++ + +  +  L+  KF S+V+EKCL         I+ E+L   N   LLQ   + Y NYV+QTA+SV KG
Subjt:  DGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKG

AT1G78160.1 pumilio 72.7e-2836.46Show/hide
Query:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL
        + P  L L KD  G H V++ C   LS   N+ I     + C E+A ++ GCC+LQ+CI YS   +RQ RE LI+ + ++   L+  P+GNY +Q++I+L
Subjt:  MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQL

Query:  DGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKSH
           +    ++ +LK  +V LSM KF S++VE+CL  C      I+ E++   + +QLLQ   + Y N+V+Q A++  KG  H  L   I+ H
Subjt:  DGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKSH

AT4G08840.1 pumilio 116.9e-2433.68Show/hide
Query:  PHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDG
        P  L+L ++  G H +L +C    SP  N+ IL    + C E+A  + GCC+LQ C+ YS   + +  E L+  + ++   L+  P+GNY++QY+I+   
Subjt:  PHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDG

Query:  ANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKSH
           G  ++ EL+  +V L+  KFGS+VVEKCL         I+ E++   N   LLQ   + Y NYV+Q A+S  KG     L   ++ +
Subjt:  ANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKSH

AT5G56510.1 pumilio 124.3e-2636.13Show/hide
Query:  VLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGAN
        ++ L K+  G H V++ C   L P   + +      +C ELA ++ GCC+LQ+C+ YS  + +Q    L+S +  +   LS  P+GNYV+QY+ +L    
Subjt:  VLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGAN

Query:  IGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKSHCKS
          + I+ +L+  +  LSM K  SNVVEKCL   +      I  I E  N  +L Q+  + YGNYV+Q A+  +KGN H LL   IK +  S
Subjt:  IGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKSHCKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCCCCACGTCCTAACTTTGGCTAAAGACTTCCAAGGTGGCCATCAAGTGCTACGGAGCTGCTTCTACAATCTTTCTCCACCACCCAATGAGTTGATCTTGCTTAG
AATAGCACAAAATTGCTTTGAGCTGGCAAGAAATCAAGCTGGTTGTTGTATACTCCAAGAGTGCATTGAATATTCCAATGATAAATTAAGACAACTTCGAGAAGTCCTCA
TATCCCCGTTGATACAAGATGTAGATAATCTTTCAATACATCCTTACGGGAATTATGTAATTCAATATATGATTCAATTGGATGGAGCAAACATAGGATGGAGGATAATC
AATGAACTTAAAAACAAATTTGTCGCACTTTCTATGGACAAGTTTGGAAGCAATGTGGTGGAAAAATGTCTATCTTGTTGTGAAGGTGGCTTTGACTATATTATCTATGA
AATTTTAGAGAATAACAATGAAAATCAACTCCTTCAAATTTGTACAAATCAATATGGCAATTATGTTGTCCAGACAGCCATGTCGGTGGCTAAGGGAAATGCTCATAGGT
TACTTGAAAGAACCATTAAGAGCCATTGCAAATCTAGAGAAGATTTGAAGAAGGTGAAGCTAGTTGTAAAAAATGAATTTGATATGAAGACTCTAGGTGTCGCCGCTCTA
TTTGATAGGCCTTTGTCGATCTATTGTCAACTGTGGCAAATCCACGCAGATTTGTCCATTAACACAGTCCCGTCAACGGAGCCAGATCTCCTTAGTCCTGTAAACCTCAA
ATTTTTCGTGAACAACATTATCGACCTTAGATCCACCACGCACAACTTCATTGACCACAAATCTACCTCCCACATTTGTCATGTAACCCTTTGCTGCCCAAGTTTCTGTC
AACGCCTTCCAAGTTTGTTCGATCCCGTTTCACCCAATCCACACCATCATTGTCTAGTGCGTTTTCCGTTTAAGGGTTCCAGATCTACTACGAATACGCTTCAGATTTGT
CGTTGTCCACCTCTGTCCTATCAAGCATCCATCATTAGTCCCATCTCTCGACCTACTTTCGCGCACTTCTCCCAACATGTCGCTCGTGTAGATTTGACCGCCACCGTTCT
GCTCGTGAATCCACCACCATGTAGATGCTCTACTTCATCCAGACCTTTTGTTGACGATCAGATTGTACCATCTACTGCCACTACAGACCAGATTCTGCTGTTGATCTCTA
CTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCCCCACGTCCTAACTTTGGCTAAAGACTTCCAAGGTGGCCATCAAGTGCTACGGAGCTGCTTCTACAATCTTTCTCCACCACCCAATGAGTTGATCTTGCTTAG
AATAGCACAAAATTGCTTTGAGCTGGCAAGAAATCAAGCTGGTTGTTGTATACTCCAAGAGTGCATTGAATATTCCAATGATAAATTAAGACAACTTCGAGAAGTCCTCA
TATCCCCGTTGATACAAGATGTAGATAATCTTTCAATACATCCTTACGGGAATTATGTAATTCAATATATGATTCAATTGGATGGAGCAAACATAGGATGGAGGATAATC
AATGAACTTAAAAACAAATTTGTCGCACTTTCTATGGACAAGTTTGGAAGCAATGTGGTGGAAAAATGTCTATCTTGTTGTGAAGGTGGCTTTGACTATATTATCTATGA
AATTTTAGAGAATAACAATGAAAATCAACTCCTTCAAATTTGTACAAATCAATATGGCAATTATGTTGTCCAGACAGCCATGTCGGTGGCTAAGGGAAATGCTCATAGGT
TACTTGAAAGAACCATTAAGAGCCATTGCAAATCTAGAGAAGATTTGAAGAAGGTGAAGCTAGTTGTAAAAAATGAATTTGATATGAAGACTCTAGGTGTCGCCGCTCTA
TTTGATAGGCCTTTGTCGATCTATTGTCAACTGTGGCAAATCCACGCAGATTTGTCCATTAACACAGTCCCGTCAACGGAGCCAGATCTCCTTAGTCCTGTAAACCTCAA
ATTTTTCGTGAACAACATTATCGACCTTAGATCCACCACGCACAACTTCATTGACCACAAATCTACCTCCCACATTTGTCATGTAACCCTTTGCTGCCCAAGTTTCTGTC
AACGCCTTCCAAGTTTGTTCGATCCCGTTTCACCCAATCCACACCATCATTGTCTAGTGCGTTTTCCGTTTAAGGGTTCCAGATCTACTACGAATACGCTTCAGATTTGT
CGTTGTCCACCTCTGTCCTATCAAGCATCCATCATTAGTCCCATCTCTCGACCTACTTTCGCGCACTTCTCCCAACATGTCGCTCGTGTAGATTTGACCGCCACCGTTCT
GCTCGTGAATCCACCACCATGTAGATGCTCTACTTCATCCAGACCTTTTGTTGACGATCAGATTGTACCATCTACTGCCACTACAGACCAGATTCTGCTGTTGATCTCTA
CTTGA
Protein sequenceShow/hide protein sequence
MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRII
NELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKSHCKSREDLKKVKLVVKNEFDMKTLGVAAL
FDRPLSIYCQLWQIHADLSINTVPSTEPDLLSPVNLKFFVNNIIDLRSTTHNFIDHKSTSHICHVTLCCPSFCQRLPSLFDPVSPNPHHHCLVRFPFKGSRSTTNTLQIC
RCPPLSYQASIISPISRPTFAHFSQHVARVDLTATVLLVNPPPCRCSTSSRPFVDDQIVPSTATTDQILLLIST