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Clc02G09500 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G09500
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionTransposase
Genome locationClcChr02:13379424..13381523
RNA-Seq ExpressionClc02G09500
SyntenyClc02G09500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039484.1 putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]9.4e-5142.36Show/hide
Query:  GPIIIFNVTHVRSAGERKLVEYNDNGVPIGENGAKLNSFIGSCAHYHIPITYATWKRVCAKLKDKIYNIVEDEISRTNDPLG----------NKQLS---
        GP  +F+VT +RS G++K+V YN++G PIGENGAKL SFIGS  HYH+PITY +WK V A+LKDKI+  VE E S   D +           NKQ     
Subjt:  GPIIIFNVTHVRSAGERKLVEYNDNGVPIGENGAKLNSFIGSCAHYHIPITYATWKRVCAKLKDKIYNIVEDEISRTNDPLG----------NKQLS---

Query:  ------------------------PNDVLTQALGTQESRGRVCGVG----------------------------------ELEAHIQMTHSTPTSGCGSC
                                 NDVL QALGT+E  GRV GVG                                  ELEA I    STP S  G+C
Subjt:  ------------------------PNDVLTQALGTQESRGRVCGVG----------------------------------ELEAHIQMTHSTPTSGCGSC

Query:  SKPRLAYKIESKKKPEDDKKEKASMRIAKKKEVVSESTINLPLTLKSVLRFSEKVMNKESGILFQLPVELFGLSRKRCVLQEDIIDFCSMQEVKTLTLVA
        S+P +                   +++  +KEVV EST  LPL LKS+LR+ EKVM K+S I F LP ++FG+SRK  VL+EDIID C M +VKT TLVA
Subjt:  SKPRLAYKIESKKKPEDDKKEKASMRIAKKKEVVSESTINLPLTLKSVLRFSEKVMNKESGILFQLPVELFGLSRKRCVLQEDIIDFCSMQEVKTLTLVA

Query:  YMAYLHSYYVVSKK
        YM YL+S  + SK+
Subjt:  YMAYLHSYYVVSKK

KAA0046847.1 putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]2.9e-5245.17Show/hide
Query:  GPIIIFNVTHVRSAGERKLVEYNDNGVPIGENGAKLNSFIGSCAHYHIPITYATWKRVCAKLKDKIYNIVEDEISRTNDPLGNKQLSPNDVLTQALGTQE
        GP I+F+VT +RS G++ +V+YN +G PI EN AKL SFIGS  HYH+P   ++WK V A++KDKI+  VEDEIS   D     +   N+VLTQALGT+E
Subjt:  GPIIIFNVTHVRSAGERKLVEYNDNGVPIGENGAKLNSFIGSCAHYHIPITYATWKRVCAKLKDKIYNIVEDEISRTNDPLGNKQLSPNDVLTQALGTQE

Query:  SRGRVCGVG----------------------------------ELEAHIQMTHSTPTSGCGSCSKPRLAYKIESK---------KKPEDD----KKEKAS
          GRV  VG                                  ELEA I+   STP S   SCS+P +   IE K          KP+++    K+E+  
Subjt:  SRGRVCGVG----------------------------------ELEAHIQMTHSTPTSGCGSCSKPRLAYKIESK---------KKPEDD----KKEKAS

Query:  MRIAKKKEVVSESTINLPLTLKSVLRFSEKVMNKESGILFQLPVELFGLSRKRCVLQEDIIDFCSMQEVKTLTLVAYMAYLHSYYVVSKK
        +++  +KEVV ES    PL LKS+LR++EKVM K+S I F LP +LFG+SRK  +L+EDIID C+M EVKT TLVAYM YL+S  + SK+
Subjt:  MRIAKKKEVVSESTINLPLTLKSVLRFSEKVMNKESGILFQLPVELFGLSRKRCVLQEDIIDFCSMQEVKTLTLVAYMAYLHSYYVVSKK

TYK04871.1 putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]2.0e-4841.96Show/hide
Query:  GPIIIFNVTHVRSAGERKLVEYNDNGVPIGENGAKLNSFIGSCAHYHIPITYATWKRVCAKLKDKIYNIVE-----------------------------
        GP I+F+VT +RS G++K+V YN++G PIGENGAKL SFIGS  HYH+PITY +WK V A+LKDKI+  VE                             
Subjt:  GPIIIFNVTHVRSAGERKLVEYNDNGVPIGENGAKLNSFIGSCAHYHIPITYATWKRVCAKLKDKIYNIVE-----------------------------

Query:  ---------DEISRTNDPLGNKQLSPNDVLTQALGTQESRGRV----------CGVGELEAHIQMTHSTPTSGCGSCSKPRLAYKIESKKK---------
                 DEIS   D     +   NDVLTQAL  + S+               V ELEA I+   ST  S  G  S+P +   IE K K         
Subjt:  ---------DEISRTNDPLGNKQLSPNDVLTQALGTQESRGRV----------CGVGELEAHIQMTHSTPTSGCGSCSKPRLAYKIESKKK---------

Query:  ----------------PE-DDKKEKASMRIAKKKEVVSESTINLPLTLKSVLRFSEKVMNKESGILFQLPVELFGLSRKRCVLQEDIIDFCSMQEVKTLT
                        PE D  KE+  +++  +KEVV EST  LPL LKS+LR++EKVM K+S I F L  +LFG+SRK  VL+EDI+DFC+M E+KT  
Subjt:  ----------------PE-DDKKEKASMRIAKKKEVVSESTINLPLTLKSVLRFSEKVMNKESGILFQLPVELFGLSRKRCVLQEDIIDFCSMQEVKTLT

Query:  LVAYMAYLHSYYVVSKK
        LVAYM YL+S  + SK+
Subjt:  LVAYMAYLHSYYVVSKK

TYK21059.1 transposase [Cucumis melo var. makuwa]2.7e-5043.88Show/hide
Query:  EHIEVDDGQEIDGPIIIFNVTHVRSAGERKLVEYNDNGVPIGENGAKLNSFIGSCAHYHIPITYATWKRVCAKLKDKIYNIVEDEISRTNDPL-------
        EH+E    Q    P I+F+ T VRS  ERKLVEYN +GVPIGENGAKLNSFIGSC HYHI I YATW  V A+LK+KIY IVE  I      L       
Subjt:  EHIEVDDGQEIDGPIIIFNVTHVRSAGERKLVEYNDNGVPIGENGAKLNSFIGSCAHYHIPITYATWKRVCAKLKDKIYNIVEDEISRTNDPL-------

Query:  ---------------------------GNKQLSPNDVLTQALG-------------TQESRGRVCGVGELEAHIQMTHSTPTSGCGSCSKPRLAYKIESK
                                    +K+ SPN+VLTQAL              ++E+      V ELE     T STPT   GSCS+PRL Y I+ K
Subjt:  ---------------------------GNKQLSPNDVLTQALG-------------TQESRGRVCGVGELEAHIQMTHSTPTSGCGSCSKPRLAYKIESK

Query:  KKPEDD--KKE------------KASMRIAKKKEVVSESTINLPLTLKSVLRFSEKVMNKESGILFQLPVELFGLSRKRCVLQEDIIDFCSMQEVKTLTL
        +  E +  KKE            K ++ +  +KEVV ES + +PL LK++LRF+EKVM                L RK CVL+EDIIDFC+M+EVKTLTL
Subjt:  KKPEDD--KKE------------KASMRIAKKKEVVSESTINLPLTLKSVLRFSEKVMNKESGILFQLPVELFGLSRKRCVLQEDIIDFCSMQEVKTLTL

Query:  VAYMAYLHSYYVVSKKFHSTYLLV--CLLFVKNNT
        VAYM YLHS   +     S Y+ V   L+FV +NT
Subjt:  VAYMAYLHSYYVVSKKFHSTYLLV--CLLFVKNNT

TYK30021.1 hypothetical protein E5676_scaffold587G00260 [Cucumis melo var. makuwa]1.6e-5036.45Show/hide
Query:  EHIEVDDGQEIDGPIIIFNVTHVRSAGERKLVEYNDNGVPIGENGAKLNSFIGSCAHYHIPITYATWKRVCAKLKDKIYNIVE-----------------
        E++E    Q   GP I+F+VT VRS GERKLVEYN++GVPIGENG KLNSFIGSC HYHIPI YATW  V  + K+KIY  VE                 
Subjt:  EHIEVDDGQEIDGPIIIFNVTHVRSAGERKLVEYNDNGVPIGENGAKLNSFIGSCAHYHIPITYATWKRVCAKLKDKIYNIVE-----------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------DEISRTNDPLGNKQLSPNDVLTQALGTQESRGRVCGVG-------------------------------------ELEAHIQMT
                        DEIS+T     +K+ SPNDVLTQALGT+ES  RV GVG                                     ELE     T
Subjt:  ----------------DEISRTNDPLGNKQLSPNDVLTQALGTQESRGRVCGVG-------------------------------------ELEAHIQMT

Query:  HSTPTSGCGSCSKPRLAYKIESKKKPEDD--KKE------------KASMRIAKKKEVVSESTINLPLTLKSVLRFSEKVMNKESGILFQLPVELFGLSR
         STPTS  GSCS+PRL Y I+ KK  E +  K+E            + ++ +  +KEVV ES I +P  LK++LRF+EKVM+K+SGI +QLP  LFG+ R
Subjt:  HSTPTSGCGSCSKPRLAYKIESKKKPEDD--KKE------------KASMRIAKKKEVVSESTINLPLTLKSVLRFSEKVMNKESGILFQLPVELFGLSR

Query:  KRCVLQEDIIDFCSMQEVKTLTLVAYMA
        K CVLQEDIIDFC+M+EVKTLTLVAYMA
Subjt:  KRCVLQEDIIDFCSMQEVKTLTLVAYMA

TrEMBL top hitse value%identityAlignment
A0A5A7T7N8 Putative serine/threonine-protein kinase nek24.5e-5142.36Show/hide
Query:  GPIIIFNVTHVRSAGERKLVEYNDNGVPIGENGAKLNSFIGSCAHYHIPITYATWKRVCAKLKDKIYNIVEDEISRTNDPLG----------NKQLS---
        GP  +F+VT +RS G++K+V YN++G PIGENGAKL SFIGS  HYH+PITY +WK V A+LKDKI+  VE E S   D +           NKQ     
Subjt:  GPIIIFNVTHVRSAGERKLVEYNDNGVPIGENGAKLNSFIGSCAHYHIPITYATWKRVCAKLKDKIYNIVEDEISRTNDPLG----------NKQLS---

Query:  ------------------------PNDVLTQALGTQESRGRVCGVG----------------------------------ELEAHIQMTHSTPTSGCGSC
                                 NDVL QALGT+E  GRV GVG                                  ELEA I    STP S  G+C
Subjt:  ------------------------PNDVLTQALGTQESRGRVCGVG----------------------------------ELEAHIQMTHSTPTSGCGSC

Query:  SKPRLAYKIESKKKPEDDKKEKASMRIAKKKEVVSESTINLPLTLKSVLRFSEKVMNKESGILFQLPVELFGLSRKRCVLQEDIIDFCSMQEVKTLTLVA
        S+P +                   +++  +KEVV EST  LPL LKS+LR+ EKVM K+S I F LP ++FG+SRK  VL+EDIID C M +VKT TLVA
Subjt:  SKPRLAYKIESKKKPEDDKKEKASMRIAKKKEVVSESTINLPLTLKSVLRFSEKVMNKESGILFQLPVELFGLSRKRCVLQEDIIDFCSMQEVKTLTLVA

Query:  YMAYLHSYYVVSKK
        YM YL+S  + SK+
Subjt:  YMAYLHSYYVVSKK

A0A5A7TY61 Putative serine/threonine-protein kinase nek21.4e-5245.17Show/hide
Query:  GPIIIFNVTHVRSAGERKLVEYNDNGVPIGENGAKLNSFIGSCAHYHIPITYATWKRVCAKLKDKIYNIVEDEISRTNDPLGNKQLSPNDVLTQALGTQE
        GP I+F+VT +RS G++ +V+YN +G PI EN AKL SFIGS  HYH+P   ++WK V A++KDKI+  VEDEIS   D     +   N+VLTQALGT+E
Subjt:  GPIIIFNVTHVRSAGERKLVEYNDNGVPIGENGAKLNSFIGSCAHYHIPITYATWKRVCAKLKDKIYNIVEDEISRTNDPLGNKQLSPNDVLTQALGTQE

Query:  SRGRVCGVG----------------------------------ELEAHIQMTHSTPTSGCGSCSKPRLAYKIESK---------KKPEDD----KKEKAS
          GRV  VG                                  ELEA I+   STP S   SCS+P +   IE K          KP+++    K+E+  
Subjt:  SRGRVCGVG----------------------------------ELEAHIQMTHSTPTSGCGSCSKPRLAYKIESK---------KKPEDD----KKEKAS

Query:  MRIAKKKEVVSESTINLPLTLKSVLRFSEKVMNKESGILFQLPVELFGLSRKRCVLQEDIIDFCSMQEVKTLTLVAYMAYLHSYYVVSKK
        +++  +KEVV ES    PL LKS+LR++EKVM K+S I F LP +LFG+SRK  +L+EDIID C+M EVKT TLVAYM YL+S  + SK+
Subjt:  MRIAKKKEVVSESTINLPLTLKSVLRFSEKVMNKESGILFQLPVELFGLSRKRCVLQEDIIDFCSMQEVKTLTLVAYMAYLHSYYVVSKK

A0A5D3BYV3 Putative serine/threonine-protein kinase nek29.5e-4941.96Show/hide
Query:  GPIIIFNVTHVRSAGERKLVEYNDNGVPIGENGAKLNSFIGSCAHYHIPITYATWKRVCAKLKDKIYNIVE-----------------------------
        GP I+F+VT +RS G++K+V YN++G PIGENGAKL SFIGS  HYH+PITY +WK V A+LKDKI+  VE                             
Subjt:  GPIIIFNVTHVRSAGERKLVEYNDNGVPIGENGAKLNSFIGSCAHYHIPITYATWKRVCAKLKDKIYNIVE-----------------------------

Query:  ---------DEISRTNDPLGNKQLSPNDVLTQALGTQESRGRV----------CGVGELEAHIQMTHSTPTSGCGSCSKPRLAYKIESKKK---------
                 DEIS   D     +   NDVLTQAL  + S+               V ELEA I+   ST  S  G  S+P +   IE K K         
Subjt:  ---------DEISRTNDPLGNKQLSPNDVLTQALGTQESRGRV----------CGVGELEAHIQMTHSTPTSGCGSCSKPRLAYKIESKKK---------

Query:  ----------------PE-DDKKEKASMRIAKKKEVVSESTINLPLTLKSVLRFSEKVMNKESGILFQLPVELFGLSRKRCVLQEDIIDFCSMQEVKTLT
                        PE D  KE+  +++  +KEVV EST  LPL LKS+LR++EKVM K+S I F L  +LFG+SRK  VL+EDI+DFC+M E+KT  
Subjt:  ----------------PE-DDKKEKASMRIAKKKEVVSESTINLPLTLKSVLRFSEKVMNKESGILFQLPVELFGLSRKRCVLQEDIIDFCSMQEVKTLT

Query:  LVAYMAYLHSYYVVSKK
        LVAYM YL+S  + SK+
Subjt:  LVAYMAYLHSYYVVSKK

A0A5D3DCP7 Transposase1.3e-5043.88Show/hide
Query:  EHIEVDDGQEIDGPIIIFNVTHVRSAGERKLVEYNDNGVPIGENGAKLNSFIGSCAHYHIPITYATWKRVCAKLKDKIYNIVEDEISRTNDPL-------
        EH+E    Q    P I+F+ T VRS  ERKLVEYN +GVPIGENGAKLNSFIGSC HYHI I YATW  V A+LK+KIY IVE  I      L       
Subjt:  EHIEVDDGQEIDGPIIIFNVTHVRSAGERKLVEYNDNGVPIGENGAKLNSFIGSCAHYHIPITYATWKRVCAKLKDKIYNIVEDEISRTNDPL-------

Query:  ---------------------------GNKQLSPNDVLTQALG-------------TQESRGRVCGVGELEAHIQMTHSTPTSGCGSCSKPRLAYKIESK
                                    +K+ SPN+VLTQAL              ++E+      V ELE     T STPT   GSCS+PRL Y I+ K
Subjt:  ---------------------------GNKQLSPNDVLTQALG-------------TQESRGRVCGVGELEAHIQMTHSTPTSGCGSCSKPRLAYKIESK

Query:  KKPEDD--KKE------------KASMRIAKKKEVVSESTINLPLTLKSVLRFSEKVMNKESGILFQLPVELFGLSRKRCVLQEDIIDFCSMQEVKTLTL
        +  E +  KKE            K ++ +  +KEVV ES + +PL LK++LRF+EKVM                L RK CVL+EDIIDFC+M+EVKTLTL
Subjt:  KKPEDD--KKE------------KASMRIAKKKEVVSESTINLPLTLKSVLRFSEKVMNKESGILFQLPVELFGLSRKRCVLQEDIIDFCSMQEVKTLTL

Query:  VAYMAYLHSYYVVSKKFHSTYLLV--CLLFVKNNT
        VAYM YLHS   +     S Y+ V   L+FV +NT
Subjt:  VAYMAYLHSYYVVSKKFHSTYLLV--CLLFVKNNT

A0A5D3E359 Uncharacterized protein7.7e-5136.45Show/hide
Query:  EHIEVDDGQEIDGPIIIFNVTHVRSAGERKLVEYNDNGVPIGENGAKLNSFIGSCAHYHIPITYATWKRVCAKLKDKIYNIVE-----------------
        E++E    Q   GP I+F+VT VRS GERKLVEYN++GVPIGENG KLNSFIGSC HYHIPI YATW  V  + K+KIY  VE                 
Subjt:  EHIEVDDGQEIDGPIIIFNVTHVRSAGERKLVEYNDNGVPIGENGAKLNSFIGSCAHYHIPITYATWKRVCAKLKDKIYNIVE-----------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------DEISRTNDPLGNKQLSPNDVLTQALGTQESRGRVCGVG-------------------------------------ELEAHIQMT
                        DEIS+T     +K+ SPNDVLTQALGT+ES  RV GVG                                     ELE     T
Subjt:  ----------------DEISRTNDPLGNKQLSPNDVLTQALGTQESRGRVCGVG-------------------------------------ELEAHIQMT

Query:  HSTPTSGCGSCSKPRLAYKIESKKKPEDD--KKE------------KASMRIAKKKEVVSESTINLPLTLKSVLRFSEKVMNKESGILFQLPVELFGLSR
         STPTS  GSCS+PRL Y I+ KK  E +  K+E            + ++ +  +KEVV ES I +P  LK++LRF+EKVM+K+SGI +QLP  LFG+ R
Subjt:  HSTPTSGCGSCSKPRLAYKIESKKKPEDD--KKE------------KASMRIAKKKEVVSESTINLPLTLKSVLRFSEKVMNKESGILFQLPVELFGLSR

Query:  KRCVLQEDIIDFCSMQEVKTLTLVAYMA
        K CVLQEDIIDFC+M+EVKTLTLVAYMA
Subjt:  KRCVLQEDIIDFCSMQEVKTLTLVAYMA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCACATCGAAGTGGATGATGGCCAGGAAATTGATGGACCTATCATTATATTCAACGTGACACATGTTAGGAGTGCAGGAGAGAGGAAGTTGGTGGAATATAATGA
CAACGGAGTACCTATTGGTGAAAATGGAGCCAAGTTAAACTCTTTTATTGGGTCGTGTGCGCATTATCATATCCCCATTACATATGCAACATGGAAGCGTGTGTGTGCTA
AGTTGAAAGATAAGATATATAACATAGTTGAGGACGAAATCTCAAGGACCAATGATCCACTCGGCAACAAACAACTATCTCCTAATGATGTTTTGACTCAAGCTTTGGGT
ACACAAGAAAGCAGAGGGCGTGTCTGTGGAGTTGGCGAATTGGAAGCTCACATTCAAATGACACACTCTACACCAACATCTGGATGTGGAAGTTGCTCCAAACCAAGACT
GGCATACAAGATTGAATCCAAAAAGAAACCAGAAGACGACAAGAAGGAGAAAGCATCAATGAGAATTGCTAAGAAAAAAGAGGTTGTTAGTGAGTCAACAATCAATTTGC
CACTAACTTTAAAGTCAGTACTTAGGTTTTCTGAAAAGGTAATGAACAAAGAATCTGGCATTTTGTTCCAACTACCTGTTGAGCTGTTTGGTTTAAGTAGAAAACGTTGT
GTCTTGCAAGAAGATATTATTGACTTTTGTAGCATGCAAGAAGTTAAGACTTTGACCTTGGTGGCTTATATGGCGTATTTGCACTCATACTATGTTGTTTCAAAGAAGTT
TCACAGTACATATTTGTTGGTTTGTCTCTTATTTGTTAAAAACAACACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCACATCGAAGTGGATGATGGCCAGGAAATTGATGGACCTATCATTATATTCAACGTGACACATGTTAGGAGTGCAGGAGAGAGGAAGTTGGTGGAATATAATGA
CAACGGAGTACCTATTGGTGAAAATGGAGCCAAGTTAAACTCTTTTATTGGGTCGTGTGCGCATTATCATATCCCCATTACATATGCAACATGGAAGCGTGTGTGTGCTA
AGTTGAAAGATAAGATATATAACATAGTTGAGGACGAAATCTCAAGGACCAATGATCCACTCGGCAACAAACAACTATCTCCTAATGATGTTTTGACTCAAGCTTTGGGT
ACACAAGAAAGCAGAGGGCGTGTCTGTGGAGTTGGCGAATTGGAAGCTCACATTCAAATGACACACTCTACACCAACATCTGGATGTGGAAGTTGCTCCAAACCAAGACT
GGCATACAAGATTGAATCCAAAAAGAAACCAGAAGACGACAAGAAGGAGAAAGCATCAATGAGAATTGCTAAGAAAAAAGAGGTTGTTAGTGAGTCAACAATCAATTTGC
CACTAACTTTAAAGTCAGTACTTAGGTTTTCTGAAAAGGTAATGAACAAAGAATCTGGCATTTTGTTCCAACTACCTGTTGAGCTGTTTGGTTTAAGTAGAAAACGTTGT
GTCTTGCAAGAAGATATTATTGACTTTTGTAGCATGCAAGAAGTTAAGACTTTGACCTTGGTGGCTTATATGGCGTATTTGCACTCATACTATGTTGTTTCAAAGAAGTT
TCACAGTACATATTTGTTGGTTTGTCTCTTATTTGTTAAAAACAACACTTAA
Protein sequenceShow/hide protein sequence
MEHIEVDDGQEIDGPIIIFNVTHVRSAGERKLVEYNDNGVPIGENGAKLNSFIGSCAHYHIPITYATWKRVCAKLKDKIYNIVEDEISRTNDPLGNKQLSPNDVLTQALG
TQESRGRVCGVGELEAHIQMTHSTPTSGCGSCSKPRLAYKIESKKKPEDDKKEKASMRIAKKKEVVSESTINLPLTLKSVLRFSEKVMNKESGILFQLPVELFGLSRKRC
VLQEDIIDFCSMQEVKTLTLVAYMAYLHSYYVVSKKFHSTYLLVCLLFVKNNT