| GenBank top hits | e value | %identity | Alignment |
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| MCH81412.1 gag-pol polyprotein [Trifolium medium] | 5.2e-29 | 50 | Show/hide |
Query: TSLKSSTREDW--KSHFSRLNFIGKGKLNFQCLPSLDDVMLIEGLTANLISISQLCDQGMNVSFTKEQCVVSNDAEAIVMTGTRSSKNCYLWNP--ENGS
TSL++S+REDW S SR G GKL LP+LD+V+L++GLTANLISISQLCDQG+ V+FTK +C+V+++ ++M G RS NCYLW P EN
Subjt: TSLKSSTREDW--KSHFSRLNFIGKGKLNFQCLPSLDDVMLIEGLTANLISISQLCDQGMNVSFTKEQCVVSNDAEAIVMTGTRSSKNCYLWNP--ENGS
Query: LVCRLFRQDEASLSHKRLGHISMKIIQKALAKNVISGLPSLS
C + ++DE L H++LGH+ ++ ++KA+A+ I GLP L+
Subjt: LVCRLFRQDEASLSHKRLGHISMKIIQKALAKNVISGLPSLS
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| PNX66734.1 serine/threonine protein kinase SRPK1, partial [Trifolium pratense] | 5.4e-26 | 48.59 | Show/hide |
Query: TSLKSSTREDWKSHF---SRLNFIGKGKLNFQCLPSLDDVMLIEGLTANLISISQLCDQGMNVSFTKEQCVVSNDAEAIVMTGTRSSKNCYLWNP--ENG
TSL++S+RE F ++ G GKL LP LD+V+L+EGL ANLIS SQLCDQGM V+FTK +C+V+ND ++M G RS NCYLW P E+
Subjt: TSLKSSTREDWKSHF---SRLNFIGKGKLNFQCLPSLDDVMLIEGLTANLISISQLCDQGMNVSFTKEQCVVSNDAEAIVMTGTRSSKNCYLWNP--ENG
Query: SLVCRLFRQDEASLSHKRLGHISMKIIQKALAKNVISGLPSL
C + ++DE L ++LGH+ +K ++KA+AK I GLP L
Subjt: SLVCRLFRQDEASLSHKRLGHISMKIIQKALAKNVISGLPSL
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| PNX93845.1 gag-protease polyprotein, partial [Trifolium pratense] | 3.2e-26 | 41.07 | Show/hide |
Query: TSLKSSTREDW--------------------KSHFSRL---------NFIGKGKLNFQCLPSLDDVMLIEGLTANLISISQLCDQGMNVSFTKEQCVVSN
TSL++S+REDW KS+ + +G GKLN LP L++V+L++GLTANLISI+QLCDQGMNV+FTK +C+V+N
Subjt: TSLKSSTREDW--------------------KSHFSRL---------NFIGKGKLNFQCLPSLDDVMLIEGLTANLISISQLCDQGMNVSFTKEQCVVSN
Query: DAEAIVMTGTRSSKNCYLWNP--ENGSLVCRLFRQDEASLSHKRLGHISMKIIQKALAKNVISGLPSL
D ++M G R+ NCYLW P E C + ++DE H++LGH++ + ++KA+++ I GLP+L
Subjt: DAEAIVMTGTRSSKNCYLWNP--ENGSLVCRLFRQDEASLSHKRLGHISMKIIQKALAKNVISGLPSL
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| PNX99503.1 gag-protease polyprotein, partial [Trifolium pratense] | 8.3e-27 | 41.67 | Show/hide |
Query: TSLKSSTREDW--------------------KSHF---------SRLNFIGKGKLNFQCLPSLDDVMLIEGLTANLISISQLCDQGMNVSFTKEQCVVSN
TSL++S+REDW KS+ ++ +G G+L LP L++V+L+ GLTANLISISQLCDQGM V+FTK +C+V++
Subjt: TSLKSSTREDW--------------------KSHF---------SRLNFIGKGKLNFQCLPSLDDVMLIEGLTANLISISQLCDQGMNVSFTKEQCVVSN
Query: DAEAIVMTGTRSSKNCYLWNPENGSLV--CRLFRQDEASLSHKRLGHISMKIIQKALAKNVISGLPSL
+ I+M G RS NCYLW P+ G+ V C + ++DE L H+RLGH++++ ++KA+++ I GLP+L
Subjt: DAEAIVMTGTRSSKNCYLWNPENGSLV--CRLFRQDEASLSHKRLGHISMKIIQKALAKNVISGLPSL
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| PNY10358.1 retrotransposon-related protein, partial [Trifolium pratense] | 3.7e-27 | 43.45 | Show/hide |
Query: TSLKSSTREDW--------------------KSHFSRL---------NFIGKGKLNFQCLPSLDDVMLIEGLTANLISISQLCDQGMNVSFTKEQCVVSN
TSLK+S+R+DW KS+ S G G+L LP L++V+L++GLTANLISISQLCDQGM V+FTKE+C+VSN
Subjt: TSLKSSTREDW--------------------KSHFSRL---------NFIGKGKLNFQCLPSLDDVMLIEGLTANLISISQLCDQGMNVSFTKEQCVVSN
Query: DAEAIVMTGTRSSKNCYLWNP--ENGSLVCRLFRQDEASLSHKRLGHISMKIIQKALAKNVISGLPSL
D ++M G RS NCYLW P E C ++DE + H+RLGH++++ ++KA++K I GLP+L
Subjt: DAEAIVMTGTRSSKNCYLWNP--ENGSLVCRLFRQDEASLSHKRLGHISMKIIQKALAKNVISGLPSL
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A2K3KKC5 Serine/threonine protein kinase SRPK1 (Fragment) | 2.6e-26 | 48.59 | Show/hide |
Query: TSLKSSTREDWKSHF---SRLNFIGKGKLNFQCLPSLDDVMLIEGLTANLISISQLCDQGMNVSFTKEQCVVSNDAEAIVMTGTRSSKNCYLWNP--ENG
TSL++S+RE F ++ G GKL LP LD+V+L+EGL ANLIS SQLCDQGM V+FTK +C+V+ND ++M G RS NCYLW P E+
Subjt: TSLKSSTREDWKSHF---SRLNFIGKGKLNFQCLPSLDDVMLIEGLTANLISISQLCDQGMNVSFTKEQCVVSNDAEAIVMTGTRSSKNCYLWNP--ENG
Query: SLVCRLFRQDEASLSHKRLGHISMKIIQKALAKNVISGLPSL
C + ++DE L ++LGH+ +K ++KA+AK I GLP L
Subjt: SLVCRLFRQDEASLSHKRLGHISMKIIQKALAKNVISGLPSL
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| A0A2K3MSR1 Gag-protease polyprotein (Fragment) | 1.5e-26 | 41.07 | Show/hide |
Query: TSLKSSTREDW--------------------KSHFSRL---------NFIGKGKLNFQCLPSLDDVMLIEGLTANLISISQLCDQGMNVSFTKEQCVVSN
TSL++S+REDW KS+ + +G GKLN LP L++V+L++GLTANLISI+QLCDQGMNV+FTK +C+V+N
Subjt: TSLKSSTREDW--------------------KSHFSRL---------NFIGKGKLNFQCLPSLDDVMLIEGLTANLISISQLCDQGMNVSFTKEQCVVSN
Query: DAEAIVMTGTRSSKNCYLWNP--ENGSLVCRLFRQDEASLSHKRLGHISMKIIQKALAKNVISGLPSL
D ++M G R+ NCYLW P E C + ++DE H++LGH++ + ++KA+++ I GLP+L
Subjt: DAEAIVMTGTRSSKNCYLWNP--ENGSLVCRLFRQDEASLSHKRLGHISMKIIQKALAKNVISGLPSL
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| A0A2K3N8X7 Gag-protease polyprotein (Fragment) | 4.0e-27 | 41.67 | Show/hide |
Query: TSLKSSTREDW--------------------KSHF---------SRLNFIGKGKLNFQCLPSLDDVMLIEGLTANLISISQLCDQGMNVSFTKEQCVVSN
TSL++S+REDW KS+ ++ +G G+L LP L++V+L+ GLTANLISISQLCDQGM V+FTK +C+V++
Subjt: TSLKSSTREDW--------------------KSHF---------SRLNFIGKGKLNFQCLPSLDDVMLIEGLTANLISISQLCDQGMNVSFTKEQCVVSN
Query: DAEAIVMTGTRSSKNCYLWNPENGSLV--CRLFRQDEASLSHKRLGHISMKIIQKALAKNVISGLPSL
+ I+M G RS NCYLW P+ G+ V C + ++DE L H+RLGH++++ ++KA+++ I GLP+L
Subjt: DAEAIVMTGTRSSKNCYLWNPENGSLV--CRLFRQDEASLSHKRLGHISMKIIQKALAKNVISGLPSL
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| A0A2K3P4Z0 Retrotransposon-related protein (Fragment) | 1.8e-27 | 43.45 | Show/hide |
Query: TSLKSSTREDW--------------------KSHFSRL---------NFIGKGKLNFQCLPSLDDVMLIEGLTANLISISQLCDQGMNVSFTKEQCVVSN
TSLK+S+R+DW KS+ S G G+L LP L++V+L++GLTANLISISQLCDQGM V+FTKE+C+VSN
Subjt: TSLKSSTREDW--------------------KSHFSRL---------NFIGKGKLNFQCLPSLDDVMLIEGLTANLISISQLCDQGMNVSFTKEQCVVSN
Query: DAEAIVMTGTRSSKNCYLWNP--ENGSLVCRLFRQDEASLSHKRLGHISMKIIQKALAKNVISGLPSL
D ++M G RS NCYLW P E C ++DE + H+RLGH++++ ++KA++K I GLP+L
Subjt: DAEAIVMTGTRSSKNCYLWNP--ENGSLVCRLFRQDEASLSHKRLGHISMKIIQKALAKNVISGLPSL
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| A0A392M256 Gag-pol polyprotein (Fragment) | 2.5e-29 | 50 | Show/hide |
Query: TSLKSSTREDW--KSHFSRLNFIGKGKLNFQCLPSLDDVMLIEGLTANLISISQLCDQGMNVSFTKEQCVVSNDAEAIVMTGTRSSKNCYLWNP--ENGS
TSL++S+REDW S SR G GKL LP+LD+V+L++GLTANLISISQLCDQG+ V+FTK +C+V+++ ++M G RS NCYLW P EN
Subjt: TSLKSSTREDW--KSHFSRLNFIGKGKLNFQCLPSLDDVMLIEGLTANLISISQLCDQGMNVSFTKEQCVVSNDAEAIVMTGTRSSKNCYLWNP--ENGS
Query: LVCRLFRQDEASLSHKRLGHISMKIIQKALAKNVISGLPSLS
C + ++DE L H++LGH+ ++ ++KA+A+ I GLP L+
Subjt: LVCRLFRQDEASLSHKRLGHISMKIIQKALAKNVISGLPSLS
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