; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G07870 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G07870
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionTranspos_assoc domain-containing protein
Genome locationClcChr02:8576836..8578550
RNA-Seq ExpressionClc02G07870
SyntenyClc02G07870
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040452.1 uncharacterized protein E6C27_scaffold35G00950 [Cucumis melo var. makuwa]2.9e-0474.29Show/hide
Query:  LADDGLREEPTTQNDDNELLDLLNDLQGPMREMEY
        L DD LRE+PTT+NDDNEL  LLNDLQGPM+E  Y
Subjt:  LADDGLREEPTTQNDDNELLDLLNDLQGPMREMEY
TYK14987.1 uncharacterized protein E5676_scaffold45G00180 [Cucumis melo var. makuwa]4.9e-0463.04Show/hide
Query:  MTPLAPLADDG-----LREEPTTQNDDNELLDLLNDLQGPMREMEY
        MT L  L DDG     LRE+PT +NDD+EL +LLNDLQGPMRE  Y
Subjt:  MTPLAPLADDG-----LREEPTTQNDDNELLDLLNDLQGPMREMEY
TYK28900.1 uncharacterized protein E5676_scaffold2406G00230 [Cucumis melo var. makuwa]2.9e-0474.29Show/hide
Query:  LADDGLREEPTTQNDDNELLDLLNDLQGPMREMEY
        L DD LRE+PTT+NDDNEL  LLNDLQGPM+E  Y
Subjt:  LADDGLREEPTTQNDDNELLDLLNDLQGPMREMEY
TrEMBL top hitse value%identityAlignment
A0A5A7TAI0 Transpos_assoc domain-containing protein1.4e-0474.29Show/hide
Query:  LADDGLREEPTTQNDDNELLDLLNDLQGPMREMEY
        L DD LRE+PTT+NDDNEL  LLNDLQGPM+E  Y
Subjt:  LADDGLREEPTTQNDDNELLDLLNDLQGPMREMEY
A0A5D3CSS7 Uncharacterized protein2.4e-0463.04Show/hide
Query:  MTPLAPLADDG-----LREEPTTQNDDNELLDLLNDLQGPMREMEY
        MT L  L DDG     LRE+PT +NDD+EL +LLNDLQGPMRE  Y
Subjt:  MTPLAPLADDG-----LREEPTTQNDDNELLDLLNDLQGPMREMEY
A0A5D3E061 Transpos_assoc domain-containing protein1.4e-0474.29Show/hide
Query:  LADDGLREEPTTQNDDNELLDLLNDLQGPMREMEY
        L DD LRE+PTT+NDDNEL  LLNDLQGPM+E  Y
Subjt:  LADDGLREEPTTQNDDNELLDLLNDLQGPMREMEY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCTTATGCCGACGCAAAGCTACGTCGGCAAAGATCAATATAGAACAAAAGAATACCTTTTTTCCCCAGATCTATGGCGACGCAAATATGCATCGAAAAAAGTTGA
CCTAAAAAAGCCATCGCCATTGACTTCTCCTCAACAGCCATCGTCGCATAGATGTCTCCTCGCCAACCTATTCTCCGCGCGGCGTCTCCTCCGGCATTCTTTGACCTGTT
CTTTGCACGTCGCTGGCTTCTCCACCGACTTCTCCCCAACAACCATCGTCGTCGGCTTCTCAATGTGTTCTCCTCATGCCACCGACTTCTCCCCAACGGCCATCGTTGCT
GGCTTCTTCGACCTGTTTTCCACACGCTGTCGACTTCTCCCTAACAGCCCTCGTCACTGGCTTCTCCAACTCAGTCTCCATGCATACGTCTCCTCCGACTCATTCTTTGT
GCGACGTCTCCCCAACAGCCATCGTTGTCGGCTTGTTCTAGTCATGACTCCTTTAGCTCCTTTAGCAGATGATGGATTAAGGGAAGAACCTACTACTCAAAATGATGACA
ATGAGTTGTTAGATCTTTTAAATGATTTGCAAGGACCGATGAGAGAAATGGAATATATTTGGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCTTATGCCGACGCAAAGCTACGTCGGCAAAGATCAATATAGAACAAAAGAATACCTTTTTTCCCCAGATCTATGGCGACGCAAATATGCATCGAAAAAAGTTGA
CCTAAAAAAGCCATCGCCATTGACTTCTCCTCAACAGCCATCGTCGCATAGATGTCTCCTCGCCAACCTATTCTCCGCGCGGCGTCTCCTCCGGCATTCTTTGACCTGTT
CTTTGCACGTCGCTGGCTTCTCCACCGACTTCTCCCCAACAACCATCGTCGTCGGCTTCTCAATGTGTTCTCCTCATGCCACCGACTTCTCCCCAACGGCCATCGTTGCT
GGCTTCTTCGACCTGTTTTCCACACGCTGTCGACTTCTCCCTAACAGCCCTCGTCACTGGCTTCTCCAACTCAGTCTCCATGCATACGTCTCCTCCGACTCATTCTTTGT
GCGACGTCTCCCCAACAGCCATCGTTGTCGGCTTGTTCTAGTCATGACTCCTTTAGCTCCTTTAGCAGATGATGGATTAAGGGAAGAACCTACTACTCAAAATGATGACA
ATGAGTTGTTAGATCTTTTAAATGATTTGCAAGGACCGATGAGAGAAATGGAATATATTTGGAGATGA
Protein sequenceShow/hide protein sequence
MGLMPTQSYVGKDQYRTKEYLFSPDLWRRKYASKKVDLKKPSPLTSPQQPSSHRCLLANLFSARRLLRHSLTCSLHVAGFSTDFSPTTIVVGFSMCSPHATDFSPTAIVA
GFFDLFSTRCRLLPNSPRHWLLQLSLHAYVSSDSFFVRRLPNSHRCRLVLVMTPLAPLADDGLREEPTTQNDDNELLDLLNDLQGPMREMEYIWR