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Clc02G08990 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G08990
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionAutophagy-related protein
Genome locationClcChr02:11439704..11444199
RNA-Seq ExpressionClc02G08990
SyntenyClc02G08990
Gene Ontology termsGO:0006914 - autophagy (biological process)
GO:0006995 - cellular response to nitrogen starvation (biological process)
GO:0005874 - microtubule (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004241 - Autophagy protein Atg8 ubiquitin-like
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CDP05733.1 unnamed protein product [Coffea canephora]4.5e-5788.64Show/hide
Query:  ELLSLSLIWRLFLSMAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILP
        E L ++LI+R F+ MAKSSFKLEHPLERRQ E+ARIREKYPDRIPVIVE+AEKSD+P+IDKKKYLVPADLTVGQFVYVVRKRIKLS EKAIFIFVKNILP
Subjt:  ELLSLSLIWRLFLSMAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILP

Query:  PTAAMMSAIYEENKDEDGFLYMTYSGENTFGA
        PTAAMMSAIYEENKDEDGFLYMTYSGENTFG+
Subjt:  PTAAMMSAIYEENKDEDGFLYMTYSGENTFGA

KAA0059575.1 Ubiquitin-like superfamily protein [Cucumis melo var. makuwa]1.3e-59100Show/hide
Query:  FLSMAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYE
        FLSMAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYE
Subjt:  FLSMAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYE

Query:  ENKDEDGFLYMTYSGENTFGAC
        ENKDEDGFLYMTYSGENTFGAC
Subjt:  ENKDEDGFLYMTYSGENTFGAC

KAG6570885.1 NEDD8-activating enzyme E1 regulatory subunit AXR1, partial [Cucurbita argyrosperma subsp. sororia]1.3e-5985.81Show/hide
Query:  GEYTLQEFDDYLK-KELLSLSLIWRLFLSMAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKL
        GE   +E  D  + + + S+S      LSMAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKL
Subjt:  GEYTLQEFDDYLK-KELLSLSLIWRLFLSMAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKL

Query:  SPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC
        SPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC
Subjt:  SPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC

XP_004151892.1 autophagy-related protein 8C-like [Cucumis sativus]4.1e-58100Show/hide
Query:  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK
        MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK
Subjt:  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK

Query:  DEDGFLYMTYSGENTFGAC
        DEDGFLYMTYSGENTFGAC
Subjt:  DEDGFLYMTYSGENTFGAC

XP_023512507.1 autophagy-related protein 8c [Cucurbita pepo subsp. pepo]1.5e-5799.16Show/hide
Query:  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK
        MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK
Subjt:  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK

Query:  DEDGFLYMTYSGENTFGAC
        DEDGFLYMTYSGENTFG C
Subjt:  DEDGFLYMTYSGENTFGAC

TrEMBL top hitse value%identityAlignment
A0A0A0LN58 Autophagy-related protein2.0e-58100Show/hide
Query:  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK
        MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK
Subjt:  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK

Query:  DEDGFLYMTYSGENTFGAC
        DEDGFLYMTYSGENTFGAC
Subjt:  DEDGFLYMTYSGENTFGAC

A0A1S3C2M9 Autophagy-related protein2.0e-58100Show/hide
Query:  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK
        MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK
Subjt:  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK

Query:  DEDGFLYMTYSGENTFGAC
        DEDGFLYMTYSGENTFGAC
Subjt:  DEDGFLYMTYSGENTFGAC

A0A5A7V165 Autophagy-related protein6.1e-60100Show/hide
Query:  FLSMAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYE
        FLSMAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYE
Subjt:  FLSMAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYE

Query:  ENKDEDGFLYMTYSGENTFGAC
        ENKDEDGFLYMTYSGENTFGAC
Subjt:  ENKDEDGFLYMTYSGENTFGAC

A0A6J1FV37 Autophagy-related protein2.0e-58100Show/hide
Query:  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK
        MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK
Subjt:  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK

Query:  DEDGFLYMTYSGENTFGAC
        DEDGFLYMTYSGENTFGAC
Subjt:  DEDGFLYMTYSGENTFGAC

A0A6J1JFZ0 Autophagy-related protein2.0e-58100Show/hide
Query:  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK
        MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK
Subjt:  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK

Query:  DEDGFLYMTYSGENTFGAC
        DEDGFLYMTYSGENTFGAC
Subjt:  DEDGFLYMTYSGENTFGAC

SwissProt top hitse value%identityAlignment
A2YS06 Autophagy-related protein 8C1.7e-5490.6Show/hide
Query:  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK
        MA+SSFKLEHPLERRQ E+ RIREKYPDRIPVIVE+AE+SD+P+IDKKKYLVPADLTVGQFVYVVRKRIKLS EKAIFIFVKN LPPTAA+MSAIYEENK
Subjt:  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK

Query:  DEDGFLYMTYSGENTFG
        DEDGFLYMTYSGENTFG
Subjt:  DEDGFLYMTYSGENTFG

M1C146 Autophagy-related protein 8C-like5.2e-5692.37Show/hide
Query:  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK
        MAKSSFKLEHPLERRQ E+ARIREKYPDRIPVIVE+AE+SD+P+IDKKKYLVPADLTVGQFVYVVRKRIKLS EKAIFIFVKNILPPTAAMMSAIYEE+K
Subjt:  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK

Query:  DEDGFLYMTYSGENTFGA
        DEDGFLYMTYSGENTFG+
Subjt:  DEDGFLYMTYSGENTFGA

Q2XPP5 Autophagy-related protein 8A5.7e-5589.83Show/hide
Query:  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK
        MA++SFKLEHPLERRQ ESARIREKY DRIPVIVE+A+K+DVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIF+FVKN LPPTA++MSAIYEENK
Subjt:  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK

Query:  DEDGFLYMTYSGENTFGA
        DEDGFLYMTYSGENTFG+
Subjt:  DEDGFLYMTYSGENTFGA

Q69RC4 Autophagy-related protein 8A5.7e-5589.83Show/hide
Query:  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK
        MA++SFKLEHPLERRQ ESARIREKY DRIPVIVE+A+K+DVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIF+FVKN LPPTA++MSAIYEENK
Subjt:  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK

Query:  DEDGFLYMTYSGENTFGA
        DEDGFLYMTYSGENTFG+
Subjt:  DEDGFLYMTYSGENTFGA

Q8S927 Autophagy-related protein 8c2.0e-5592.31Show/hide
Query:  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK
        MA SSFKLEHPLERRQ+ES+RIREKYPDRIPVIVERAE+SDVP IDKKKYLVPADLTVGQFVYVVRKRIKLS EKAIF+FVKN LPPTAAMMSAIY+ENK
Subjt:  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK

Query:  DEDGFLYMTYSGENTFG
        DEDGFLYMTYSGENTFG
Subjt:  DEDGFLYMTYSGENTFG

Arabidopsis top hitse value%identityAlignment
AT1G62040.1 Ubiquitin-like superfamily protein1.4e-5692.31Show/hide
Query:  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK
        MA SSFKLEHPLERRQ+ES+RIREKYPDRIPVIVERAE+SDVP IDKKKYLVPADLTVGQFVYVVRKRIKLS EKAIF+FVKN LPPTAAMMSAIY+ENK
Subjt:  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK

Query:  DEDGFLYMTYSGENTFG
        DEDGFLYMTYSGENTFG
Subjt:  DEDGFLYMTYSGENTFG

AT1G62040.2 Ubiquitin-like superfamily protein8.2e-5790.76Show/hide
Query:  LSMAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEE
        ++MA SSFKLEHPLERRQ+ES+RIREKYPDRIPVIVERAE+SDVP IDKKKYLVPADLTVGQFVYVVRKRIKLS EKAIF+FVKN LPPTAAMMSAIY+E
Subjt:  LSMAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEE

Query:  NKDEDGFLYMTYSGENTFG
        NKDEDGFLYMTYSGENTFG
Subjt:  NKDEDGFLYMTYSGENTFG

AT2G05630.1 Ubiquitin-like superfamily protein2.0e-5591.45Show/hide
Query:  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK
        MA SSFK EHPLE+RQ E+ARIREKYPDRIPVIVERAEKSDVP+ID+KKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAA+MSAIYEE+K
Subjt:  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK

Query:  DEDGFLYMTYSGENTFG
        DEDGFLYM+YSGENTFG
Subjt:  DEDGFLYMTYSGENTFG

AT4G21980.1 Ubiquitin-like superfamily protein1.0e-5184.75Show/hide
Query:  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK
        MAKSSFK+ +PLE R  ES+RIREKYPDRIPVIVE+A +SDVP+IDKKKYLVPADLTVGQFVYVVRKRIKL  EKAIF+FVKN LPPTAA+MSAIYEE+K
Subjt:  MAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENK

Query:  DEDGFLYMTYSGENTFGA
        DEDGFLYMTYSGENTFG+
Subjt:  DEDGFLYMTYSGENTFGA

AT4G21980.2 Ubiquitin-like superfamily protein4.6e-5283.33Show/hide
Query:  LSMAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEE
        ++MAKSSFK+ +PLE R  ES+RIREKYPDRIPVIVE+A +SDVP+IDKKKYLVPADLTVGQFVYVVRKRIKL  EKAIF+FVKN LPPTAA+MSAIYEE
Subjt:  LSMAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEE

Query:  NKDEDGFLYMTYSGENTFGA
        +KDEDGFLYMTYSGENTFG+
Subjt:  NKDEDGFLYMTYSGENTFGA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGTACTGAGCGAATCGACTACACAGAACAATCAAGCCCGAATTCCCCTGGGGTGGAAAATGAACTCAATCAAAGAAAAAGATGCCTGAGGACTGACAATGGTGG
AGAATACACGTTGCAAGAGTTTGATGATTATTTGAAGAAAGAGCTTCTCTCGCTGTCTTTGATTTGGAGGCTTTTTCTTTCGATGGCAAAAAGCTCGTTTAAGTTGGAGC
ATCCCCTGGAACGAAGGCAGGTTGAATCTGCTAGGATCCGAGAGAAGTATCCTGACAGAATTCCGGTGATCGTGGAAAGGGCTGAAAAGAGCGATGTGCCAGAAATTGAT
AAGAAAAAATATTTAGTTCCTGCTGATTTAACTGTTGGTCAGTTTGTGTACGTGGTCCGAAAGAGGATCAAGCTCAGCCCTGAGAAGGCCATCTTCATATTTGTGAAGAA
TATTCTGCCCCCTACCGCTGCTATGATGTCTGCAATTTATGAGGAAAACAAGGATGAAGATGGTTTCCTTTATATGACCTACAGCGGAGAAAACACGTTTGGAGCGTGCT
GA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGTACTGAGCGAATCGACTACACAGAACAATCAAGCCCGAATTCCCCTGGGGTGGAAAATGAACTCAATCAAAGAAAAAGATGCCTGAGGACTGACAATGGTGG
AGAATACACGTTGCAAGAGTTTGATGATTATTTGAAGAAAGAGCTTCTCTCGCTGTCTTTGATTTGGAGGCTTTTTCTTTCGATGGCAAAAAGCTCGTTTAAGTTGGAGC
ATCCCCTGGAACGAAGGCAGGTTGAATCTGCTAGGATCCGAGAGAAGTATCCTGACAGAATTCCGGTGATCGTGGAAAGGGCTGAAAAGAGCGATGTGCCAGAAATTGAT
AAGAAAAAATATTTAGTTCCTGCTGATTTAACTGTTGGTCAGTTTGTGTACGTGGTCCGAAAGAGGATCAAGCTCAGCCCTGAGAAGGCCATCTTCATATTTGTGAAGAA
TATTCTGCCCCCTACCGCTGCTATGATGTCTGCAATTTATGAGGAAAACAAGGATGAAGATGGTTTCCTTTATATGACCTACAGCGGAGAAAACACGTTTGGAGCGTGCT
GA
Protein sequenceShow/hide protein sequence
MEGTERIDYTEQSSPNSPGVENELNQRKRCLRTDNGGEYTLQEFDDYLKKELLSLSLIWRLFLSMAKSSFKLEHPLERRQVESARIREKYPDRIPVIVERAEKSDVPEID
KKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC