; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G08005 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G08005
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description50S ribosomal protein L33, chloroplastic
Genome locationClcChr02:8956912..8957112
RNA-Seq ExpressionClc02G08005
SyntenyClc02G08005
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001705 - Ribosomal protein L33
IPR011332 - Zinc-binding ribosomal protein
IPR018264 - Ribosomal protein L33, conserved site
IPR038584 - Ribosomal protein L33 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ALO22192.1 ribosomal protein L33 [Cucurbita foetidissima]4.4e-2284.85Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK
        MAKGKDARVTVILECTRC       ES+GISRYITQKNRHNTPSRLEL KFCPR YKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK
QJF46404.1 ribosomal protein L33 [Cucumis melo]3.4e-2286.36Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK
        MAKGKDARVTVILECTRC       ESIGISRYITQKNRHNTPSRLEL KFCPR YKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK
YP_004841804.1 ribosomal protein L33 [Cucumis melo subsp. melo]3.4e-2286.36Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK
        MAKGKDARVTVILECTRC       ESIGISRYITQKNRHNTPSRLEL KFCPR YKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK
YP_009430648.1 ribosomal protein L33 [Gynostemma cardiospermum]3.4e-2286.36Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK
        MAKGKDARVTVILECTRC       ESIGISRYITQKNRHNTPSRLEL KFCPR YKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK
YP_009447471.1 ribosomal protein L33 [Cucurbita maxima]4.4e-2284.85Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK
        MAKGKDARVTVILECTRC       ES+GISRYITQKNRHNTPSRLEL KFCPR YKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK
TrEMBL top hitse value%identityAlignment
A0A109WXY7 50S ribosomal protein L33, chloroplastic1.6e-2286.36Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK
        MAKGKDARVTVILECTRC       ESIGISRYITQKNRHNTPSRLEL KFCPR YKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK
A0A249RZI5 50S ribosomal protein L33, chloroplastic1.6e-2286.36Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK
        MAKGKDARVTVILECTRC       ESIGISRYITQKNRHNTPSRLEL KFCPR YKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK
A0A286NFR9 50S ribosomal protein L33, chloroplastic1.6e-2286.36Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK
        MAKGKDARVTVILECTRC       ESIGISRYITQKNRHNTPSRLEL KFCPR YKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK
G3ETR8 50S ribosomal protein L33, chloroplastic1.6e-2286.36Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK
        MAKGKDARVTVILECTRC       ESIGISRYITQKNRHNTPSRLEL KFCPR YKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK
X2EY68 50S ribosomal protein L33, chloroplastic1.6e-2286.36Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK
        MAKGKDARVTVILECTRC       ESIGISRYITQKNRHNTPSRLEL KFCPR YKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK
SwissProt top hitse value%identityAlignment
A4QKL3 50S ribosomal protein L33, chloroplastic2.1e-2278.79Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK
        MAKGKD RVT+ILECT C       ES GISRYITQKNRHNTPSRLEL KFCP  YKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK
A4QKV2 50S ribosomal protein L33, chloroplastic2.1e-2278.79Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK
        MAKGKD RVT+ILECT C       ES GISRYITQKNRHNTPSRLEL KFCP  YKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK
B1A956 50S ribosomal protein L33, chloroplastic7.1e-2380.3Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK
        MAKGKDARVT+ILECT C       ES GISRYITQKNRHNTPSRLEL KFCP  YKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK
Q09WZ6 50S ribosomal protein L33, chloroplastic1.6e-2278.79Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK
        MAKGKDARVT+ILECT C       ES GISRYITQKNRHNTPSRLEL KFCP  YKHTIHGE+KK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK
Q2QD68 50S ribosomal protein L33, chloroplastic9.8e-2584.85Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK
        MAKGKDARVTVILECTRC       +SIGISRYITQKNRHNTPSRLEL KFCPR YKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK
Arabidopsis top hitse value%identityAlignment
ATCG00640.1 ribosomal protein L333.2e-2377.27Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK
        MAKGKD RVT+ILECT C       E+ GISRYITQKNRHNTPSRLEL KFCP  YKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGGGTAAAGATGCCCGAGTAACAGTTATTTTGGAATGTACTCGTTGTGAATCAATCGGAATTTCCAGATATATTACTCAAAAGAATCGACACAATACCCCTAG
TCGATTGGAATTGGGAAAATTCTGTCCCCGTTATTACAAACATACGATTCATGGGGAGATAAAGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAGGGTAAAGATGCCCGAGTAACAGTTATTTTGGAATGTACTCGTTGTGAATCAATCGGAATTTCCAGATATATTACTCAAAAGAATCGACACAATACCCCTAG
TCGATTGGAATTGGGAAAATTCTGTCCCCGTTATTACAAACATACGATTCATGGGGAGATAAAGAAATAG
Protein sequenceShow/hide protein sequence
MAKGKDARVTVILECTRCESIGISRYITQKNRHNTPSRLELGKFCPRYYKHTIHGEIKK