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Clc02G09760 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G09760
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionGag-protease polyprotein
Genome locationClcChr02:14242355..14244072
RNA-Seq ExpressionClc02G09760
SyntenyClc02G09760
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038882311.1 uncharacterized protein LOC120073551 [Benincasa hispida]1.8e-0854.24Show/hide
Query:  EYEREFNKLSHFTPKLVATEKDKMKKFVQGLGDRVRGFIQALEPTSYALTLYVATQIDS
        EYE++F+KLSHF PKLVATE  +   F+QGL  R+RG + ALE  +YA  L+ A +ID+
Subjt:  EYEREFNKLSHFTPKLVATEKDKMKKFVQGLGDRVRGFIQALEPTSYALTLYVATQIDS

XP_038883046.1 uncharacterized protein LOC120074107 [Benincasa hispida]7.6e-0749.15Show/hide
Query:  EYEREFNKLSHFTPKLVATEKDKMKKFVQGLGDRVRGFIQALEPTSYALTLYVATQIDS
        +YE+EF+KLSHFTP+LVATE  + ++F+QGL   +RG + AL+  +Y   L  A +ID+
Subjt:  EYEREFNKLSHFTPKLVATEKDKMKKFVQGLGDRVRGFIQALEPTSYALTLYVATQIDS

XP_038884794.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120075457 [Benincasa hispida]1.7e-0642.86Show/hide
Query:  GTRSAE-YEREFNKLSHFTPKLVATEKDKMKKFVQGLGDRVRGFIQALEPTSYALTLYVATQIDSRVVDE
        G RS E Y++EF+ LSHF P+L ATE  + ++FVQGL D ++G ++A +PT++   L +  ++D +  DE
Subjt:  GTRSAE-YEREFNKLSHFTPKLVATEKDKMKKFVQGLGDRVRGFIQALEPTSYALTLYVATQIDSRVVDE

XP_038891712.1 uncharacterized protein LOC120081110 [Benincasa hispida]5.8e-0744.29Show/hide
Query:  GTRSA-EYEREFNKLSHFTPKLVATEKDKMKKFVQGLGDRVRGFIQALEPTSYALTLYVATQIDSRVVDE
        G RS  EY++EF+ LS F P+LVATE  + ++F+QGL + +RG +QA +PT++   L +A ++D +  DE
Subjt:  GTRSA-EYEREFNKLSHFTPKLVATEKDKMKKFVQGLGDRVRGFIQALEPTSYALTLYVATQIDSRVVDE

XP_038895970.1 uncharacterized protein LOC120084143 [Benincasa hispida]1.3e-0650Show/hide
Query:  EYEREFNKLSHFTPKLVATEKDKMKKFVQGLGDRVRGFIQALEPTSYALTLYVATQI--DSRVVDE
        EYE+EF+KLS FTPKLVATE  ++++F+ GL   ++G + AL+  +YA TL  A +I  DS+V +E
Subjt:  EYEREFNKLSHFTPKLVATEKDKMKKFVQGLGDRVRGFIQALEPTSYALTLYVATQI--DSRVVDE

TrEMBL top hitse value%identityAlignment
A0A5D3E4I7 Gag-protease polyprotein5.0e-0441.27Show/hide
Query:  GTRSAE-YEREFNKLSHFTPKLVATEKDKMKKFVQGLGDRVRGFIQALEPTSYALTLYVATQI
        G R+ E Y+ EF+ LSHF PK++ATE  +  KFV+GL   ++G ++A  P +Y   L +A  +
Subjt:  GTRSAE-YEREFNKLSHFTPKLVATEKDKMKKFVQGLGDRVRGFIQALEPTSYALTLYVATQI

A0A6J1DSJ6 uncharacterized protein LOC1110235126.9e-0648.33Show/hide
Query:  EYEREFNKLSHFTPKLVATEKDKMKKFVQGLGDRVRGFIQALEPTSYALTLYVATQIDSR
        EY+REF KLS F P+LV TE  K ++F+  L D  +GF+  L P  YA  L  A  ID+R
Subjt:  EYEREFNKLSHFTPKLVATEKDKMKKFVQGLGDRVRGFIQALEPTSYALTLYVATQIDSR

A0A6J1EH24 uncharacterized protein LOC1114324742.9e-0438.1Show/hide
Query:  EYEREFNKLSHFTPKLVATEKDKMKKFVQGLGDRVRGFIQALEPTSYALTLYVATQIDSRVVD
        +Y++EFN+LS F+P  V+TE+ K ++F+ GL + +RG++ +   + Y   L +AT ID+   D
Subjt:  EYEREFNKLSHFTPKLVATEKDKMKKFVQGLGDRVRGFIQALEPTSYALTLYVATQIDSRVVD

A0A6J1GZS7 uncharacterized protein LOC1114587303.8e-0438.1Show/hide
Query:  EYEREFNKLSHFTPKLVATEKDKMKKFVQGLGDRVRGFIQALEPTSYALTLYVATQIDSRVVD
        +Y++EFN+LS F+P  V+TE+ K ++F+ GL + +RG++ +   + Y   L +AT ID+   D
Subjt:  EYEREFNKLSHFTPKLVATEKDKMKKFVQGLGDRVRGFIQALEPTSYALTLYVATQIDSRVVD

A0A6P6XE47 uncharacterized protein LOC1137409702.9e-0445Show/hide
Query:  AEYEREFNKLSHFTPKLVATEKDKMKKFVQGLGDRVRGFIQALEPTSYALTLYVATQIDS
        AEYE  F KLS FTP+LVATE+ ++++F+QGL   ++  + A++ TS++ T+  A +I+S
Subjt:  AEYEREFNKLSHFTPKLVATEKDKMKKFVQGLGDRVRGFIQALEPTSYALTLYVATQIDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGACCGTGAACCTATGAGTTCACTACTATGGATGATCATGAATCGACAGGTTATGACAGCAAGAGGTCAAGGAAGGGATAGTCAAGTCAGAAATGTTATCGGAAG
GGTAGATCACCTTCCAATAAAAGATCCTCTTGCACAAAAGAACCCTCTAGTGCCACAGAATACAAGAGTTGACTTGAGCAGTAGTGGCAGAGTAGGTAGCTTAGCATGTC
GAAGCTCAACTGGTACTAGATCAGCAGAGTATGAAAGGGAGTTTAACAAGTTGTCCCATTTTACTCCCAAGCTTGTGGCCACAGAGAAGGACAAGATGAAAAAATTTGTT
CAGGGTCTAGGAGATAGAGTGCGTGGCTTTATACAAGCCTTGGAGCCAACTAGCTATGCATTGACACTCTATGTAGCTACACAGATAGATTCCCGTGTAGTGGATGAATA
A
mRNA sequenceShow/hide mRNA sequence
ATGTATGACCGTGAACCTATGAGTTCACTACTATGGATGATCATGAATCGACAGGTTATGACAGCAAGAGGTCAAGGAAGGGATAGTCAAGTCAGAAATGTTATCGGAAG
GGTAGATCACCTTCCAATAAAAGATCCTCTTGCACAAAAGAACCCTCTAGTGCCACAGAATACAAGAGTTGACTTGAGCAGTAGTGGCAGAGTAGGTAGCTTAGCATGTC
GAAGCTCAACTGGTACTAGATCAGCAGAGTATGAAAGGGAGTTTAACAAGTTGTCCCATTTTACTCCCAAGCTTGTGGCCACAGAGAAGGACAAGATGAAAAAATTTGTT
CAGGGTCTAGGAGATAGAGTGCGTGGCTTTATACAAGCCTTGGAGCCAACTAGCTATGCATTGACACTCTATGTAGCTACACAGATAGATTCCCGTGTAGTGGATGAATA
A
Protein sequenceShow/hide protein sequence
MYDREPMSSLLWMIMNRQVMTARGQGRDSQVRNVIGRVDHLPIKDPLAQKNPLVPQNTRVDLSSSGRVGSLACRSSTGTRSAEYEREFNKLSHFTPKLVATEKDKMKKFV
QGLGDRVRGFIQALEPTSYALTLYVATQIDSRVVDE