CuGenDBv2

Gene ID	Clc02G08865
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	ThiF domain-containing protein
Genome location	ClcChr02:11096043..11096435
RNA-Seq Expression	Clc02G08865
Synteny	Clc02G08865
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

PON83836.1 hypothetical protein TorRG33x02_203870 [Trema orientale]

8.8e-23

Show/hide

Query:  MKRRVQSSPKSYTNRTEQFHKYLKPGALALMRDSQISAKWYRFNSISQIYLRRTSLLESSPLPTTGQSEIDMVDDFPSLVGRVYGPLCLKRKKLAAIKST
        M RR ++  +S  +RTE F KYLKPGALA +RDS+ISA+ +R  S++QI   R+S   S P  T GQ  +  +D FP   GRV+GP C +RKKL A K+ 
Subjt:  MKRRVQSSPKSYTNRTEQFHKYLKPGALALMRDSQISAKWYRFNSISQIYLRRTSLLESSPLPTTGQSEIDMVDDFPSLVGRVYGPLCLKRKKLAAIKST

Query:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH
         FPS N  +P  D   DPI+DVF++D+AAH
Subjt:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH

XP_022944248.1 uncharacterized protein LOC111448755 [Cucurbita moschata]

1.3e-47

77.69

Show/hide

Query:  MKRRVQSSPKSYTNRTEQFHKYLKPGALALMRDSQISAKWYRFNSISQIYLRRTSLLESSPLPTTGQSEIDMVDDFPSLVGRVYGPLCLKRKKLAAIKST
        M RRVQ S K   NRTEQFHKYLKPGALA +RDS+ISA+ YR+NS+SQIYLRRT+  ESSPL + GQSEID VDDFPSL GRVYGPLCLKRKK + IKST
Subjt:  MKRRVQSSPKSYTNRTEQFHKYLKPGALALMRDSQISAKWYRFNSISQIYLRRTSLLESSPLPTTGQSEIDMVDDFPSLVGRVYGPLCLKRKKLAAIKST

Query:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH
        WFPSPNLQTPT DL+ D IID FNSDVAAH
Subjt:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH

XP_022986202.1 uncharacterized protein LOC111484017 [Cucurbita maxima]

7.1e-49

79.23

Show/hide

Query:  MKRRVQSSPKSYTNRTEQFHKYLKPGALALMRDSQISAKWYRFNSISQIYLRRTSLLESSPLPTTGQSEIDMVDDFPSLVGRVYGPLCLKRKKLAAIKST
        M RRVQ S K   NRTEQFHK+LKPGALA MRDS+ISA+ YR+NS+SQI+LRRT+ LESSPL   GQSEID VDDFPSL GRVYGPLCLKRKKLA IK+T
Subjt:  MKRRVQSSPKSYTNRTEQFHKYLKPGALALMRDSQISAKWYRFNSISQIYLRRTSLLESSPLPTTGQSEIDMVDDFPSLVGRVYGPLCLKRKKLAAIKST

Query:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH
        WFPSPNLQTPTTDLT D I+D FNSDVAAH
Subjt:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH

XP_023513131.1 uncharacterized protein LOC111777660 [Cucurbita pepo subsp. pepo]

9.9e-51

81.54

Show/hide

Query:  MKRRVQSSPKSYTNRTEQFHKYLKPGALALMRDSQISAKWYRFNSISQIYLRRTSLLESSPLPTTGQSEIDMVDDFPSLVGRVYGPLCLKRKKLAAIKST
        M RRVQ S K   NRTEQFHKYLKPGALA MRDS+ISA+ YR+NS+SQIYLRRT+ LESSPL   GQSEID VDDFPSL GRVYGPLCLKRKK A IKST
Subjt:  MKRRVQSSPKSYTNRTEQFHKYLKPGALALMRDSQISAKWYRFNSISQIYLRRTSLLESSPLPTTGQSEIDMVDDFPSLVGRVYGPLCLKRKKLAAIKST

Query:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH
        WFPSPNLQTPTTDLT +PIID FNSDVAAH
Subjt:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH

XP_038902395.1 uncharacterized protein LOC120089036 [Benincasa hispida]

1.6e-56

83.85

Show/hide

Query:  MKRRVQSSPKSYTNRTEQFHKYLKPGALALMRDSQISAKWYRFNSISQIYLRRTSLLESSPLPTTGQSEIDMVDDFPSLVGRVYGPLCLKRKKLAAIKST
        MKR+++ SPK Y +RTEQFHKYLKPGALA MRDSQISAKWYRFNS+SQIYLRRTS L SSPL T GQSEID+VDDFPSL GR YGP CLKRKKLAAIK+T
Subjt:  MKRRVQSSPKSYTNRTEQFHKYLKPGALALMRDSQISAKWYRFNSISQIYLRRTSLLESSPLPTTGQSEIDMVDDFPSLVGRVYGPLCLKRKKLAAIKST

Query:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH
        WFPSPNLQTPTTD+TRDP++DVFNSDVAAH
Subjt:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH

TrEMBL top hits

e value

%identity

Alignment

A0A2P5EE91 Uncharacterized protein

4.2e-23

Show/hide

Query:  MKRRVQSSPKSYTNRTEQFHKYLKPGALALMRDSQISAKWYRFNSISQIYLRRTSLLESSPLPTTGQSEIDMVDDFPSLVGRVYGPLCLKRKKLAAIKST
        M RR ++  +S  +RTE F KYLKPGALA +RDS+ISA+ +R  S++QI   R+S   S P  T GQ  +  +D FP   GRV+GP C +RKKL A K+ 
Subjt:  MKRRVQSSPKSYTNRTEQFHKYLKPGALALMRDSQISAKWYRFNSISQIYLRRTSLLESSPLPTTGQSEIDMVDDFPSLVGRVYGPLCLKRKKLAAIKST

Query:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH
         FPS N  +P  D   DPI+DVF++D+AAH
Subjt:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH

A0A6J1FXV4 uncharacterized protein LOC111448755

6.5e-48

77.69

Show/hide

Query:  MKRRVQSSPKSYTNRTEQFHKYLKPGALALMRDSQISAKWYRFNSISQIYLRRTSLLESSPLPTTGQSEIDMVDDFPSLVGRVYGPLCLKRKKLAAIKST
        M RRVQ S K   NRTEQFHKYLKPGALA +RDS+ISA+ YR+NS+SQIYLRRT+  ESSPL + GQSEID VDDFPSL GRVYGPLCLKRKK + IKST
Subjt:  MKRRVQSSPKSYTNRTEQFHKYLKPGALALMRDSQISAKWYRFNSISQIYLRRTSLLESSPLPTTGQSEIDMVDDFPSLVGRVYGPLCLKRKKLAAIKST

Query:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH
        WFPSPNLQTPT DL+ D IID FNSDVAAH
Subjt:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH

A0A6J1J6X7 uncharacterized protein LOC111484017

3.5e-49

79.23

Show/hide

Query:  MKRRVQSSPKSYTNRTEQFHKYLKPGALALMRDSQISAKWYRFNSISQIYLRRTSLLESSPLPTTGQSEIDMVDDFPSLVGRVYGPLCLKRKKLAAIKST
        M RRVQ S K   NRTEQFHK+LKPGALA MRDS+ISA+ YR+NS+SQI+LRRT+ LESSPL   GQSEID VDDFPSL GRVYGPLCLKRKKLA IK+T
Subjt:  MKRRVQSSPKSYTNRTEQFHKYLKPGALALMRDSQISAKWYRFNSISQIYLRRTSLLESSPLPTTGQSEIDMVDDFPSLVGRVYGPLCLKRKKLAAIKST

Query:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH
        WFPSPNLQTPTTDLT D I+D FNSDVAAH
Subjt:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH

A0A7J6GIE5 Uncharacterized protein

7.2e-23

53.44

Show/hide

Query:  MKRRVQSSPKSYTNRTEQFHKYLKPGALALMRDSQISAKWYRFNSISQIYLRRTSLLESSPLPTTGQSEIDMVDDFPSLVGRVYGPLCLKRKKLAAIKST
        M RR +S  +S  NR E F KYLKPGALA +RDS+ISA+ +RF SI+QI     S   SSP  T GQS +  +D FP   GR++ P C +RKKL A KS 
Subjt:  MKRRVQSSPKSYTNRTEQFHKYLKPGALALMRDSQISAKWYRFNSISQIYLRRTSLLESSPLPTTGQSEIDMVDDFPSLVGRVYGPLCLKRKKLAAIKST

Query:  WFPSPNLQTPTTDLTRDPIIDVF-NSDVAAH
         FPS N  +P  D   DPIIDVF +SD+AAH
Subjt:  WFPSPNLQTPTTDLTRDPIIDVF-NSDVAAH

W9RNW7 Uncharacterized protein

9.5e-23

51.54

Show/hide

Query:  MKRRVQSSPKSYTNRTEQFHKYLKPGALALMRDSQISAKWYRFNSISQIYLRRTSLLESSPLPTTGQSEIDMVDDFPSLVGRVYGPLCLKRKKLAAIKST
        M RR ++  +S  +RTE F KYLKPGALA +RDS+ISA+ +R  ++SQI   R S   S P PT GQ  + ++D FP    R YGP C +RKKL A KS 
Subjt:  MKRRVQSSPKSYTNRTEQFHKYLKPGALALMRDSQISAKWYRFNSISQIYLRRTSLLESSPLPTTGQSEIDMVDDFPSLVGRVYGPLCLKRKKLAAIKST

Query:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH
         FPS    +P  D   DPIIDVF SD+AAH
Subjt:  WFPSPNLQTPTTDLTRDPIIDVFNSDVAAH

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G26960.1 unknown protein

5.0e-08

Show/hide

Query:  KSYTNRTEQFHKYLKPGALALMRDSQISAKWYRFNSISQIYLRRTSLLESSPLPTTGQSEIDMVDDFPSLVGRVYGPLCLKRKKLAAIKSTWF---PSPN
        +S   R + FH+Y+KPGALA +R+++I+     F     +         SS  P     +   +D  P L+ ++YGP  + RKKL   +S      PSPN
Subjt:  KSYTNRTEQFHKYLKPGALALMRDSQISAKWYRFNSISQIYLRRTSLLESSPLPTTGQSEIDMVDDFPSLVGRVYGPLCLKRKKLAAIKSTWF---PSPN

AT5G54970.1 unknown protein

1.8e-10

35.71

Show/hide

Query:  KSYTNRTEQFHKYLKPGALALMRDSQISAK----WYRFNSISQIYLRRTSLLESSPLPTTGQSEIDMVDDFPSLVGRVYGPLCLKRKKLAAIKS-TWFPS
        KS   R++ FH+YLKPGALA +R+S+I+A+        +S+SQ+ +   S  E+S       S    +D  P L+ ++YGP   +RKKLAA +S +    
Subjt:  KSYTNRTEQFHKYLKPGALALMRDSQISAK----WYRFNSISQIYLRRTSLLESSPLPTTGQSEIDMVDDFPSLVGRVYGPLCLKRKKLAAIKS-TWFPS

Query:  PNLQTPTTDLTRDPIIDVFNSDVAAH
         N+  P   +  +P     +SDV AH
Subjt:  PNLQTPTTDLTRDPIIDVFNSDVAAH

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAACGCAGGGTTCAATCCTCGCCCAAATCATATACAAATCGCACGGAACAATTCCACAAGTACTTGAAGCCCGGTGCGTTAGCGCTGATGCGAGACTCTCAAATCAG
CGCCAAATGGTACCGATTCAACTCCATCTCTCAGATCTACCTTCGCCGTACTTCTCTTCTTGAGTCATCTCCACTTCCCACTACCGGTCAATCGGAGATTGACATGGTCG
ATGATTTCCCTTCTTTGGTTGGTAGGGTTTATGGTCCCTTGTGCCTGAAGAGGAAGAAGCTTGCGGCGATTAAGTCTACCTGGTTTCCGAGCCCTAACTTGCAGACTCCA
ACTACCGATTTAACTCGAGACCCGATTATTGATGTGTTTAATAGCGATGTTGCTGCGCATTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MKRRVQSSPKSYTNRTEQFHKYLKPGALALMRDSQISAKWYRFNSISQIYLRRTSLLESSPLPTTGQSEIDMVDDFPSLVGRVYGPLCLKRKKLAAIKSTWFPSPNLQTP
TTDLTRDPIIDVFNSDVAAH

Clc02G08865 (gene) of Watermelon (cordophanus) v2 genome