; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G08740 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G08740
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr02:10584546..10586927
RNA-Seq ExpressionClc02G08740
SyntenyClc02G08740
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025724.1 uncharacterized protein E6C27_scaffold653G00030 [Cucumis melo var. makuwa]1.1e-0429.86Show/hide
Query:  SHFCVVDVISNVRCHFVLAMWETIHKKIMQNPFDKVLYLEDETRKIFKAISDIHGDNLHPHKKFVDEYFQKV----------------------------
        SHFCV ++IS++R    + + E++ +KI+  PF++V  L+ E RKIF AI+    +NL   K+ VD YFQ V                            
Subjt:  SHFCVVDVISNVRCHFVLAMWETIHKKIMQNPFDKVLYLEDETRKIFKAISDIHGDNLHPHKKFVDEYFQKV----------------------------

Query:  --LYDESSTLAKKNTLLERAAEALQEEEELTIKLEAVKTKQIEM
            DE+  L + +T+  R A    +E +L  KL+ V+T+  ++
Subjt:  --LYDESSTLAKKNTLLERAAEALQEEEELTIKLEAVKTKQIEM

KAA0050733.1 uncharacterized protein E6C27_scaffold560G00370 [Cucumis melo var. makuwa]3.9e-0734.75Show/hide
Query:  LAASKASHFCVVDVISNVRCHFVLAMWETIHKKIMQNPFDKVLYLEDETRKIFKAISDIHGDNLHPHKKFVDEYFQKVLYDESSTLAKKNTLLERAAEAL
        +  S+ SHFC  ++IS++R    + +WE++ +KI++ PF++V  LE E RKIF AI+    +NL   K+ VD YFQ V   E+    + + LL+   +A 
Subjt:  LAASKASHFCVVDVISNVRCHFVLAMWETIHKKIMQNPFDKVLYLEDETRKIFKAISDIHGDNLHPHKKFVDEYFQKVLYDESSTLAKKNTLLERAAEAL

Query:  QEEEELTIKLEAVKTKQI
          E +  +K   V   +I
Subjt:  QEEEELTIKLEAVKTKQI

TYK06155.1 uncharacterized protein E5676_scaffold287G00030 [Cucumis melo var. makuwa]3.7e-0529.86Show/hide
Query:  SHFCVVDVISNVRCHFVLAMWETIHKKIMQNPFDKVLYLEDETRKIFKAISDIHGDNLHPHKKFVDEYFQKV----------------------------
        SHFCV ++IS++R    + + E++ +KI++ PF++V  L+ E RKIF AI+    +NL   K+ VD YFQ V                            
Subjt:  SHFCVVDVISNVRCHFVLAMWETIHKKIMQNPFDKVLYLEDETRKIFKAISDIHGDNLHPHKKFVDEYFQKV----------------------------

Query:  --LYDESSTLAKKNTLLERAAEALQEEEELTIKLEAVKTKQIEM
            DE+  L + +T+  R A    +E +L  KL+ V+T+  ++
Subjt:  --LYDESSTLAKKNTLLERAAEALQEEEELTIKLEAVKTKQIEM

XP_031739998.1 uncharacterized protein LOC116403342 [Cucumis sativus]3.7e-0530.4Show/hide
Query:  LAASKASHFCVVDVISNVRCHFVLAMWETIHKKIMQNPFDKVLYLEDETRKIFKAISDIHGDNLHPHKKFVDEYFQKVLYDESSTLAKKNTLLERAAEAL
        +  S+ SHFC   +IS++R    + +WE + +KI++ PF+++  LE E  KIF AI+    DNL   ++ V+ YFQ V   E+      + LL+   +  
Subjt:  LAASKASHFCVVDVISNVRCHFVLAMWETIHKKIMQNPFDKVLYLEDETRKIFKAISDIHGDNLHPHKKFVDEYFQKVLYDESSTLAKKNTLLERAAEAL

Query:  QEEEELTIKLEAVKTKQIEMKAGAA
          E +  +K   V   +I  +   A
Subjt:  QEEEELTIKLEAVKTKQIEMKAGAA

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]7.4e-0628Show/hide
Query:  LAASKASHFCVVDVISNVRCHFVLAMWETIHKKIMQNPFDKVLYLEDETRKIFKAISDIHGDNLHPHKKFVDEYFQKV----------------------
        +  S+ SHFC   +IS++R    + +WE + +KI++ PF+++  LE E  KIF AI+    DNL   ++ V+ YFQ V                      
Subjt:  LAASKASHFCVVDVISNVRCHFVLAMWETIHKKIMQNPFDKVLYLEDETRKIFKAISDIHGDNLHPHKKFVDEYFQKV----------------------

Query:  --------LYDESSTLAKKNTLLERAAEALQEEEELTIKLEAVKTKQIEM
                  DE+  LA+ NT   R      +E +L  KL+ V+ +  ++
Subjt:  --------LYDESSTLAKKNTLLERAAEALQEEEELTIKLEAVKTKQIEM

TrEMBL top hitse value%identityAlignment
A0A5A7SJ85 Uncharacterized protein5.2e-0529.86Show/hide
Query:  SHFCVVDVISNVRCHFVLAMWETIHKKIMQNPFDKVLYLEDETRKIFKAISDIHGDNLHPHKKFVDEYFQKV----------------------------
        SHFCV ++IS++R    + + E++ +KI+  PF++V  L+ E RKIF AI+    +NL   K+ VD YFQ V                            
Subjt:  SHFCVVDVISNVRCHFVLAMWETIHKKIMQNPFDKVLYLEDETRKIFKAISDIHGDNLHPHKKFVDEYFQKV----------------------------

Query:  --LYDESSTLAKKNTLLERAAEALQEEEELTIKLEAVKTKQIEM
            DE+  L + +T+  R A    +E +L  KL+ V+T+  ++
Subjt:  --LYDESSTLAKKNTLLERAAEALQEEEELTIKLEAVKTKQIEM

A0A5A7SJR1 Uncharacterized protein4.4e-0433.33Show/hide
Query:  LAASKASHFCVVDVISNVRCHFVLAMWETIHKKIMQNPFDKVLYLEDETRKIFKAISDIHGDNLHPHKKFVDEYFQKVLYDESSTLAKKNTLLERAAEA
        + AS+ SHFC  ++IS+++   V+ +WE++ +KI++  F++V  LE E  KIF AI     ++L   ++ V  YFQ V   E+      + LL+   +A
Subjt:  LAASKASHFCVVDVISNVRCHFVLAMWETIHKKIMQNPFDKVLYLEDETRKIFKAISDIHGDNLHPHKKFVDEYFQKVLYDESSTLAKKNTLLERAAEA

A0A5A7U4C3 Uncharacterized protein1.9e-0734.75Show/hide
Query:  LAASKASHFCVVDVISNVRCHFVLAMWETIHKKIMQNPFDKVLYLEDETRKIFKAISDIHGDNLHPHKKFVDEYFQKVLYDESSTLAKKNTLLERAAEAL
        +  S+ SHFC  ++IS++R    + +WE++ +KI++ PF++V  LE E RKIF AI+    +NL   K+ VD YFQ V   E+    + + LL+   +A 
Subjt:  LAASKASHFCVVDVISNVRCHFVLAMWETIHKKIMQNPFDKVLYLEDETRKIFKAISDIHGDNLHPHKKFVDEYFQKVLYDESSTLAKKNTLLERAAEAL

Query:  QEEEELTIKLEAVKTKQI
          E +  +K   V   +I
Subjt:  QEEEELTIKLEAVKTKQI

A0A5D3C453 Uncharacterized protein1.8e-0529.86Show/hide
Query:  SHFCVVDVISNVRCHFVLAMWETIHKKIMQNPFDKVLYLEDETRKIFKAISDIHGDNLHPHKKFVDEYFQKV----------------------------
        SHFCV ++IS++R    + + E++ +KI++ PF++V  L+ E RKIF AI+    +NL   K+ VD YFQ V                            
Subjt:  SHFCVVDVISNVRCHFVLAMWETIHKKIMQNPFDKVLYLEDETRKIFKAISDIHGDNLHPHKKFVDEYFQKV----------------------------

Query:  --LYDESSTLAKKNTLLERAAEALQEEEELTIKLEAVKTKQIEM
            DE+  L + +T+  R A    +E +L  KL+ V+T+  ++
Subjt:  --LYDESSTLAKKNTLLERAAEALQEEEELTIKLEAVKTKQIEM

A0A5D3DHK0 Uncharacterized protein4.4e-0433.33Show/hide
Query:  LAASKASHFCVVDVISNVRCHFVLAMWETIHKKIMQNPFDKVLYLEDETRKIFKAISDIHGDNLHPHKKFVDEYFQKVLYDESSTLAKKNTLLERAAEA
        + AS+ SHFC  ++IS+++   V+ +WE++ +KI++  F++V  LE E  KIF AI     ++L   ++ V  YFQ V   E+      + LL+   +A
Subjt:  LAASKASHFCVVDVISNVRCHFVLAMWETIHKKIMQNPFDKVLYLEDETRKIFKAISDIHGDNLHPHKKFVDEYFQKVLYDESSTLAKKNTLLERAAEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCCTGGCTGCTTCTAAGGCTTCCCATTTTTGTGTTGTCGATGTAATTTCTAATGTTCGATGTCACTTTGTTTTGGCCATGTGGGAGACAATACATAAGAAAATCAT
GCAAAATCCTTTTGACAAAGTTCTTTACCTTGAAGATGAAACTCGCAAGATATTTAAGGCGATTTCTGACATTCATGGTGATAACCTTCATCCTCACAAAAAATTCGTTG
ATGAATATTTTCAAAAGGTACTATATGATGAAAGCAGTACACTTGCCAAGAAGAATACACTTCTGGAGCGTGCTGCAGAGGCATTGCAGGAAGAAGAAGAATTGACAATC
AAGCTAGAAGCTGTCAAAACTAAACAAATTGAGATGAAAGCTGGTGCCGCGGCGCTATGGAACATGCTAGGGCTATATCCAAAACTGTTGCTATCAGGTTTTAGCCCCGC
GGCAGCGCCGTCCAAGCCCCGCGATGCTCGTCGCGGCAGCGCCGTCCAAGCGCCGCGACGCTGTCATGCGTTCAATAAGGATGCGTCGAGGCAACGCCATCTCGGCGCCG
CGATGCTACTATGCGTCCAGAACGATGCGTTTATGTTTCAGCGCTGCGACGCTATCCCAAAATTCGCCCTTTTGAGCTTTTCAGCTCTTTTTCGCCGTATTCTTGCTAGG
TTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCCTGGCTGCTTCTAAGGCTTCCCATTTTTGTGTTGTCGATGTAATTTCTAATGTTCGATGTCACTTTGTTTTGGCCATGTGGGAGACAATACATAAGAAAATCAT
GCAAAATCCTTTTGACAAAGTTCTTTACCTTGAAGATGAAACTCGCAAGATATTTAAGGCGATTTCTGACATTCATGGTGATAACCTTCATCCTCACAAAAAATTCGTTG
ATGAATATTTTCAAAAGGTACTATATGATGAAAGCAGTACACTTGCCAAGAAGAATACACTTCTGGAGCGTGCTGCAGAGGCATTGCAGGAAGAAGAAGAATTGACAATC
AAGCTAGAAGCTGTCAAAACTAAACAAATTGAGATGAAAGCTGGTGCCGCGGCGCTATGGAACATGCTAGGGCTATATCCAAAACTGTTGCTATCAGGTTTTAGCCCCGC
GGCAGCGCCGTCCAAGCCCCGCGATGCTCGTCGCGGCAGCGCCGTCCAAGCGCCGCGACGCTGTCATGCGTTCAATAAGGATGCGTCGAGGCAACGCCATCTCGGCGCCG
CGATGCTACTATGCGTCCAGAACGATGCGTTTATGTTTCAGCGCTGCGACGCTATCCCAAAATTCGCCCTTTTGAGCTTTTCAGCTCTTTTTCGCCGTATTCTTGCTAGG
TTTTGA
Protein sequenceShow/hide protein sequence
MSLAASKASHFCVVDVISNVRCHFVLAMWETIHKKIMQNPFDKVLYLEDETRKIFKAISDIHGDNLHPHKKFVDEYFQKVLYDESSTLAKKNTLLERAAEALQEEEELTI
KLEAVKTKQIEMKAGAAALWNMLGLYPKLLLSGFSPAAAPSKPRDARRGSAVQAPRRCHAFNKDASRQRHLGAAMLLCVQNDAFMFQRCDAIPKFALLSFSALFRRILAR
F