; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G09170 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G09170
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionDBD_Tnp_Mut domain-containing protein
Genome locationClcChr02:11949202..11950235
RNA-Seq ExpressionClc02G09170
SyntenyClc02G09170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK14498.1 MuDR family transposase [Cucumis melo var. makuwa]5.3e-1741.33Show/hide
Query:  IPIVLFHSGIWNEKHCYVIYKSTGVLVDDTKHHTR--------------------HPLVVHVTSSCLEVS---SNIVSSGAENYLPIVSSFTPVIDDGDF
        +PIV+FHSG W++ + Y+ YK+T VLVD+                          HPLV H  +    +    S++V SG +N   ++ S +  IDD DF
Subjt:  IPIVLFHSGIWNEKHCYVIYKSTGVLVDDTKHHTR--------------------HPLVVHVTSSCLEVS---SNIVSSGAENYLPIVSSFTPVIDDGDF

Query:  QVIMDIHIA-----HDLKEKDVFASKEILSNCFNSIAIKKNFEFKTVRSN
        Q++ D+H++      D KEKD+FASKE+LS  F  IAIK NFEFKTVRSN
Subjt:  QVIMDIHIA-----HDLKEKDVFASKEILSNCFNSIAIKKNFEFKTVRSN

TYK14543.1 uncharacterized protein E5676_scaffold552G00250 [Cucumis melo var. makuwa]4.3e-1946.67Show/hide
Query:  IPIVLFHSGIWNEKHCYVIYKSTGVLVDDTK-------------------HHTRHPLV----VHVTSSCLEVSSNIVSSGAENYLPIVSSFTPVIDDGDF
        +PIV+FHSG W++ + Y+ YK+TGVLVD+                       TRHPLV     HV++  LE SS +V S  +N   ++ S +  IDD DF
Subjt:  IPIVLFHSGIWNEKHCYVIYKSTGVLVDDTK-------------------HHTRHPLV----VHVTSSCLEVSSNIVSSGAENYLPIVSSFTPVIDDGDF

Query:  QVIMDIHIA-----HDLKEKDVFASKEILSNCFNSIAIKKNFEFKTVRSN
        Q++ DIH++      DLKEKD+FASKE+LS  F  IAIK NFEFKTVRSN
Subjt:  QVIMDIHIA-----HDLKEKDVFASKEILSNCFNSIAIKKNFEFKTVRSN

TYK23827.1 MuDR family transposase [Cucumis melo var. makuwa]6.9e-1739.04Show/hide
Query:  IPIVLFHSGIWNEKHCYVIYKSTGVLVDDTKHH--------------------------------------------------------TRHPLV----V
        +PIV+FHSG W++ + Y+ YK+TGVLVD+                                                            TRHPLV    V
Subjt:  IPIVLFHSGIWNEKHCYVIYKSTGVLVDDTKHH--------------------------------------------------------TRHPLV----V

Query:  HVTSSCLEVSSNIVSSGAENYLPIVSSFTPVIDDGDFQVIMDIHIA-----HDLKEKDVFASKEILSNCFNSIAIKKNFEFKTVRSN
        HV++  LE SS +V SG +N   ++SS +  IDD DFQ++ DIH++      DLKEKD+FASKE+LS  F  IAIK NFEFKTVRSN
Subjt:  HVTSSCLEVSSNIVSSGAENYLPIVSSFTPVIDDGDFQVIMDIHIA-----HDLKEKDVFASKEILSNCFNSIAIKKNFEFKTVRSN

XP_038891569.1 uncharacterized protein LOC120080959 [Benincasa hispida]1.1e-3077.17Show/hide
Query:  KHHTRHPLVVHVTSSCLEVSSNIVSSGAENYLPIVSSFTPVIDDGDFQVIMDIHIAHDLKEKDVFASKEILSNCFNSIAIKKNFEFKTVRSN
        +H+ RHPLV H +SSCLE SSN+VSSGAENYL  V S  P+IDDGDFQVIMDIHI  DLKEKDVFASKEILSNCF  IA+KKNFEFKT+ SN
Subjt:  KHHTRHPLVVHVTSSCLEVSSNIVSSGAENYLPIVSSFTPVIDDGDFQVIMDIHIAHDLKEKDVFASKEILSNCFNSIAIKKNFEFKTVRSN

XP_038907134.1 uncharacterized protein LOC120092945 [Benincasa hispida]5.2e-3352.22Show/hide
Query:  MVIPIVLFHSGIWNEKHCYVIYKSTGVLVDD--------------------------------------------------------TKHHTRHPLVVHV
        MVIPIV+FH GIWNEK  YV YK+ GVLVDD                                                         +  TRHPLV HV
Subjt:  MVIPIVLFHSGIWNEKHCYVIYKSTGVLVDD--------------------------------------------------------TKHHTRHPLVVHV

Query:  TSSCLEVSSNIVSSGAENYLPIVSSFTPVIDDGDFQVIMDIHIAHDLKEKDVFASKEILSNCFNSIAIKKNFEFKTVRSN
        TS CLE SS++VSS AENYL IV    P+IDD DFQVIMDIHIA DLKEKDVFASKEILS CF  IA+KKNFEFKT+RSN
Subjt:  TSSCLEVSSNIVSSGAENYLPIVSSFTPVIDDGDFQVIMDIHIAHDLKEKDVFASKEILSNCFNSIAIKKNFEFKTVRSN

TrEMBL top hitse value%identityAlignment
A0A5A7VEB2 DBD_Tnp_Mut domain-containing protein2.2e-1637.97Show/hide
Query:  IPIVLFHSGIWNEKHCYVIYKSTGVLVDDTK--------------------------------------------------------HHTRHPLV----V
        +PIV+FHSG W++ + Y+ YK+TGVLVD+                                                          H TRHPLV     
Subjt:  IPIVLFHSGIWNEKHCYVIYKSTGVLVDDTK--------------------------------------------------------HHTRHPLV----V

Query:  HVTSSCLEVSSNIVSSGAENYLPIVSSFTPVIDDGDFQVIMDIHIA-----HDLKEKDVFASKEILSNCFNSIAIKKNFEFKTVRSN
        HV++  LE SS +V SG +N   ++ S +  IDD DFQ++ DIH++      DLKE D+FASKE+LS  F  IAIK NFEFKTVRSN
Subjt:  HVTSSCLEVSSNIVSSGAENYLPIVSSFTPVIDDGDFQVIMDIHIA-----HDLKEKDVFASKEILSNCFNSIAIKKNFEFKTVRSN

A0A5D3CRP1 SWIM-type domain-containing protein2.1e-1946.67Show/hide
Query:  IPIVLFHSGIWNEKHCYVIYKSTGVLVDDTK-------------------HHTRHPLV----VHVTSSCLEVSSNIVSSGAENYLPIVSSFTPVIDDGDF
        +PIV+FHSG W++ + Y+ YK+TGVLVD+                       TRHPLV     HV++  LE SS +V S  +N   ++ S +  IDD DF
Subjt:  IPIVLFHSGIWNEKHCYVIYKSTGVLVDDTK-------------------HHTRHPLV----VHVTSSCLEVSSNIVSSGAENYLPIVSSFTPVIDDGDF

Query:  QVIMDIHIA-----HDLKEKDVFASKEILSNCFNSIAIKKNFEFKTVRSN
        Q++ DIH++      DLKEKD+FASKE+LS  F  IAIK NFEFKTVRSN
Subjt:  QVIMDIHIA-----HDLKEKDVFASKEILSNCFNSIAIKKNFEFKTVRSN

A0A5D3CTF9 MuDR family transposase2.5e-1741.33Show/hide
Query:  IPIVLFHSGIWNEKHCYVIYKSTGVLVDDTKHHTR--------------------HPLVVHVTSSCLEVS---SNIVSSGAENYLPIVSSFTPVIDDGDF
        +PIV+FHSG W++ + Y+ YK+T VLVD+                          HPLV H  +    +    S++V SG +N   ++ S +  IDD DF
Subjt:  IPIVLFHSGIWNEKHCYVIYKSTGVLVDDTKHHTR--------------------HPLVVHVTSSCLEVS---SNIVSSGAENYLPIVSSFTPVIDDGDF

Query:  QVIMDIHIA-----HDLKEKDVFASKEILSNCFNSIAIKKNFEFKTVRSN
        Q++ D+H++      D KEKD+FASKE+LS  F  IAIK NFEFKTVRSN
Subjt:  QVIMDIHIA-----HDLKEKDVFASKEILSNCFNSIAIKKNFEFKTVRSN

A0A5D3DJR8 MuDR family transposase3.3e-1739.04Show/hide
Query:  IPIVLFHSGIWNEKHCYVIYKSTGVLVDDTKHH--------------------------------------------------------TRHPLV----V
        +PIV+FHSG W++ + Y+ YK+TGVLVD+                                                            TRHPLV    V
Subjt:  IPIVLFHSGIWNEKHCYVIYKSTGVLVDDTKHH--------------------------------------------------------TRHPLV----V

Query:  HVTSSCLEVSSNIVSSGAENYLPIVSSFTPVIDDGDFQVIMDIHIA-----HDLKEKDVFASKEILSNCFNSIAIKKNFEFKTVRSN
        HV++  LE SS +V SG +N   ++SS +  IDD DFQ++ DIH++      DLKEKD+FASKE+LS  F  IAIK NFEFKTVRSN
Subjt:  HVTSSCLEVSSNIVSSGAENYLPIVSSFTPVIDDGDFQVIMDIHIA-----HDLKEKDVFASKEILSNCFNSIAIKKNFEFKTVRSN

A0A5D3DWG1 Mutator-like transposase2.8e-1637.97Show/hide
Query:  IPIVLFHSGIWNEKHCYVIYKSTGVLVDDTK--------------------------------------------------------HHTRHPLV----V
        +PIV+FHSG W++ + Y+ YK+ GVLVD+                                                          H TRHPLV     
Subjt:  IPIVLFHSGIWNEKHCYVIYKSTGVLVDDTK--------------------------------------------------------HHTRHPLV----V

Query:  HVTSSCLEVSSNIVSSGAENYLPIVSSFTPVIDDGDFQVIMDIHIA-----HDLKEKDVFASKEILSNCFNSIAIKKNFEFKTVRSN
        HV++  LE SS +V SG +N   ++ S +  IDD DFQ++ DIH++      DLKEKD+FASKE+LS  F  IAIK NFEFKTVRSN
Subjt:  HVTSSCLEVSSNIVSSGAENYLPIVSSFTPVIDDGDFQVIMDIHIA-----HDLKEKDVFASKEILSNCFNSIAIKKNFEFKTVRSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTATTCCAATAGTTCTTTTTCATAGTGGAATATGGAATGAAAAACATTGTTATGTGATTTACAAATCTACTGGAGTTTTAGTAGATGATACAAAACACCATACAAG
ACATCCTTTGGTTGTTCATGTCACTAGTTCGTGTTTGGAAGTGTCTTCTAATATTGTTTCTAGTGGAGCTGAGAATTATTTGCCTATTGTTTCTTCTTTTACACCTGTGA
TTGATGATGGTGATTTCCAAGTGATTATGGATATACATATTGCTCATGATTTGAAAGAAAAGGATGTGTTTGCTAGTAAAGAGATTTTATCAAATTGTTTTAACTCGATA
GCAATTAAGAAGAATTTTGAATTTAAGACTGTAAGATCAAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTATTCCAATAGTTCTTTTTCATAGTGGAATATGGAATGAAAAACATTGTTATGTGATTTACAAATCTACTGGAGTTTTAGTAGATGATACAAAACACCATACAAG
ACATCCTTTGGTTGTTCATGTCACTAGTTCGTGTTTGGAAGTGTCTTCTAATATTGTTTCTAGTGGAGCTGAGAATTATTTGCCTATTGTTTCTTCTTTTACACCTGTGA
TTGATGATGGTGATTTCCAAGTGATTATGGATATACATATTGCTCATGATTTGAAAGAAAAGGATGTGTTTGCTAGTAAAGAGATTTTATCAAATTGTTTTAACTCGATA
GCAATTAAGAAGAATTTTGAATTTAAGACTGTAAGATCAAACTAAAAATCAATTGTGTTTCAATGTGTTCAAGATGGTTGTCAATGGTATGTGAGGGCATCCCGTTATAA
GCATGGTGTTTGGTGGATGCTTAGGAAGTTCATTGATATTCATGATTGTTCTATAAAAAGTGTTCAGAGTTGTCATAGGCAAATTTCTTCGTCCTTAATAGCTGAATGTT
TGAAAATTGATTTTAGATTTAGTTCTTCTCATACCTCAACTCTATTATATATAAAGTCCGTAAGAAATTTGGAGTAAATGTTAGTTGTTATAAAGCATGGAGGGCAAAAG
AGCACATAATGAAGTCTTTGAAAACCGATGCACGTGAATCATATGCTTTGATTCCAAAGTTTCTTATGAAGTTGGAAGAAAGAAATTCAGGTACATTCACGGCCTATGAA
ACTGACATAAATGGGCATTTTAAGCATTGTTATATGGTTA
Protein sequenceShow/hide protein sequence
MVIPIVLFHSGIWNEKHCYVIYKSTGVLVDDTKHHTRHPLVVHVTSSCLEVSSNIVSSGAENYLPIVSSFTPVIDDGDFQVIMDIHIAHDLKEKDVFASKEILSNCFNSI
AIKKNFEFKTVRSN