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Clc02G09540 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G09540
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionpatellin-1-like
Genome locationClcChr02:13652798..13654120
RNA-Seq ExpressionClc02G09540
SyntenyClc02G09540
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053292.1 patellin-1-like [Cucumis melo var. makuwa]1.0e-2471.61Show/hide
Query:  MATAEVVTPETALPEEATEV--VEVPPPKVEEEEAPPPVAADPPAEEVEKEEETTDPPAPEETETPVEVETKEVVVEEEPKEEKKEEEEEEEEEEE----
        MATAEVVTP+TA+PEEATEV  VEVP PKVEEEEAPPPV ADPPAEEV KEE+ TDPPA EETETPVE ETKEVVVEEE KEEK EEE  EEEE+E    
Subjt:  MATAEVVTPETALPEEATEV--VEVPPPKVEEEEAPPPVAADPPAEEVEKEEETTDPPAPEETETPVEVETKEVVVEEEPKEEKKEEEEEEEEEEE----

Query:  ---AEAVVEEESKPAEGEAPAEE-------EAVEEKPKEETEEKAEEEPAAEKAE
           AE  V EE+K +E E P EE       E VEEKP EETEEK EEE  AEKAE
Subjt:  ---AEAVVEEESKPAEGEAPAEE-------EAVEEKPKEETEEKAEEEPAAEKAE

XP_004140479.1 cilia- and flagella-associated protein 251 [Cucumis sativus]1.5e-2576.51Show/hide
Query:  MATAEVVTPETALPEEATEV--VEVPPPKVEEEEAPPPVAADPPAEEVEKEEETTDPPAPEETETPVEVETKEVVVEEEPKEEKKEEEE--EEEEEEE--
        MATAEVVTPETALPEEATEV  VEVPPPKVEEEEAPPPV  DPPAEEV KEE+ TDPPA EE ETPVEVETKEVVVEEE KEEK EEEE  EEEE+EE  
Subjt:  MATAEVVTPETALPEEATEV--VEVPPPKVEEEEAPPPVAADPPAEEVEKEEETTDPPAPEETETPVEVETKEVVVEEEPKEEKKEEEE--EEEEEEE--

Query:  ----AEAVVEEESKPAEGEAPAEEEAVEEKPKEETEEKAEEEPAAEKAE
            AE VVEEE+K    E  AEE+AVE KP EE EEKAEEE  AEK E
Subjt:  ----AEAVVEEESKPAEGEAPAEEEAVEEKPKEETEEKAEEEPAAEKAE

XP_008455963.1 PREDICTED: patellin-1-like [Cucumis melo]1.0e-2471.61Show/hide
Query:  MATAEVVTPETALPEEATEV--VEVPPPKVEEEEAPPPVAADPPAEEVEKEEETTDPPAPEETETPVEVETKEVVVEEEPKEEKKEEEEEEEEEEE----
        MATAEVVTP+TA+PEEATEV  VEVP PKVEEEEAPPPV ADPPAEEV KEE+ TDPPA EETETPVE ETKEVVVEEE KEEK EEE  EEEE+E    
Subjt:  MATAEVVTPETALPEEATEV--VEVPPPKVEEEEAPPPVAADPPAEEVEKEEETTDPPAPEETETPVEVETKEVVVEEEPKEEKKEEEEEEEEEEE----

Query:  ---AEAVVEEESKPAEGEAPAEE-------EAVEEKPKEETEEKAEEEPAAEKAE
           AE  V EE+K +E E P EE       E VEEKP EETEEK EEE  AEKAE
Subjt:  ---AEAVVEEESKPAEGEAPAEE-------EAVEEKPKEETEEKAEEEPAAEKAE

XP_022971120.1 fibrous sheath CABYR-binding protein-like [Cucurbita maxima]1.4e-0557.41Show/hide
Query:  MATAEVVTPETALPEEATEVVEVPPPKVEEEEAPPPVAADPPAEEVEKEEETTDPPAPEETETPVEVETKEVVVEEEPKEEKKEEEEEEEEEEEAEAVVE
        MATAEVVT E AL EE TE VEVPP KVEEE    P AADPPAEEV KEE      A E  E PVEVETKEVV +EE +E K+E  EE++E E AE   E
Subjt:  MATAEVVTPETALPEEATEVVEVPPPKVEEEEAPPPVAADPPAEEVEKEEETTDPPAPEETETPVEVETKEVVVEEEPKEEKKEEEEEEEEEEEAEAVVE

Query:  E------ESKPA--------------EGEAPAEEEA--VEEKPKEETEEK-AEEEPAAEKAE
        E      ES+PA              E E  AEEEA  V+E   EE EEK AEEEPAAEKAE
Subjt:  E------ESKPA--------------EGEAPAEEEA--VEEKPKEETEEK-AEEEPAAEKAE

XP_038900947.1 cytochrome c1-like [Benincasa hispida]1.5e-3687.32Show/hide
Query:  MATAEVVTPETALPEEATEVVEVPPPKVEEEEAPPPVAADPPAEEVEKEEETTDPPAPEETETPVEVETKEVVVEEEPKEEKKEEEEEEEEEEEAEAVVE
        MATAEVV PET LPEEATEVVEVPPPKVEEEEAPPP A DPPAEEV KEEE TDPPA EETETPVEVETKEVVVEEEPKEEKK  EEEE+EEE  EAVVE
Subjt:  MATAEVVTPETALPEEATEVVEVPPPKVEEEEAPPPVAADPPAEEVEKEEETTDPPAPEETETPVEVETKEVVVEEEPKEEKKEEEEEEEEEEEAEAVVE

Query:  EESKPAEGEAPAEEEA---VEEKPKEETEEKAEEEPAAEKAE
        EESKPAE EAPAEEEA   VEEKP EETEEK EEEPAAEKAE
Subjt:  EESKPAEGEAPAEEEA---VEEKPKEETEEKAEEEPAAEKAE

TrEMBL top hitse value%identityAlignment
A0A0A0KAS3 Uncharacterized protein7.5e-2676.51Show/hide
Query:  MATAEVVTPETALPEEATEV--VEVPPPKVEEEEAPPPVAADPPAEEVEKEEETTDPPAPEETETPVEVETKEVVVEEEPKEEKKEEEE--EEEEEEE--
        MATAEVVTPETALPEEATEV  VEVPPPKVEEEEAPPPV  DPPAEEV KEE+ TDPPA EE ETPVEVETKEVVVEEE KEEK EEEE  EEEE+EE  
Subjt:  MATAEVVTPETALPEEATEV--VEVPPPKVEEEEAPPPVAADPPAEEVEKEEETTDPPAPEETETPVEVETKEVVVEEEPKEEKKEEEE--EEEEEEE--

Query:  ----AEAVVEEESKPAEGEAPAEEEAVEEKPKEETEEKAEEEPAAEKAE
            AE VVEEE+K    E  AEE+AVE KP EE EEKAEEE  AEK E
Subjt:  ----AEAVVEEESKPAEGEAPAEEEAVEEKPKEETEEKAEEEPAAEKAE

A0A1S3C239 patellin-1-like4.9e-2571.61Show/hide
Query:  MATAEVVTPETALPEEATEV--VEVPPPKVEEEEAPPPVAADPPAEEVEKEEETTDPPAPEETETPVEVETKEVVVEEEPKEEKKEEEEEEEEEEE----
        MATAEVVTP+TA+PEEATEV  VEVP PKVEEEEAPPPV ADPPAEEV KEE+ TDPPA EETETPVE ETKEVVVEEE KEEK EEE  EEEE+E    
Subjt:  MATAEVVTPETALPEEATEV--VEVPPPKVEEEEAPPPVAADPPAEEVEKEEETTDPPAPEETETPVEVETKEVVVEEEPKEEKKEEEEEEEEEEE----

Query:  ---AEAVVEEESKPAEGEAPAEE-------EAVEEKPKEETEEKAEEEPAAEKAE
           AE  V EE+K +E E P EE       E VEEKP EETEEK EEE  AEKAE
Subjt:  ---AEAVVEEESKPAEGEAPAEE-------EAVEEKPKEETEEKAEEEPAAEKAE

A0A5A7UC23 Patellin-1-like4.9e-2571.61Show/hide
Query:  MATAEVVTPETALPEEATEV--VEVPPPKVEEEEAPPPVAADPPAEEVEKEEETTDPPAPEETETPVEVETKEVVVEEEPKEEKKEEEEEEEEEEE----
        MATAEVVTP+TA+PEEATEV  VEVP PKVEEEEAPPPV ADPPAEEV KEE+ TDPPA EETETPVE ETKEVVVEEE KEEK EEE  EEEE+E    
Subjt:  MATAEVVTPETALPEEATEV--VEVPPPKVEEEEAPPPVAADPPAEEVEKEEETTDPPAPEETETPVEVETKEVVVEEEPKEEKKEEEEEEEEEEE----

Query:  ---AEAVVEEESKPAEGEAPAEE-------EAVEEKPKEETEEKAEEEPAAEKAE
           AE  V EE+K +E E P EE       E VEEKP EETEEK EEE  AEKAE
Subjt:  ---AEAVVEEESKPAEGEAPAEE-------EAVEEKPKEETEEKAEEEPAAEKAE

A0A6J1I4V1 fibrous sheath CABYR-binding protein-like6.6e-0657.41Show/hide
Query:  MATAEVVTPETALPEEATEVVEVPPPKVEEEEAPPPVAADPPAEEVEKEEETTDPPAPEETETPVEVETKEVVVEEEPKEEKKEEEEEEEEEEEAEAVVE
        MATAEVVT E AL EE TE VEVPP KVEEE    P AADPPAEEV KEE      A E  E PVEVETKEVV +EE +E K+E  EE++E E AE   E
Subjt:  MATAEVVTPETALPEEATEVVEVPPPKVEEEEAPPPVAADPPAEEVEKEEETTDPPAPEETETPVEVETKEVVVEEEPKEEKKEEEEEEEEEEEAEAVVE

Query:  E------ESKPA--------------EGEAPAEEEA--VEEKPKEETEEK-AEEEPAAEKAE
        E      ES+PA              E E  AEEEA  V+E   EE EEK AEEEPAAEKAE
Subjt:  E------ESKPA--------------EGEAPAEEEA--VEEKPKEETEEK-AEEEPAAEKAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTGCAGAGGTTGTAACACCGGAGACAGCTCTCCCAGAGGAAGCAACAGAGGTGGTGGAGGTACCACCGCCAAAGGTTGAAGAAGAAGAGGCTCCGCCTCCGGT
GGCGGCAGATCCACCAGCCGAGGAGGTGGAAAAAGAAGAAGAAACCACCGATCCCCCTGCGCCTGAAGAGACAGAAACTCCTGTTGAAGTTGAAACCAAGGAAGTAGTTG
TAGAAGAAGAGCCAAAAGAAGAGAAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGCTGAGGCTGTGGTGGAGGAGGAGAGCAAACCGGCGGAGGGTGAGGCA
CCGGCGGAGGAGGAGGCGGTGGAAGAGAAGCCTAAAGAAGAAACAGAGGAGAAAGCAGAAGAAGAACCTGCAGCAGAGAAGGCTGAGTAA
mRNA sequenceShow/hide mRNA sequence
GTAAATTGTCAAATCTCAAGATTCTTCTTTTTATAATTATTTAATTTTCATTTTTTGGACCCCACATAAACATTTCATTTCAAAATCTCAAATCATCTTCACACTGCCAC
TCCATTCTCTCTTTTCTCTGTTCTATATAAGCCACTTTGCTTCATCATTCTTCCATCCCACCCTTTCTTTCTCTGCTTCGATTTCTTTTTCTCCTTCTCTACTAGGATTT
TAGCATGGCTACTGCAGAGGTTGTAACACCGGAGACAGCTCTCCCAGAGGAAGCAACAGAGGTGGTGGAGGTACCACCGCCAAAGGTTGAAGAAGAAGAGGCTCCGCCTC
CGGTGGCGGCAGATCCACCAGCCGAGGAGGTGGAAAAAGAAGAAGAAACCACCGATCCCCCTGCGCCTGAAGAGACAGAAACTCCTGTTGAAGTTGAAACCAAGGAAGTA
GTTGTAGAAGAAGAGCCAAAAGAAGAGAAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGCTGAGGCTGTGGTGGAGGAGGAGAGCAAACCGGCGGAGGGTGA
GGCACCGGCGGAGGAGGAGGCGGTGGAAGAGAAGCCTAAAGAAGAAACAGAGGAGAAAGCAGAAGAAGAACCTGCAGCAGAGAAGGCTGAGTAATTAAATTTCAATTACA
AATTATGGGTTGTAATGAAGAAAGTTAATGGGGGGTTTAAAAAATTTGTGTATGTGAAGTGAAGTGAAGTGGTTGATTAAGTGGGAAGGAGTGTAATAAGTTAAAAGGTG
TATAGGGATTAGGAGACCTTGTCTTTGTTTTTGTGGATGTCTGTTCAGAGTGCAATATTTTTGCCACTTTTGTTTGTTATAATAACTTACACCCATATATGTCTCTATGA
AAATATTGCATCAATGTAAGAGAAAACAAGTCATAATGTGTTTTTGTTCATATACAGCTTTGGTTATCTCATACAAGTTTACCTAAAATCACCTTTCTAATTTAAATCAG
CAAGTTGGAATTAAGATTCATCAACCACCATAACCCGCTTACTAATTTAATCATTTTTCTACATTTCTTGTTTCTTGAAAATGCG
Protein sequenceShow/hide protein sequence
MATAEVVTPETALPEEATEVVEVPPPKVEEEEAPPPVAADPPAEEVEKEEETTDPPAPEETETPVEVETKEVVVEEEPKEEKKEEEEEEEEEEEAEAVVEEESKPAEGEA
PAEEEAVEEKPKEETEEKAEEEPAAEKAE