CuGenDBv2

Gene ID	Clc02G07207
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	ATP synthase subunit beta, chloroplastic
Genome location	ClcChr02:7308040..7308453
RNA-Seq Expression	Clc02G07207
Synteny	Clc02G07207
Gene Ontology terms	GO:0006754 - ATP biosynthetic process (biological process) GO:1902600 - proton transmembrane transport (biological process) GO:0009507 - chloroplast (cellular component) GO:0009579 - thylakoid (cellular component) GO:0031090 - organelle membrane (cellular component) GO:0000166 - nucleotide binding (molecular function) GO:0015078 - proton transmembrane transporter activity (molecular function)
InterPro domains	IPR004100 - ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain IPR036121 - ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AAX63018.1 ATP synthase beta subunit, partial [Ruptiliocarpon caracolito]

2.9e-22

72.73

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Query:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT
        MPNIYNALVVK +D A  +INVTCEVQQL G NQVR VAMSA D GLMR M V+DM T LSV V  A LGRI NVL EP+DNL PVDT
Subjt:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT

AAY19321.1 ATP synthase beta subunit, partial [Lepidobotrys staudtii]

2.9e-22

72.73

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Query:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT
        MPNIYNALVVK +D A  +INVTCEVQQL G NQVR VAMSA D GLMR M V+DM T LSV V  A LGRI NVL EP+DNL PVDT
Subjt:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT

AAY19335.1 ATP synthase beta subunit, partial [Ruptiliocarpon caracolito]

2.9e-22

72.73

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Query:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT
        MPNIYNALVVK +D A  +INVTCEVQQL G NQVR VAMSA D GLMR M V+DM T LSV V  A LGRI NVL EP+DNL PVDT
Subjt:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT

YP_009002262.1 ATP synthase CF1 beta subunit [Pinguicula ehlersiae]

6.4e-22

71.59

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Query:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT
        MPNIYNAL+VK +D A   INVTCEVQQL G N+VR VAMSA D GLMRRM V+DM   LSV V  A LGRI NVL EPIDNL PVDT
Subjt:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT

YP_010121652.1 ATP synthase CF1 beta subunit [Micranthes melanocentra]

6.4e-22

70.45

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Query:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT
        MPNIYNALVVK +D  SP+INVTCEVQQL G N+VR VAMSA D GLMR M+V+D    LSV V  A LGRI NVL EP+DNL PVDT
Subjt:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT

TrEMBL top hits

e value

%identity

Alignment

A0A343UPW1 ATP synthase subunit beta, chloroplastic

4.0e-22

70.45

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Query:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT
        MPNIYNALVVK +D A P+INVTCEVQQL G N+VR VAM+A D GLMR M V+D  T LSV V  A LGRI NVL EP+DNL PVDT
Subjt:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT

Q29VA6 ATP synthase subunit beta (Fragment)

1.4e-22

72.73

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Query:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT
        MPNIYNALVVK +D A  +INVTCEVQQL G NQVR VAMSA D GLMR M V+DM T LSV V  A LGRI NVL EP+DNL PVDT
Subjt:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT

Q29VC0 ATP synthase subunit beta (Fragment)

1.4e-22

72.73

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Query:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT
        MPNIYNALVVK +D A  +INVTCEVQQL G NQVR VAMSA D GLMR M V+DM T LSV V  A LGRI NVL EP+DNL PVDT
Subjt:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT

Q4KU58 ATP synthase subunit beta (Fragment)

1.4e-22

72.73

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Query:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT
        MPNIYNALVVK +D A  +INVTCEVQQL G NQVR VAMSA D GLMR M V+DM T LSV V  A LGRI NVL EP+DNL PVDT
Subjt:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT

W1ILW8 ATP synthase subunit beta, chloroplastic

3.1e-22

71.59

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Query:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT
        MPNIYNAL+VK +D A   INVTCEVQQL G N+VR VAMSA D GLMRRM V+DM   LSV V  A LGRI NVL EPIDNL PVDT
Subjt:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT

SwissProt top hits

e value

%identity

Alignment

A0ZZ42 ATP synthase subunit beta, chloroplastic

4.2e-24

70.45

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Query:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT
        MPNIYNALVVK QD A  +INVTCEVQQL G N+VR VAMSA D GL R M V+D  T LSV V  A LGRI NVL EP+DNL PVDT
Subjt:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT

A4GG90 ATP synthase subunit beta, chloroplastic

9.3e-24

70.45

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Query:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT
        MPNIYNALVVK +D    +INVTCEVQQL G N+VR VAMSA D GLMR M V+D  T LSV V  A LGRI NVL EPIDNL PVDT
Subjt:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT

Q6ENV6 ATP synthase subunit beta, chloroplastic

7.1e-24

69.32

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Query:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT
        +PNIYNAL+VK +D A  +INVTCEVQQL G N+VR VAMSA D GLMR M V+D  T LSV V  A LGRI NVL EPIDNL PVDT
Subjt:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT

Q6L392 ATP synthase subunit beta, chloroplastic

7.1e-24

69.32

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Query:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT
        +PNIYNAL+VK +D A  +INVTCEVQQL G N+VR VAMSA D GLMR M V+D  T LSV V  A LGRI NVL EPIDNL PVDT
Subjt:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT

Q6QBP2 ATP synthase subunit beta, chloroplastic

1.6e-23

69.32

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Query:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT
        MPNIYNALVVK +D A  +INVTCEVQQL G N+VR VAMSA D GLMR M V+D    LSV V  A LGRI NVL EP+DNL PVDT
Subjt:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT

Arabidopsis top hits

e value

%identity

Alignment

AT5G08670.1 ATP synthase alpha/beta family protein

4.0e-06

37.5

Show/hide

Query:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT
        +P I  +L V+D         +  EV    G+N VR +AM   + GL+R   V++    ++V V RA LGRI NVL EPID    + T
Subjt:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT

AT5G08680.1 ATP synthase alpha/beta family protein

4.0e-06

37.5

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Query:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT
        +P I  +L V+D         +  EV    G+N VR +AM   + GL+R   V++    ++V V RA LGRI NVL EPID    + T
Subjt:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT

AT5G08690.1 ATP synthase alpha/beta family protein

4.0e-06

37.5

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Query:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT
        +P I  +L V+D         +  EV    G+N VR +AM   + GL+R   V++    ++V V RA LGRI NVL EPID    + T
Subjt:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT

ATCG00480.1 ATP synthase subunit beta

7.3e-24

68.18

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Query:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT
        MPNIYNALVVK +D    +INVTCEVQQL G N+VR VAMSA + GL R M+VVDM   LSV V  A LGRI NVL EP+DNL PVDT
Subjt:  MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDT

Sequences

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CDS sequence

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ATGCCTAATATTTACAATGCTTTGGTAGTTAAAGATCAAGATCCTGCTAGTCCAAAAATTAATGTGACCTGTGAAGTACAACAATTATTCGGAAAAAATCAAGTTAGACT
TGTAGCTATGAGTGCTATAGATCATGGTCTAATGAGAAGAATGAACGTGGTTGACATGAAAACTTTTTTAAGTGTTCTTGTCAGCAGAGCGATTCTCGGCCGAATTCCTA
ACGTACTTGAAGAGCCTATTGATAATTTGAGTCCTGTAGATACTTGCAGAATTGAAGCAGGAGATGTTAAAGTAAAAATTCAAAGTAAGTTTAGAGCTATATATATATTT
TTTAATTAA

mRNA sequence

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Protein sequence

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MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDTCRIEAGDVKVKIQSKFRAIYIF
FN

Clc02G07207 (gene) of Watermelon (cordophanus) v2 genome