; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G09490 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G09490
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProtochlorophyllide reductase
Genome locationClcChr02:13370392..13371290
RNA-Seq ExpressionClc02G09490
SyntenyClc02G09490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053319.1 uncharacterized protein E6C27_scaffold102G001420 [Cucumis melo var. makuwa]1.1e-4283.18Show/hide
Query:  MWRLISALRPTLHNFTNSHRVADESMFTTTDQFPIYAAADHHHRRPFSAAIFSIIRAPFSILSCFAPPPVHRSADAFWLSGDHYFASTISETNQLMVSDG
        MWR+ + +RPTLHNFTNSHR+ADESMFTTTDQFP YAAA  ++RR FS AIF+IIRAPFSILSCFAPP VHRS DAFWLSGDHYFASTISE N LMVSDG
Subjt:  MWRLISALRPTLHNFTNSHRVADESMFTTTDQFPIYAAADHHHRRPFSAAIFSIIRAPFSILSCFAPPPVHRSADAFWLSGDHYFASTISETNQLMVSDG

Query:  MRYAILM
        MRYAILM
Subjt:  MRYAILM
XP_008455967.1 PREDICTED: uncharacterized protein LOC103496030 [Cucumis melo]2.4e-4282.24Show/hide
Query:  MWRLISALRPTLHNFTNSHRVADESMFTTTDQFPIYAAADHHHRRPFSAAIFSIIRAPFSILSCFAPPPVHRSADAFWLSGDHYFASTISETNQLMVSDG
        MWR+ + +RPTLHNFTN+HR+ADESMFTTTDQFP YAAA  ++RR FS AIF+IIRAPFSILSCFAPP VHRS DAFWLSGDHYFASTISE N LMVSDG
Subjt:  MWRLISALRPTLHNFTNSHRVADESMFTTTDQFPIYAAADHHHRRPFSAAIFSIIRAPFSILSCFAPPPVHRSADAFWLSGDHYFASTISETNQLMVSDG

Query:  MRYAILM
        MRYAILM
Subjt:  MRYAILM
XP_022944204.1 uncharacterized protein LOC111448722 [Cucurbita moschata]2.8e-4383.93Show/hide
Query:  MWRLISALRPTLHNFTNSHRVADESMFTTTDQFPIYAAADHHH-RRPFS----AAIFSIIRAPFSILSCFAPPPVHRSADAFWLSGDHYFASTISETNQL
        MWRLI+ALRPTLHNFTNSHRVADESMFTTT +FPIYA A+HHH RRP +    AA+FSIIRAPFSILSCFAPPPVH SAD FWLS DHYFASTISETN L
Subjt:  MWRLISALRPTLHNFTNSHRVADESMFTTTDQFPIYAAADHHH-RRPFS----AAIFSIIRAPFSILSCFAPPPVHRSADAFWLSGDHYFASTISETNQL

Query:  MVSDGMRYAILM
        MVSDGMRYA+LM
Subjt:  MVSDGMRYAILM
XP_022985817.1 uncharacterized protein LOC111483748 [Cucurbita maxima]6.3e-4383.04Show/hide
Query:  MWRLISALRPTLHNFTNSHRVADESMFTTTDQFPIYAAAD-HHHRRPFS----AAIFSIIRAPFSILSCFAPPPVHRSADAFWLSGDHYFASTISETNQL
        MWRLI+ALRPTLHNFTNSHRVADESMFTTT +FPIYA A+ HHHRRP +    +A+FSIIRAPFSILSCFAPPPVH SAD FWLS DHYFASTISETN L
Subjt:  MWRLISALRPTLHNFTNSHRVADESMFTTTDQFPIYAAAD-HHHRRPFS----AAIFSIIRAPFSILSCFAPPPVHRSADAFWLSGDHYFASTISETNQL

Query:  MVSDGMRYAILM
        MVSDGMRYA+LM
Subjt:  MVSDGMRYAILM
XP_023513038.1 uncharacterized protein LOC111777603 [Cucurbita pepo subsp. pepo]8.2e-4382.3Show/hide
Query:  MWRLISALRPTLHNFTNSHRVADESMFTTTDQFPIYAAADHHH--RRPFS----AAIFSIIRAPFSILSCFAPPPVHRSADAFWLSGDHYFASTISETNQ
        MWRLI+ALRPTLHNFTNSHRVADESMFTTT +FPIYA A+HHH  RRP +    +A+FSIIRAPFSILSCFAPPPVH SAD FWLS DHYFASTISETN 
Subjt:  MWRLISALRPTLHNFTNSHRVADESMFTTTDQFPIYAAADHHH--RRPFS----AAIFSIIRAPFSILSCFAPPPVHRSADAFWLSGDHYFASTISETNQ

Query:  LMVSDGMRYAILM
        LMVSDGMRYA+LM
Subjt:  LMVSDGMRYAILM
TrEMBL top hitse value%identityAlignment
A0A1S3C290 uncharacterized protein LOC1034960301.2e-4282.24Show/hide
Query:  MWRLISALRPTLHNFTNSHRVADESMFTTTDQFPIYAAADHHHRRPFSAAIFSIIRAPFSILSCFAPPPVHRSADAFWLSGDHYFASTISETNQLMVSDG
        MWR+ + +RPTLHNFTN+HR+ADESMFTTTDQFP YAAA  ++RR FS AIF+IIRAPFSILSCFAPP VHRS DAFWLSGDHYFASTISE N LMVSDG
Subjt:  MWRLISALRPTLHNFTNSHRVADESMFTTTDQFPIYAAADHHHRRPFSAAIFSIIRAPFSILSCFAPPPVHRSADAFWLSGDHYFASTISETNQLMVSDG

Query:  MRYAILM
        MRYAILM
Subjt:  MRYAILM
A0A5A7UIL8 Uncharacterized protein5.2e-4383.18Show/hide
Query:  MWRLISALRPTLHNFTNSHRVADESMFTTTDQFPIYAAADHHHRRPFSAAIFSIIRAPFSILSCFAPPPVHRSADAFWLSGDHYFASTISETNQLMVSDG
        MWR+ + +RPTLHNFTNSHR+ADESMFTTTDQFP YAAA  ++RR FS AIF+IIRAPFSILSCFAPP VHRS DAFWLSGDHYFASTISE N LMVSDG
Subjt:  MWRLISALRPTLHNFTNSHRVADESMFTTTDQFPIYAAADHHHRRPFSAAIFSIIRAPFSILSCFAPPPVHRSADAFWLSGDHYFASTISETNQLMVSDG

Query:  MRYAILM
        MRYAILM
Subjt:  MRYAILM
A0A5D3CJA9 Uncharacterized protein1.2e-4282.24Show/hide
Query:  MWRLISALRPTLHNFTNSHRVADESMFTTTDQFPIYAAADHHHRRPFSAAIFSIIRAPFSILSCFAPPPVHRSADAFWLSGDHYFASTISETNQLMVSDG
        MWR+ + +RPTLHNFTN+HR+ADESMFTTTDQFP YAAA  ++RR FS AIF+IIRAPFSILSCFAPP VHRS DAFWLSGDHYFASTISE N LMVSDG
Subjt:  MWRLISALRPTLHNFTNSHRVADESMFTTTDQFPIYAAADHHHRRPFSAAIFSIIRAPFSILSCFAPPPVHRSADAFWLSGDHYFASTISETNQLMVSDG

Query:  MRYAILM
        MRYAILM
Subjt:  MRYAILM
A0A6J1FWB0 uncharacterized protein LOC1114487221.4e-4383.93Show/hide
Query:  MWRLISALRPTLHNFTNSHRVADESMFTTTDQFPIYAAADHHH-RRPFS----AAIFSIIRAPFSILSCFAPPPVHRSADAFWLSGDHYFASTISETNQL
        MWRLI+ALRPTLHNFTNSHRVADESMFTTT +FPIYA A+HHH RRP +    AA+FSIIRAPFSILSCFAPPPVH SAD FWLS DHYFASTISETN L
Subjt:  MWRLISALRPTLHNFTNSHRVADESMFTTTDQFPIYAAADHHH-RRPFS----AAIFSIIRAPFSILSCFAPPPVHRSADAFWLSGDHYFASTISETNQL

Query:  MVSDGMRYAILM
        MVSDGMRYA+LM
Subjt:  MVSDGMRYAILM
A0A6J1J5Y3 uncharacterized protein LOC1114837483.0e-4383.04Show/hide
Query:  MWRLISALRPTLHNFTNSHRVADESMFTTTDQFPIYAAAD-HHHRRPFS----AAIFSIIRAPFSILSCFAPPPVHRSADAFWLSGDHYFASTISETNQL
        MWRLI+ALRPTLHNFTNSHRVADESMFTTT +FPIYA A+ HHHRRP +    +A+FSIIRAPFSILSCFAPPPVH SAD FWLS DHYFASTISETN L
Subjt:  MWRLISALRPTLHNFTNSHRVADESMFTTTDQFPIYAAAD-HHHRRPFS----AAIFSIIRAPFSILSCFAPPPVHRSADAFWLSGDHYFASTISETNQL

Query:  MVSDGMRYAILM
        MVSDGMRYA+LM
Subjt:  MVSDGMRYAILM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G04795.1 unknown protein7.2e-1342.99Show/hide
Query:  MWRLISALRPTLHNFTNSHRVADESMFTTTDQFPIYAAADHHHRRPFSAAIFSIIRAPFSILSCFAPPPVHRSADAFWLSGDHYFASTISETNQLMVSDG
        M +++S LR  L N   S RVADES   +T         DH      +     I++ P SI+SCF+ P V R AD  W+SGD+     +SE N LMV DG
Subjt:  MWRLISALRPTLHNFTNSHRVADESMFTTTDQFPIYAAADHHHRRPFSAAIFSIIRAPFSILSCFAPPPVHRSADAFWLSGDHYFASTISETNQLMVSDG

Query:  MRYAILM
        MRYA+LM
Subjt:  MRYAILM
AT5G35732.1 unknown protein2.5e-1342.99Show/hide
Query:  MWRLISALRPTLHNFTNSHRVADESMFTTTDQFPIYAAADHHHRRPFSAAIFSIIRAPFSILSCFAPPPVHRSADAFWLSGDHYFASTISETNQLMVSDG
        M +++S LR  L N   S RVAD++   ++          +  R  F++    I+R PFSI+SCFA P V    D  W+SGD+    +ISE N LMVSD 
Subjt:  MWRLISALRPTLHNFTNSHRVADESMFTTTDQFPIYAAADHHHRRPFSAAIFSIIRAPFSILSCFAPPPVHRSADAFWLSGDHYFASTISETNQLMVSDG

Query:  MRYAILM
        MRYAILM
Subjt:  MRYAILM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCGGCTGATTTCAGCTCTTCGCCCCACCCTCCACAACTTCACTAACAGCCACCGCGTCGCTGACGAGAGCATGTTCACTACAACTGATCAATTCCCCATCTACGC
CGCCGCCGACCACCACCACCGCCGCCCCTTCTCCGCCGCCATCTTCAGCATCATTCGTGCTCCTTTCTCTATTCTCTCCTGCTTCGCGCCACCCCCGGTTCACCGCTCCG
CCGACGCCTTCTGGCTCTCCGGCGACCACTATTTTGCCTCTACTATTTCCGAGACCAACCAGCTTATGGTAAGCGACGGCATGCGTTACGCCATATTGATGTAG
mRNA sequenceShow/hide mRNA sequence
GGGAGGCTAGACACACACTAGCCAAGTAGCAATAGCAAAAACTCCAATAGGACCACACACACACACACAAACACACACACGCCAAAAGAAAAACCACCAACTTGACAATA
TTTTTTTCCCATTATTTAAATTAAAAATAAAATAAAATAACTCCCTCCCATCTTCTCGCTTCTCTTCACTTTCTTCTTCACATTAAGTGTCTCCCACTCCAAAATTTTTT
TTTTTTTTTAAAAAAAGAAAAAAAACCCATTAATTTAATCCTCCATTTTCTCTCTTCCCTCCTTTGATCTCCCAACCAAAACACACACACACACATACACATCATCATGT
GGCGGCTGATTTCAGCTCTTCGCCCCACCCTCCACAACTTCACTAACAGCCACCGCGTCGCTGACGAGAGCATGTTCACTACAACTGATCAATTCCCCATCTACGCCGCC
GCCGACCACCACCACCGCCGCCCCTTCTCCGCCGCCATCTTCAGCATCATTCGTGCTCCTTTCTCTATTCTCTCCTGCTTCGCGCCACCCCCGGTTCACCGCTCCGCCGA
CGCCTTCTGGCTCTCCGGCGACCACTATTTTGCCTCTACTATTTCCGAGACCAACCAGCTTATGGTAAGCGACGGCATGCGTTACGCCATATTGATGTAGGAAGCTAACA
CTCGAAGCATAAAAAAAGAAAAATTGGAACTACTTTAGCTTTTATTTCTGTTGTAGTTGAGAAATAATCACTTTTTTCTTTCTTTCTTTCTTTTTGGTTTATTGGATTTA
GTGTCTTTCTAATTTGTTCTTGTATTATTTTTTCACACGACCCTCATCCCAATCCCAATTCCATGATCATTAAATTAATTTTTTTTTTAAAAAAAAACTCAAAATATAAT
TTTGCATGTTATACTTTCA
Protein sequenceShow/hide protein sequence
MWRLISALRPTLHNFTNSHRVADESMFTTTDQFPIYAAADHHHRRPFSAAIFSIIRAPFSILSCFAPPPVHRSADAFWLSGDHYFASTISETNQLMVSDGMRYAILM