; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G08070 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G08070
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionbinding partner of ACD11 1-like
Genome locationClcChr02:9085305..9088936
RNA-Seq ExpressionClc02G08070
SyntenyClc02G08070
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652335.1 hypothetical protein Csa_022102 [Cucumis sativus]6.3e-13096.18Show/hide
Query:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE
        QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCE+GESKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVPRREMQEVRV DNAACLTPTE
Subjt:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE

Query:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM
        NN PSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM
Subjt:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM

Query:  AAIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREKFHSAMSNLISK
        AAIFAAERKLN+TGSAVKTSKYVTA AAWLNGAFGKVAKAGQAAGTKTREKFH AMSNLISK
Subjt:  AAIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREKFHSAMSNLISK

KAG7033660.1 Binding partner of ACD11 1 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-12693.13Show/hide
Query:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE
        QTRTVQ ++VSDLATEREIHEFFSFSGEIEH+EIQCE+G+SKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAEN+VPRREMQEVR VDNAA LTPTE
Subjt:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE

Query:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM
        NNFPSIEDSASQPSSG+MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDR+VGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM
Subjt:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM

Query:  AAIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREKFHSAMSNLISK
        AAIFAAERK+N+TGSAVKTSKYVT+GAAWLNGAFGKVAKAGQAAGTKTREKFH AMSNL SK
Subjt:  AAIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREKFHSAMSNLISK

XP_004151849.1 binding partner of ACD11 1 [Cucumis sativus]6.3e-13096.18Show/hide
Query:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE
        QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCE+GESKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVPRREMQEVRV DNAACLTPTE
Subjt:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE

Query:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM
        NN PSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM
Subjt:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM

Query:  AAIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREKFHSAMSNLISK
        AAIFAAERKLN+TGSAVKTSKYVTA AAWLNGAFGKVAKAGQAAGTKTREKFH AMSNLISK
Subjt:  AAIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREKFHSAMSNLISK

XP_008462804.1 PREDICTED: binding partner of ACD11 1-like [Cucumis melo]1.2e-12895.42Show/hide
Query:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE
        QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCE+GESKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVPRRE+QEVRV DNAACLTPTE
Subjt:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE

Query:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM
        NN PS EDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM
Subjt:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM

Query:  AAIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREKFHSAMSNLISK
        AAIFAAERKLN+TGSAVKTSKYVTA AAWLNGAFGKVAKAGQAAGTKTREKFH AMSNLISK
Subjt:  AAIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREKFHSAMSNLISK

XP_038881171.1 binding partner of ACD11 1-like isoform X2 [Benincasa hispida]1.8e-12996.18Show/hide
Query:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE
        QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCE+G+SKTAFVTFRDPKALEIALLLSGATIVDQIVSIS AENHVPRREMQEVRVVDNAACLTPTE
Subjt:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE

Query:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM
        NNFPS EDSASQPSSGKMYVNRAQ VVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQ LHVSDKTM
Subjt:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM

Query:  AAIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREKFHSAMSNLISK
        AAIFAAERKLN+TGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREKFH AMSNL SK
Subjt:  AAIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREKFHSAMSNLISK

TrEMBL top hitse value%identityAlignment
A0A0A0LNE8 RRM domain-containing protein3.1e-13096.18Show/hide
Query:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE
        QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCE+GESKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVPRREMQEVRV DNAACLTPTE
Subjt:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE

Query:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM
        NN PSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM
Subjt:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM

Query:  AAIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREKFHSAMSNLISK
        AAIFAAERKLN+TGSAVKTSKYVTA AAWLNGAFGKVAKAGQAAGTKTREKFH AMSNLISK
Subjt:  AAIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREKFHSAMSNLISK

A0A1S3CIA3 binding partner of ACD11 1-like5.8e-12995.42Show/hide
Query:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE
        QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCE+GESKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVPRRE+QEVRV DNAACLTPTE
Subjt:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE

Query:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM
        NN PS EDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM
Subjt:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM

Query:  AAIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREKFHSAMSNLISK
        AAIFAAERKLN+TGSAVKTSKYVTA AAWLNGAFGKVAKAGQAAGTKTREKFH AMSNLISK
Subjt:  AAIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREKFHSAMSNLISK

A0A5D3BPG7 Binding partner of ACD11 1-like5.8e-12995.42Show/hide
Query:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE
        QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCE+GESKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVPRRE+QEVRV DNAACLTPTE
Subjt:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE

Query:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM
        NN PS EDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM
Subjt:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM

Query:  AAIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREKFHSAMSNLISK
        AAIFAAERKLN+TGSAVKTSKYVTA AAWLNGAFGKVAKAGQAAGTKTREKFH AMSNLISK
Subjt:  AAIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREKFHSAMSNLISK

A0A6J1GFF4 binding partner of ACD11 17.0e-12793.13Show/hide
Query:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE
        QTRTVQ ++VSDLATEREIHEFFSFSGEIEH+EIQCE+G+SKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAEN+VPRREMQEVR VDNAA LTPTE
Subjt:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE

Query:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM
        NNFPSIEDSASQPSSG+MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDR+VGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM
Subjt:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM

Query:  AAIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREKFHSAMSNLISK
        AAIFAAERK+N+TGSAVKTSKYVT+GAAWLNGAFGKVAKAGQAAGTKTREKFH AMSNL SK
Subjt:  AAIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREKFHSAMSNLISK

A0A6J1IKN1 binding partner of ACD11 17.0e-12793.13Show/hide
Query:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE
        QTRTVQ ++VSDLATEREIHEFFSFSGEIEH+EIQCE+G+SKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAEN+VPRREMQEVR VDNAA LTPTE
Subjt:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE

Query:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM
        NNFPSIEDSASQPSSG+MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDR+VGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM
Subjt:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM

Query:  AAIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREKFHSAMSNLISK
        AAIFAAERK+N+TGSAVKTSKYVT+GAAWLNGAFGKVAKAGQAAGTKTREKFH AMSNL SK
Subjt:  AAIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREKFHSAMSNLISK

SwissProt top hitse value%identityAlignment
P87216 Protein vip17.8e-0621.88Show/hide
Query:  VQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFP
        V V ++S   TE++I +FFSF G++ +I  + + GE++TA + F  P A + ALLL  A +    + I+                 ++    + T+    
Subjt:  VQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFP

Query:  SIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAIF
          + +A Q    +        +++ +L++G  +    + K+   D+ + +++             G+ E    G+  VNE+    ++   V +K     F
Subjt:  SIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAIF

Query:  AAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREKFHSAMSNLI
        A   KLN T S V T  +     A           AG +AG K +  +    + L+
Subjt:  AAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREKFHSAMSNLI

Q9LFD5 Binding partner of ACD11 16.9e-4743.03Show/hide
Query:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE
        Q R+V+V ++S  ATE +I EFFSFSGE+E I+IQ       +A+VTF++ +  E A+LLSGA+I DQ V I  A N+ P                    
Subjt:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE

Query:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM
           P+   + +Q S  +  V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G S+VNEK+K+VDQ   V+++T 
Subjt:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM

Query:  AAIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREK
        +   AAE+ +++ GSAV  ++YV  G +W  GAF +VA+A    G KT+EK
Subjt:  AAIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREK

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.1e-5346.83Show/hide
Query:  MQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPT
        M   TV+V +VS  AT+R++ EFFSFSG+I ++E Q E   +K A+VTF+D +  E A+LLSGATIVD  V +S A ++    E          A L P 
Subjt:  MQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPT

Query:  ENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKT
               +DS   P +G   + +A++VV+++LAKG  +G+DA+ KAK+ DEKH+LT++ASAKV SFD+++G T+K+  G  VV EKV+ VDQK  VS+KT
Subjt:  ENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKT

Query:  MAAIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREK
         +AI AAE+ ++N GSA+  ++YV  GA W+ GAF KVAKA +  G K +EK
Subjt:  MAAIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREK

AT5G16840.1 binding partner of acd11 14.9e-4843.03Show/hide
Query:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE
        Q R+V+V ++S  ATE +I EFFSFSGE+E I+IQ       +A+VTF++ +  E A+LLSGA+I DQ V I  A N+ P                    
Subjt:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE

Query:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM
           P+   + +Q S  +  V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G S+VNEK+K+VDQ   V+++T 
Subjt:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM

Query:  AAIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREK
        +   AAE+ +++ GSAV  ++YV  G +W  GAF +VA+A    G KT+EK
Subjt:  AAIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREK

AT5G16840.2 binding partner of acd11 13.8e-4843.43Show/hide
Query:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE
        Q R+V+V ++S  ATE +I EFFSFSGE+E I+IQ     S  A+VTF++ +  E A+LLSGA+I DQ V I  A N+ P                    
Subjt:  QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTE

Query:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM
           P+   + +Q S  +  V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G S+VNEK+K+VDQ   V+++T 
Subjt:  NNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTM

Query:  AAIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREK
        +   AAE+ +++ GSAV  ++YV  G +W  GAF +VA+A    G KT+EK
Subjt:  AAIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREK

AT5G32450.1 RNA binding (RRM/RBD/RNP motifs) family protein5.7e-9773.18Show/hide
Query:  TRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTEN
        TR+VQV +VSDLATEREIHEFFSFSG+IEHIEIQ E G+S+ AFVTF DPKALEIALLLSGATIVDQIV+I+ AEN+V RRE QEVR++DNA  L   E+
Subjt:  TRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTEN

Query:  NFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMA
           + +   +   + + YV++AQ+VVATVLAKGSA+GQDA+NKAKAFDEKH+L A+ASAKV SFD+RVGLTEKL+VGIS VNEKVKSVDQKL VSDKTMA
Subjt:  NFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMA

Query:  AIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREKFHSAMSNLISK
        AIFAAERKLN+TGSAVK+S+YVTAGAAW +GAF KVA+ GQ AG+KT+EKF+ A+SN+ SK
Subjt:  AIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREKFHSAMSNLISK

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.1e-5043.08Show/hide
Query:  MQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENH-VPRREMQEVRVVDNAACLTP
        M   TV+V +VS  ATER++ EFFSFSG+I ++E Q E   SK A+VTF+D +  E A+LL+G+TIVD  V+++ + ++ +P   +  +  +  +     
Subjt:  MQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENH-VPRREMQEVRVVDNAACLTP

Query:  TENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDK
         +++ P+ ED +           +A++VV+ +++KG  +G+DA+ KAK+ DEKH+LT++ASA+V SFD+R+G TEK+  G +VV+EKVK VDQK  V++K
Subjt:  TENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDK

Query:  TMAAIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREK
        T +AI AAE+ ++N GSA+  ++YV  GA W+ GAF +V+KA +  G K +EK
Subjt:  TMAAIFAAERKLNNTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAGTKTREK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGACTCGGACGGTTCAAGTCAAGCACGTTTCGGATCTAGCTACTGAGAGGGAGATTCACGAGTTCTTCTCCTTCTCTGGAGAAATTGAGCACATAGAGATTCAATG
TGAACGAGGGGAATCCAAGACTGCGTTCGTGACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGTTGTTATCGGGAGCAACAATTGTAGATCAGATTGTAAGCATAT
CTCCTGCTGAAAATCATGTTCCAAGAAGAGAAATGCAGGAAGTTCGGGTTGTGGACAATGCTGCATGTCTCACGCCTACAGAAAATAATTTTCCTAGCATTGAGGATTCT
GCGAGCCAGCCTAGCAGTGGAAAAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAACTGTGCTTGCTAAAGGTTCAGCAATTGGACAAGATGCCATGAACAAGGCAAA
AGCATTTGATGAAAAACATCGCTTAACGGCTAGTGCATCTGCAAAAGTATTATCCTTTGACAGAAGGGTTGGGCTCACCGAGAAATTGACAGTTGGGATATCAGTGGTTA
ATGAGAAAGTCAAGTCTGTAGATCAAAAGCTTCACGTTTCAGATAAAACAATGGCTGCAATCTTTGCAGCTGAGAGGAAACTCAACAATACGGGATCTGCTGTCAAAACA
AGCAAGTATGTGACAGCAGGAGCTGCTTGGCTAAATGGTGCTTTTGGCAAGGTCGCAAAAGCAGGGCAGGCAGCAGGTACAAAAACCAGAGAGAAGTTCCATTCGGCTAT
GTCAAACTTAATTTCAAAGGTGCGAACCCCCAGTTGTTGCCTAAGCTTAAAACTTACCTCACTTGGCTTGGCTGCTTCTATTTTCAGTGGGGTATTCAAATGA
mRNA sequenceShow/hide mRNA sequence
CTTTCAAATTGCCTCTAACCTCCAACCTGTACAACTTCCTCTCTCTCTCTCTCTCTTTCTGCAAGAAATTCCTCGAGTTCTTCGATCATTAGCTATGCAGACTCGGACGG
TTCAAGTCAAGCACGTTTCGGATCTAGCTACTGAGAGGGAGATTCACGAGTTCTTCTCCTTCTCTGGAGAAATTGAGCACATAGAGATTCAATGTGAACGAGGGGAATCC
AAGACTGCGTTCGTGACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGTTGTTATCGGGAGCAACAATTGTAGATCAGATTGTAAGCATATCTCCTGCTGAAAATCA
TGTTCCAAGAAGAGAAATGCAGGAAGTTCGGGTTGTGGACAATGCTGCATGTCTCACGCCTACAGAAAATAATTTTCCTAGCATTGAGGATTCTGCGAGCCAGCCTAGCA
GTGGAAAAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAACTGTGCTTGCTAAAGGTTCAGCAATTGGACAAGATGCCATGAACAAGGCAAAAGCATTTGATGAAAAA
CATCGCTTAACGGCTAGTGCATCTGCAAAAGTATTATCCTTTGACAGAAGGGTTGGGCTCACCGAGAAATTGACAGTTGGGATATCAGTGGTTAATGAGAAAGTCAAGTC
TGTAGATCAAAAGCTTCACGTTTCAGATAAAACAATGGCTGCAATCTTTGCAGCTGAGAGGAAACTCAACAATACGGGATCTGCTGTCAAAACAAGCAAGTATGTGACAG
CAGGAGCTGCTTGGCTAAATGGTGCTTTTGGCAAGGTCGCAAAAGCAGGGCAGGCAGCAGGTACAAAAACCAGAGAGAAGTTCCATTCGGCTATGTCAAACTTAATTTCA
AAGGTGCGAACCCCCAGTTGTTGCCTAAGCTTAAAACTTACCTCACTTGGCTTGGCTGCTTCTATTTTCAGTGGGGTATTCAAATGAGTTTCTTTAATTCTATTTCTTCA
GCTTATTTTTTCTTGAGGACTGTACTCTATTGTTTTTTTTTTTTTTTTTCAAGTATTATATATATTTTTTATATTGTTCATATTCTTTAATTACAAGGGTGTTTGGCTGA
TGACAATTTTGCATTTGTAAGATTGGTTATGGAAGTGTAAAGAAAATCCAATTATGGTTTGTCTTATACTCTTAATTATTTGTTTAGGTTAGGAGTATAAGTGTGTG
Protein sequenceShow/hide protein sequence
MQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCERGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDS
ASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNNTGSAVKT
SKYVTAGAAWLNGAFGKVAKAGQAAGTKTREKFHSAMSNLISKVRTPSCCLSLKLTSLGLAASIFSGVFK