| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6605170.1 RNA polymerase sigma factor sigA, partial [Cucurbita argyrosperma subsp. sororia] | 2.9e-262 | 92.91 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEK+LY NDHRLGQ QVS TK+V+IAK SA+F PSYP SNRH QCIKA+KEHVDTPSSPTAEPWLHNTTIWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTLRGKTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD RGKT KKVPVTCSGVSARQRRMSSKRKIQSKH FMAQPKISKQL+P+ISPELLQNRL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTLRGKTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: LSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
+SEE+L H+EVVRLSKKIKVGLALEE KTRLKERL CEPSEEQLAISL+ISRAELRSRV+ECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: LSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
FPSLNGLPGETHHSYIADN LENNPWHGTDTW LK EVN+LIN+TL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK RK
Subjt: FPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
|
|
| XP_016902935.1 PREDICTED: RNA polymerase sigma factor sigA [Cucumis melo] | 2.2e-270 | 95.87 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHS-QCIKALKEHVDTPSSPTAEPWLHNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEKILYAND+RLGQTQVSPTK+V+IAKSSANF PSYPLSNRHS QCIKA+KEHV+TPSSPTAEPWL NTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHS-QCIKALKEHVDTPSSPTAEPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTLRGKTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD R KTLKKVPVTCSGVSARQRRMSSKRKIQSKH FMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTLRGKTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
LLSEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCEPSE+QLAISLKISRAELRSR++ECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVN+LIN+TLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
|
|
| XP_022148631.1 RNA polymerase sigma factor sigA [Momordica charantia] | 1.5e-263 | 93.31 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDF EK+LYANDHRLGQ+QVSPTK+V+IAKSSANF PS+P SNRH+QCIKA+KEHVDTPSSPT EPWL N+T WEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTLRGKTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKGL
E DLKCTVEALLLLQKSMLEKQWNLSFEQTV TD RG+T KKVPVTCSGVSARQRRMSSKRKIQSK+ FM QPKISKQLR TISPELLQ RLKGYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTLRGKTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: LSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
+SEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSE+QLAISLKISR ELRSRVIECSLA+EKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: LSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
FPSLNGLPGETHHSYIADN LEN+PWHGTDTWILKAEVN+LIN+TLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Subjt: FPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
|
|
| XP_023533104.1 RNA polymerase sigma factor sigA-like [Cucurbita pepo subsp. pepo] | 1.7e-262 | 92.91 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEK+LY NDHRLGQ QVS TK+V+IAK SA+F PSYP SNRH QCIKA+KEHVDTPSSPTAEPWLHNTTIWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTLRGKTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD RGKT KKVPVTCSGVSARQRRMSSKRKIQSKH F+AQPKISKQL+P+ISPELLQNRL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTLRGKTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: LSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
+SEE+L H+EVVRLSKKIKVGLALEE KTRLKERL CEPSEEQLAISL+ISRAELRSRV+ECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: LSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
FPSLNGLPGETHHSYIADN LENNPWHGTDTWILK EVN+LIN+TL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK RK
Subjt: FPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
|
|
| XP_038902049.1 RNA polymerase sigma factor sigA [Benincasa hispida] | 4.7e-273 | 96.86 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYA-NDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWED
MMATAAIIGLGAAKRLLNSSSYYSDFTEKILY NDHRLGQTQVSPTK+V+IAKSSANF PSYP SNRHSQCIKA+KEHVDTPSSPTAEPWLHNTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYA-NDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTLRGKTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
EE DLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD RGKT KKVPVTCSGVSARQRRMSSKRKIQSKH FMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTLRGKTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSE+QLAISLKISRAELRSRV+ECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVN+LIN+TLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LQR2 RNA_pol_sigma70 domain-containing protein | 1.8e-262 | 93.71 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHS-QCIKALKEHVDTPSSPTAEPWLHNTTIWED
MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYAND+RLGQTQVS +K+V+IAKSSANF P YP SNRHS QCIKA+KEHV+TPSSP AEPW HNTT WED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHS-QCIKALKEHVDTPSSPTAEPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTLRGKTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
EET+LK TVEALLLLQKSMLEKQW+LSFEQTVSTDT + KTLKKVPVTCSGVSARQRRMSSKRKIQSKH FMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTLRGKTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
LLSEELLSHAEVVRLSKKIKVGL LEERKTRLK+RLGCEPSE+QLAISLKISRAELRSR++E SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKV+NATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILK EVN+LIN+TLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
|
|
| A0A1S4E4N5 RNA polymerase sigma factor sigA | 1.1e-270 | 95.87 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHS-QCIKALKEHVDTPSSPTAEPWLHNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEKILYAND+RLGQTQVSPTK+V+IAKSSANF PSYPLSNRHS QCIKA+KEHV+TPSSPTAEPWL NTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHS-QCIKALKEHVDTPSSPTAEPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTLRGKTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD R KTLKKVPVTCSGVSARQRRMSSKRKIQSKH FMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTLRGKTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
LLSEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCEPSE+QLAISLKISRAELRSR++ECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVN+LIN+TLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
|
|
| A0A5D3BME8 RNA polymerase sigma factor sigA | 1.1e-270 | 95.87 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHS-QCIKALKEHVDTPSSPTAEPWLHNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEKILYAND+RLGQTQVSPTK+V+IAKSSANF PSYPLSNRHS QCIKA+KEHV+TPSSPTAEPWL NTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHS-QCIKALKEHVDTPSSPTAEPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTLRGKTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD R KTLKKVPVTCSGVSARQRRMSSKRKIQSKH FMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTLRGKTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
LLSEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCEPSE+QLAISLKISRAELRSR++ECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVN+LIN+TLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
|
|
| A0A6J1D604 RNA polymerase sigma factor sigA | 7.3e-264 | 93.31 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDF EK+LYANDHRLGQ+QVSPTK+V+IAKSSANF PS+P SNRH+QCIKA+KEHVDTPSSPT EPWL N+T WEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTLRGKTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKGL
E DLKCTVEALLLLQKSMLEKQWNLSFEQTV TD RG+T KKVPVTCSGVSARQRRMSSKRKIQSK+ FM QPKISKQLR TISPELLQ RLKGYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTLRGKTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: LSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
+SEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSE+QLAISLKISR ELRSRVIECSLA+EKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: LSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
FPSLNGLPGETHHSYIADN LEN+PWHGTDTWILKAEVN+LIN+TLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Subjt: FPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
|
|
| A0A6J1KWY7 RNA polymerase sigma factor sigA-like | 9.0e-262 | 92.72 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEK+LY NDHRLGQ QVS TK V+IAK SA+F PSY SNRH QCIKA+KEHVDTPSSPTAEPWLHNTTIWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTLRGKTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD RGKT KKVPVTCSGVSARQRRMSSKRKIQSKH FMAQPKISKQL+P ISPELLQNRL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTLRGKTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: LSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
+SEE+L H+EVVRLSKKIKVGLALEE KTRLKERL C+PSEEQLAISL+ISRAELRSRV+ECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: LSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
FPSLNGLPGETHHSYIADN LENNPWHGTDTWILK EVN+LIN+TL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK RK
Subjt: FPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| O22056 RNA polymerase sigma factor sigB | 1.1e-38 | 36.22 | Show/hide |
Query: SEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIG
S +LL+ E LS I+ L LE +T L ER G +P+ Q A + + + LR R+ +L ++K+ SN+RLV+SIA+ Y G + DLVQ G G
Subjt: SEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIG
Query: LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
L+RG EKFD++KGFK STY +WWI+Q V ++L + SR +RLP H+ E ++ A+ +L E G P + IAE+ +S K++ + SLD++
Subjt: LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNCLENNPWHGTDTWIL-----KAEVNELINITLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKK
+ N P E IAD P T IL + +++++++ +LG RE+++IR G+ D T +EI + +G+SRERVRQ+ A KLK
Subjt: FPSLNGLPGETHHSYIADNCLENNPWHGTDTWIL-----KAEVNELINITLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKK
Query: AAKTRKMEAMLL
+ ++ L+
Subjt: AAKTRKMEAMLL
|
|
| O24629 RNA polymerase sigma factor sigA | 1.4e-190 | 69.38 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWE---
MATAA+IGL KRLL+SS Y+SD TEK L NDH Q ++ TK+ I AK ++N+ PS+P SNRH+Q KALKE VD S T +PWL N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWE---
Query: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTLRGKTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNR
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ T+ KK+PV TCSG+SARQRR+ +K+K H +S +
Subjt: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTLRGKTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNR
Query: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
++GYVKG++SE++LSH EVVRLSKKIK GL L++ K+RLK+RLGCEPS+EQLA+SLKISRAEL++ ++EC LAREKLAMSNVRLVMSIAQRYDN+GAEM+
Subjt: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISK
DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK+RLQEKGITPS+DRIAESLNMS+KKV+NATEA+SK
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISK
Query: VFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKL
VFSLDR+AFPSLNGLPGETHHSYIAD LENNPWHG D LK EV++LI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVALEKL
Subjt: VFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKL
Query: KKAAKTRKMEAMLLKH
K AA+ RKMEAM+LK+
Subjt: KKAAKTRKMEAMLLKH
|
|
| P26683 RNA polymerase sigma factor SigA | 4.9e-39 | 33.94 | Show/hide |
Query: KISKQLRPTISPE--LLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMS
K +K R T S + ++ ++ Y++ + LL E + L++KI L LE + RL E+L +P + + A ++++ R R+ A++K+ S
Subjt: KISKQLRPTISPE--LLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMS
Query: NVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLDR
N+RLV+SIA++Y N G DL+Q G +GL+R EKFD KG+K STY WWIRQ ++RA+ + SRT+RLP HL+E + I + K+ QE G P+ +
Subjt: NVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLDR
Query: IAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDN-E
IA + M+ +K+ K+A IS + +E L GET ++ N +L+ ++ ++++ +L RER+++RL +GLD+
Subjt: IAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDN-E
Query: CLTWEEISKRIGLSRERVRQVGLVALEKLK
T EEI + ++RER+RQ+ AL KL+
Subjt: CLTWEEISKRIGLSRERVRQVGLVALEKLK
|
|
| P38023 RNA polymerase sigma factor SigA1 | 1.7e-39 | 35.05 | Show/hide |
Query: AQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAM
A K ++R T + ++ ++ Y++ + LL E + L+++I LALE + L E+L PS+ + A ++ E R R+ A++K+
Subjt: AQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAM
Query: SNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLD
SN+RLV+SIA++Y N G DL+Q G +GL+R EKFD KG+K STY WWIRQ ++RA+ + SRT+RLP HL+E + I + K+ QE G P+ +
Subjt: SNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLD
Query: RIAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDN-
IA + M+ +K+ K+A IS + +E L GET +A N L E E + TL RER+++RL +GLD+
Subjt: RIAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDN-
Query: ECLTWEEISKRIGLSRERVRQVGLVALEKLK
T EEI + ++RER+RQ+ AL KL+
Subjt: ECLTWEEISKRIGLSRERVRQVGLVALEKLK
|
|
| Q0J7T6 RNA polymerase sigma factor sigA | 2.3e-129 | 50.47 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNR---------------HSQCIKALKEHVD-----
M AT A+IGL A RLL++S F L + LG + +F P P + + +Q ++AL+ H
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNR---------------HSQCIKALKEHVD-----
Query: TPSSPTAEPWLHNTTIWEDEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTL------RGKTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQP
P P P + DL+ ++EA++LLQ+SMLEKQW L F+ + + V V S VSARQRRMS +R+ ++K+
Subjt: TPSSPTAEPWLHNTTIWEDEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTL------RGKTLKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQP
Query: KISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNV
+SPEL+Q+R + Y++G +S+ELL+H +VV LS KIK G+ L++++++LKE+LG EPS +QLA SLKIS ELRSR+ E LARE L MSN+
Subjt: KISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNV
Query: RLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAE
RLV+SIAQ+YDN+G E+ADL+QGGLIGLLRGIEKFD+S+GF+ISTYVYWWIRQGVSRAL ENS+T RLPT+LHERL IR AK L+++GI P+++ IA
Subjt: RLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAE
Query: SLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRI
SLN+S+KKV NATEA++KV SLD++AFPSLNGLPGET HSYI D + N+PWHG + W LK EVN+L+N TL +RER+IIRLYHG+ +C TWE+IS++
Subjt: SLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRI
Query: GLSRERVRQVGLVALEKLKKAAKTRKMEAML
GLSRERVRQVGL+A+EKLK AA+ + +EA+L
Subjt: GLSRERVRQVGLVALEKLKKAAKTRKMEAML
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G08540.1 RNApolymerase sigma subunit 2 | 7.7e-40 | 36.22 | Show/hide |
Query: SEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIG
S +LL+ E LS I+ L LE +T L ER G +P+ Q A + + + LR R+ +L ++K+ SN+RLV+SIA+ Y G + DLVQ G G
Subjt: SEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIG
Query: LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
L+RG EKFD++KGFK STY +WWI+Q V ++L + SR +RLP H+ E ++ A+ +L E G P + IAE+ +S K++ + SLD++
Subjt: LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNCLENNPWHGTDTWIL-----KAEVNELINITLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKK
+ N P E IAD P T IL + +++++++ +LG RE+++IR G+ D T +EI + +G+SRERVRQ+ A KLK
Subjt: FPSLNGLPGETHHSYIADNCLENNPWHGTDTWIL-----KAEVNELINITLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKK
Query: AAKTRKMEAMLL
+ ++ L+
Subjt: AAKTRKMEAMLL
|
|
| AT1G64860.1 sigma factor A | 9.7e-192 | 69.38 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWE---
MATAA+IGL KRLL+SS Y+SD TEK L NDH Q ++ TK+ I AK ++N+ PS+P SNRH+Q KALKE VD S T +PWL N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWE---
Query: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTLRGKTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNR
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ T+ KK+PV TCSG+SARQRR+ +K+K H +S +
Subjt: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTLRGKTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNR
Query: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
++GYVKG++SE++LSH EVVRLSKKIK GL L++ K+RLK+RLGCEPS+EQLA+SLKISRAEL++ ++EC LAREKLAMSNVRLVMSIAQRYDN+GAEM+
Subjt: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISK
DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK+RLQEKGITPS+DRIAESLNMS+KKV+NATEA+SK
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISK
Query: VFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKL
VFSLDR+AFPSLNGLPGETHHSYIAD LENNPWHG D LK EV++LI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVALEKL
Subjt: VFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKL
Query: KKAAKTRKMEAMLLKH
K AA+ RKMEAM+LK+
Subjt: KKAAKTRKMEAMLLKH
|
|
| AT1G64860.2 sigma factor A | 3.0e-177 | 68.26 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWE---
MATAA+IGL KRLL+SS Y+SD TEK L NDH Q ++ TK+ I AK ++N+ PS+P SNRH+Q KALKE VD S T +PWL N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWE---
Query: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTLRGKTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNR
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ T+ KK+PV TCSG+SARQRR+ +K+K H +S +
Subjt: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTLRGKTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNR
Query: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
++GYVKG++SE++LSH EVVRLSKKIK GL L++ K+RLK+RLGCEPS+EQLA+SLKISRAEL++ ++EC LAREKLAMSNVRLVMSIAQRYDN+GAEM+
Subjt: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISK
DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK+RLQEKGITPS+DRIAESLNMS+KKV+NATEA+SK
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISK
Query: VFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRI
VFSLDR+AFPSLNGLPGETHHSYIAD LENNPWHG D LK EV++LI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRI
Subjt: VFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRI
|
|
| AT2G36990.1 RNApolymerase sigma-subunit F | 4.0e-36 | 32.59 | Show/hide |
Query: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
L+ ++ G +++LL+ E L I+ L LE+ KT+L+ + GCEP+ + A ++ IS L+S + +REKL +N+RLV+ IA++Y N G
Subjt: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA-KVRLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
DL+Q G +GL++ +EKF G + +TY YWWIRQ + +++ +NSRT+RLP +++ LG + A K +QE PS + +A + +S +K+
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA-KVRLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALE
S+ + + + T D+ +E P +++ V L+N+ L +ER II+L G+D + + EI + GLS+ERVRQ+ AL
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALE
Query: KLKKAAKTRKMEA
+LK+ + + A
Subjt: KLKKAAKTRKMEA
|
|
| AT5G13730.1 sigma factor 4 | 3.7e-34 | 33.14 | Show/hide |
Query: SSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSR
S KR+ + + + ++ + E + V G LS E V+L +K G LE T ++E E +++ L R + +
Subjt: SSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEEQLAISLKISRAELRSR
Query: VIEC----SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR
E AREK+ RLV+SIA Y G + DL+Q G IGLLRG E+FD +G+K+STYVYWWI+Q + RA+ SR ++LP + E +
Subjt: VIEC----SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR
Query: NAKVRLQEK-GITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREI
A L K PS + IAE LN++ V+ A E SLDR A + G I E P +K E+ +L+ +L RE +
Subjt: NAKVRLQEK-GITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREI
Query: IRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLK
+ LY GL+ E +++EEI K + LSRERVRQ+ +AL+KL+
Subjt: IRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLK
|
|
