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Clc02G07380 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G07380
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptioncysteine-rich and transmembrane domain-containing protein WIH2-like
Genome locationClcChr02:7614924..7617806
RNA-Seq ExpressionClc02G07380
SyntenyClc02G07380
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031373.1 cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo var. makuwa]2.4e-1497.73Show/hide
Query:  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAG
        SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPP GYPPQGGYPPAG
Subjt:  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAG

XP_008455047.1 PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo]2.4e-1497.73Show/hide
Query:  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAG
        SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPP GYPPQGGYPPAG
Subjt:  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAG

XP_022972438.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita maxima]3.8e-1597.78Show/hide
Query:  MSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAG
        MSYY QPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAG
Subjt:  MSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAG

XP_023553865.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo]3.8e-1597.78Show/hide
Query:  MSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAG
        MSYY QPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAG
Subjt:  MSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAG

XP_038888465.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Benincasa hispida]6.4e-1595.56Show/hide
Query:  MSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAG
        MSYYAQPPPPVGVPPPQG+PPQGYPPKD YPPPGYPPQGGYPPAG
Subjt:  MSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAG

TrEMBL top hitse value%identityAlignment
A0A0A0K2W8 Uncharacterized protein1.2e-1497.73Show/hide
Query:  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAG
        SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPP GYPPQGGYPPAG
Subjt:  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAG

A0A1S3BZZ2 cysteine-rich and transmembrane domain-containing protein A-like1.2e-1497.73Show/hide
Query:  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAG
        SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPP GYPPQGGYPPAG
Subjt:  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAG

A0A5A7SME1 Cysteine-rich and transmembrane domain-containing protein A-like1.2e-1497.73Show/hide
Query:  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAG
        SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPP GYPPQGGYPPAG
Subjt:  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAG

A0A6J1GJV9 cysteine-rich and transmembrane domain-containing protein WIH2-like1.5e-1495.56Show/hide
Query:  MSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAG
        MSYY QPPPPVGVPPPQGYPPQGYPPKDAYPP GYPPQGGYPPAG
Subjt:  MSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAG

A0A6J1I9Y5 cysteine-rich and transmembrane domain-containing protein WIH2-like1.8e-1597.78Show/hide
Query:  MSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAG
        MSYY QPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAG
Subjt:  MSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAG

SwissProt top hitse value%identityAlignment
O16005 Rhodopsin1.8e-0461.36Show/hide
Query:  PPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGISTSA
        PPPP G PP QGYPPQGYPP    PP G PPQ   PP G+   A
Subjt:  PPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGISTSA

P09241 Rhodopsin7.4e-0668.09Show/hide
Query:  YAQPPPPVGVPPPQGYPPQG-YPPKDAYPPPGYPPQG----GYPPAG
        Y  PPPP G  PPQGYPPQG YPP   YPP GYPPQG    GYPP G
Subjt:  YAQPPPPVGVPPPQGYPPQG-YPPKDAYPPPGYPPQG----GYPPAG

P24639 Annexin A71.9e-0663.04Show/hide
Query:  PPPVGVPPPQGYPP-QGYPPKDAYPPPGYPPQGGYPPAGISTSAGV
        PP  G PP QGYPP QGYPP+  YPP GYPPQ GYPP G+     V
Subjt:  PPPVGVPPPQGYPP-QGYPPKDAYPPPGYPPQGGYPPAGISTSAGV

P31356 Rhodopsin5.3e-0475Show/hide
Query:  PPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPP
        PP    PPPQGYPPQGYPP+  YPP GYPPQ GYPP
Subjt:  PPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPP

Q8S8M0 Cysteine-rich and transmembrane domain-containing protein WIH22.5e-0975.51Show/hide
Query:  MSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQG----GYPPAG
        MS Y Q  PPVGVPPPQGYPP+GY PKDAYPP GYPPQG    GYPP G
Subjt:  MSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQG----GYPPAG

Arabidopsis top hitse value%identityAlignment
AT1G31750.1 proline-rich family protein1.3e-0562Show/hide
Query:  AQPPPPVGV-PPPQGYPPQGY-PPKDAYPPPGY-PPQGGYPPAGISTSAG
        A PPPP G  PPP GYPPQGY PP   YPP  Y PP G YPPAG    +G
Subjt:  AQPPPPVGV-PPPQGYPPQGY-PPKDAYPPPGY-PPQGGYPPAGISTSAG

AT2G41420.1 proline-rich family protein1.7e-1075.51Show/hide
Query:  MSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQG----GYPPAG
        MS Y Q  PPVGVPPPQGYPP+GY PKDAYPP GYPPQG    GYPP G
Subjt:  MSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQG----GYPPAG

AT3G49845.1 unknown protein1.2e-0671.05Show/hide
Query:  PPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAG
        PPP G PP +GYPP GYPP   YPPP Y PQ GYPPAG
Subjt:  PPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAG

AT5G17650.1 glycine/proline-rich protein2.9e-0563.64Show/hide
Query:  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAG
        S Y  PPP    PPP GYPP  YPP   YPP GYPP  GYPPAG
Subjt:  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAG

AT5G67600.1 unknown protein5.4e-0463.04Show/hide
Query:  YAQPPPPVGVPPPQGYPPQ-GYPPKDAYPPPGYPPQG---GYPPAG
        Y Q   PVG PPPQGYPP+ GYPP   YPP GYPP G   GYP  G
Subjt:  YAQPPPPVGVPPPQGYPPQ-GYPPKDAYPPPGYPPQG---GYPPAG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTACTACGCCCAGCCACCGCCCCCCGTCGGCGTTCCTCCGCCGCAAGGTTATCCACCGCAAGGATATCCTCCGAAGGACGCTTATCCGCCGCCAGGATATCCACC
GCAGGGCGGTTATCCACCTGCTGGGATATCCACCTCCGCCGGCGTATGGTGCTCCTTGGATTCGTCGAAGGCTGTTTGGCTGCTCTTTGTTGCTGCTTTATGTTGGATGT
TTGCTTTTGATGATGGCGTACAGATTTTGAATTTGAATTTGAATTTCATCTCCATATATTTAATTTGTGAGTGTGTAATATTCATGTTTCTATTCTCATTATACCTACTC
TATCTCTCTTCATACTTCTTGAACCCTTGCTTCCAATGGATATAG
mRNA sequenceShow/hide mRNA sequence
GAAAAAGTCCGCGTTATTGTTCTTTAATGTTTATTCGTACTCTAAAAGTTATAGAGCTCTCGTCTCTGTGTTTAGCAACTAAGAAAAGATCAATCCGATCGTTTCAAGAA
ATCTCATAGAAAGAGAGAGAGGGAAAATATGAGTTACTACGCCCAGCCACCGCCCCCCGTCGGCGTTCCTCCGCCGCAAGGTTATCCACCGCAAGGATATCCTCCGAAGG
ACGCTTATCCGCCGCCAGGATATCCACCGCAGGGCGGTTATCCACCTGCTGGGATATCCACCTCCGCCGGCGTATGGTGCTCCTTGGATTCGTCGAAGGCTGTTTGGCTG
CTCTTTGTTGCTGCTTTATGTTGGATGTTTGCTTTTGATGATGGCGTACAGATTTTGAATTTGAATTTGAATTTCATCTCCATATATTTAATTTGTGAGTGTGTAATATT
CATGTTTCTATTCTCATTATACCTACTCTATCTCTCTTCATACTTCTTGAACCCTTGCTTCCAATGGATATAGATTTTTAACTTTTATTTTTGTCTATTGGATTTTGGAT
CAC
Protein sequenceShow/hide protein sequence
MSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGISTSAGVWCSLDSSKAVWLLFVAALCWMFAFDDGVQILNLNLNFISIYLICECVIFMFLFSLYLL
YLSSYFLNPCFQWI