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Clc02G07610 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G07610
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionbasic form of pathogenesis-related protein 1-like
Genome locationClcChr02:8025673..8025929
RNA-Seq ExpressionClc02G07610
SyntenyClc02G07610
Gene Ontology termsGO:0005576 - extracellular region (cellular component)
InterPro domainsIPR035940 - CAP superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588723.1 hypothetical protein SDJN03_17288, partial [Cucurbita argyrosperma subsp. sororia]1.1e-0547.76Show/hide
Query:  NYTAAHNAIR-----------------AKNYANTKITTCKMEHSRGPYGENLTKGYKMMTAETTMSL
        +Y  AHNAIR                 A+NYA TKI +C+M HS GPYGENL +GY+ MTAE  + L
Subjt:  NYTAAHNAIR-----------------AKNYANTKITTCKMEHSRGPYGENLTKGYKMMTAETTMSL

XP_004137080.2 pathogenesis-related protein 1A [Cucumis sativus]1.1e-0851.32Show/hide
Query:  PHLRRKLP-NYTAAHNAIR-----------------AKNYANTKITTCKMEHSRGPYGENLTKGYKMMTAETTMSL
        P L +  P NY  AHNA+R                 A+NYANTKI TC+MEHS GPYGENL +G ++MTAET +SL
Subjt:  PHLRRKLP-NYTAAHNAIR-----------------AKNYANTKITTCKMEHSRGPYGENLTKGYKMMTAETTMSL

XP_008455069.1 PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo]8.4e-0952.63Show/hide
Query:  PHLRRKLP-NYTAAHNAIR-----------------AKNYANTKITTCKMEHSRGPYGENLTKGYKMMTAETTMSL
        P L +  P NY  AHNAIR                 A+NYANTKI TC+MEHS GPYGENL +GY+ MTAE  +SL
Subjt:  PHLRRKLP-NYTAAHNAIR-----------------AKNYANTKITTCKMEHSRGPYGENLTKGYKMMTAETTMSL

XP_022927709.1 pathogenesis-related protein 1A-like [Cucurbita moschata]1.1e-0547.76Show/hide
Query:  NYTAAHNAIR-----------------AKNYANTKITTCKMEHSRGPYGENLTKGYKMMTAETTMSL
        +Y  AHNAIR                 A+NYA TKI +C+M HS GPYGENL +GY+ MTAE  + L
Subjt:  NYTAAHNAIR-----------------AKNYANTKITTCKMEHSRGPYGENLTKGYKMMTAETTMSL

XP_038888921.1 basic form of pathogenesis-related protein 1-like [Benincasa hispida]3.4e-1058.21Show/hide
Query:  NYTAAHNAIR-----------------AKNYANTKITTCKMEHSRGPYGENLTKGYKMMTAETTMSL
        NY AAHNAIR                 A+NYANTKI TC+MEHS GPYGENL +GY++MTAET +SL
Subjt:  NYTAAHNAIR-----------------AKNYANTKITTCKMEHSRGPYGENLTKGYKMMTAETTMSL

TrEMBL top hitse value%identityAlignment
A0A0A0K7N5 SCP domain-containing protein5.3e-0951.32Show/hide
Query:  PHLRRKLP-NYTAAHNAIR-----------------AKNYANTKITTCKMEHSRGPYGENLTKGYKMMTAETTMSL
        P L +  P NY  AHNA+R                 A+NYANTKI TC+MEHS GPYGENL +G ++MTAET +SL
Subjt:  PHLRRKLP-NYTAAHNAIR-----------------AKNYANTKITTCKMEHSRGPYGENLTKGYKMMTAETTMSL

A0A1S3C0S3 basic form of pathogenesis-related protein 1-like4.1e-0952.63Show/hide
Query:  PHLRRKLP-NYTAAHNAIR-----------------AKNYANTKITTCKMEHSRGPYGENLTKGYKMMTAETTMSL
        P L +  P NY  AHNAIR                 A+NYANTKI TC+MEHS GPYGENL +GY+ MTAE  +SL
Subjt:  PHLRRKLP-NYTAAHNAIR-----------------AKNYANTKITTCKMEHSRGPYGENLTKGYKMMTAETTMSL

A0A5A7SPC2 Basic form of pathogenesis-related protein 1-like4.1e-0952.63Show/hide
Query:  PHLRRKLP-NYTAAHNAIR-----------------AKNYANTKITTCKMEHSRGPYGENLTKGYKMMTAETTMSL
        P L +  P NY  AHNAIR                 A+NYANTKI TC+MEHS GPYGENL +GY+ MTAE  +SL
Subjt:  PHLRRKLP-NYTAAHNAIR-----------------AKNYANTKITTCKMEHSRGPYGENLTKGYKMMTAETTMSL

A0A6J1EIR8 pathogenesis-related protein 1A-like5.5e-0647.76Show/hide
Query:  NYTAAHNAIR-----------------AKNYANTKITTCKMEHSRGPYGENLTKGYKMMTAETTMSL
        +Y  AHNAIR                 A+NYA TKI +C+M HS GPYGENL +GY+ MTAE  + L
Subjt:  NYTAAHNAIR-----------------AKNYANTKITTCKMEHSRGPYGENLTKGYKMMTAETTMSL

A0A6J1JNW9 basic form of pathogenesis-related protein 1-like7.2e-0647.76Show/hide
Query:  NYTAAHNAIR-----------------AKNYANTKITTCKMEHSRGPYGENLTKGYKMMTAETTMSL
        ++  AHNAIR                 A+ YA +KITTC+MEHS GPYGENL  GY+ +TAET + L
Subjt:  NYTAAHNAIR-----------------AKNYANTKITTCKMEHSRGPYGENLTKGYKMMTAETTMSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G14580.1 basic pathogenesis-related protein 16.6e-0460Show/hide
Query:  AIRAKNYANTKITTCKMEHSRGPYGENLTK
        A  A+NYAN     C++ HSRGPYGENL K
Subjt:  AIRAKNYANTKITTCKMEHSRGPYGENLTK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAACCAGAACCCTATCCTACATTGCCCCCATCTTCGCCGAAAGCTACCCAACTACACTGCTGCCCACAATGCAATCCGCGCGAAAAACTATGCCAACACGAAGAT
CACTACTTGTAAAATGGAGCACTCTAGAGGACCTTATGGCGAGAACCTAACGAAGGGGTACAAAATGATGACAGCAGAGACAACAATGAGTCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAACCAGAACCCTATCCTACATTGCCCCCATCTTCGCCGAAAGCTACCCAACTACACTGCTGCCCACAATGCAATCCGCGCGAAAAACTATGCCAACACGAAGAT
CACTACTTGTAAAATGGAGCACTCTAGAGGACCTTATGGCGAGAACCTAACGAAGGGGTACAAAATGATGACAGCAGAGACAACAATGAGTCTCTAA
Protein sequenceShow/hide protein sequence
MANQNPILHCPHLRRKLPNYTAAHNAIRAKNYANTKITTCKMEHSRGPYGENLTKGYKMMTAETTMSL