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Clc02G07840 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G07840
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr02:8514205..8514747
RNA-Seq ExpressionClc02G07840
SyntenyClc02G07840
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043050.1 uncharacterized protein E6C27_scaffold75G001340 [Cucumis melo var. makuwa]1.5e-2072.15Show/hide
Query:  MFKIRSFCLAFIMILMTIPNFANFADCRLLRSEAESNGVKEHDVHEKPKTLTPHPKGSSSRVDRVFTLASGPSRKGAGH
        MFK+RS  +A IMILM IPNFA FA+ R+LRSEAE +GVKEHDV EKPK L P PK SSS  +RV TLASGPSRKG GH
Subjt:  MFKIRSFCLAFIMILMTIPNFANFADCRLLRSEAESNGVKEHDVHEKPKTLTPHPKGSSSRVDRVFTLASGPSRKGAGH
KAE8652345.1 hypothetical protein Csa_022541, partial [Cucumis sativus]6.5e-2175Show/hide
Query:  MFKIRSFCLAFIMILMTIPNFANFADCRLLRSEAESNGVKEHDV-HEKPKTLTPHPKGSSSRVDRVFTLASGPSRKGAGH
        MFK+RSF +A IMILM IPNFA FA+ R+LRSEAE   VKEHDV  EKPK LTP PK SSS  DRVFTLASGPSRKG GH
Subjt:  MFKIRSFCLAFIMILMTIPNFANFADCRLLRSEAESNGVKEHDV-HEKPKTLTPHPKGSSSRVDRVFTLASGPSRKGAGH
TYK01636.1 uncharacterized protein E5676_scaffold38G00040 [Cucumis melo var. makuwa]9.4e-2070.89Show/hide
Query:  MFKIRSFCLAFIMILMTIPNFANFADCRLLRSEAESNGVKEHDVHEKPKTLTPHPKGSSSRVDRVFTLASGPSRKGAGH
        MFK+ S  +A IMILM IPNFA FA+ R+LRSEAE +GVKEHDV EKPK L P PK SSS  +RV TLASGPSRKG GH
Subjt:  MFKIRSFCLAFIMILMTIPNFANFADCRLLRSEAESNGVKEHDVHEKPKTLTPHPKGSSSRVDRVFTLASGPSRKGAGH
TrEMBL top hitse value%identityAlignment
A0A5A7TI98 Uncharacterized protein7.0e-2172.15Show/hide
Query:  MFKIRSFCLAFIMILMTIPNFANFADCRLLRSEAESNGVKEHDVHEKPKTLTPHPKGSSSRVDRVFTLASGPSRKGAGH
        MFK+RS  +A IMILM IPNFA FA+ R+LRSEAE +GVKEHDV EKPK L P PK SSS  +RV TLASGPSRKG GH
Subjt:  MFKIRSFCLAFIMILMTIPNFANFADCRLLRSEAESNGVKEHDVHEKPKTLTPHPKGSSSRVDRVFTLASGPSRKGAGH
A0A5D3BTU1 Uncharacterized protein4.6e-2070.89Show/hide
Query:  MFKIRSFCLAFIMILMTIPNFANFADCRLLRSEAESNGVKEHDVHEKPKTLTPHPKGSSSRVDRVFTLASGPSRKGAGH
        MFK+ S  +A IMILM IPNFA FA+ R+LRSEAE +GVKEHDV EKPK L P PK SSS  +RV TLASGPSRKG GH
Subjt:  MFKIRSFCLAFIMILMTIPNFANFADCRLLRSEAESNGVKEHDVHEKPKTLTPHPKGSSSRVDRVFTLASGPSRKGAGH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAAGATCAGAAGCTTTTGCTTAGCTTTTATTATGATTCTAATGACTATCCCAAACTTTGCCAATTTTGCCGATTGTCGACTGCTCCGATCGGAGGCCGAG
AGCAACGGGGTTAAGGAACATGATGTTCACGAAAAGCCAAAAACCCTAACACCGCACCCGAAAGGTTCCAGCAGTAGAGTCGACCGAGTCTTCACGTTGGCTTCG
GGACCGAGCAGGAAGGGCGCCGGCCATTAG
mRNA sequenceShow/hide mRNA sequence
ATTCAATCCCTAAAATGCTCCTAATTAAAGTGAGTTTTTGAGTCAAACACTTCCCTTCATAAAAGTCATGTCCCACTCCCAGAAAGGCTTCTTCTTTTCAACCGT
CCATTGGCCATATCAAAAAAGAAATTCACCAATACATTTAATATAAAGAAGAAGAAATTCAAAGCAATGTGAGATGCCAAACCAAACCAAAGCAACCCCTTTTTG
GCTCTCCATATTATTGATTCTTTTTGCTGATCTTGTTGCGAAATGTTCAAGATCAGAAGCTTTTGCTTAGCTTTTATTATGATTCTAATGACTATCCCAAACTTT
GCCAATTTTGCCGATTGTCGACTGCTCCGATCGGAGGCCGAGAGCAACGGGGTTAAGGAACATGATGTTCACGAAAAGCCAAAAACCCTAACACCGCACCCGAAA
GGTTCCAGCAGTAGAGTCGACCGAGTCTTCACGTTGGCTTCGGGACCGAGCAGGAAGGGCGCCGGCCATTAGTCACAAATGTTCTTATAATACCATGTTCATTGA
TCACACAATTCGTTGCTT
Protein sequenceShow/hide protein sequence
MFKIRSFCLAFIMILMTIPNFANFADCRLLRSEAESNGVKEHDVHEKPKTLTPHPKGSSSRVDRVFTLASGPSRKGAGH