; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G09870 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G09870
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionU11/U12 small nuclear ribonucleoprotein 65 kDa protein
Genome locationClcChr02:14796902..14819586
RNA-Seq ExpressionClc02G09870
SyntenyClc02G09870
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139973.1 U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X1 [Cucumis sativus]2.0e-14686.88Show/hide
Query:  MEDAATKDAISKDHRSKYYTEGMRARPLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
        ME AA KDAISKDH S+ +TEGMRARPLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
Subjt:  MEDAATKDAISKDHRSKYYTEGMRARPLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP

Query:  PCIPAPPSPSLTLPPLPPLATPRPQVTNMSSDESEMESSEEDVEGKYNSSGVTKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
        P IPAPPSPSLTLPPLPP  T R QVTNM SDESEMESSEEDVEGKYN SGV+KTAKSG KR RCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
Subjt:  PCIPAPPSPSLTLPPLPPLATPRPQVTNMSSDESEMESSEEDVEGKYNSSGVTKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK

Query:  NPVIQIRIAPKVIHDGKVNNINNDGEEREKEANDLKPYATLEDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDVLNDDLYYIFGFLVERLDEG
        NPVIQIRIAPKVIHDGKV NINNDGEE EKEA+DLKPYATLEDLERGKLPPEEILSLPMFKNYT G+PTSVLYIKNLAKDVLNDDLYYIFG L E +DE 
Subjt:  NPVIQIRIAPKVIHDGKVNNINNDGEEREKEANDLKPYATLEDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDVLNDDLYYIFGFLVERLDEG

Query:  GMAM-IHFLCLRRVQGLGFL
          A+ +  +   R++G  F+
Subjt:  GMAM-IHFLCLRRVQGLGFL

XP_008448172.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X1 [Cucumis melo]2.8e-14586.56Show/hide
Query:  MEDAATKDAISKDHRSKYYTEGMRARPLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
        MEDAA K AISKDH S+ +TEGMRARPLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
Subjt:  MEDAATKDAISKDHRSKYYTEGMRARPLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP

Query:  PCIPAPPSPSLTLPPLPPLATPRPQVTNMSSDESEMESSEEDVEGKYNSSGVTKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
        P  PAPPSPSLTLPPLPP AT R QVTNM SDESEMESSEEDVEGKYNSSGV+KTAKSG KR RCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
Subjt:  PCIPAPPSPSLTLPPLPPLATPRPQVTNMSSDESEMESSEEDVEGKYNSSGVTKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK

Query:  NPVIQIRIAPKVIHDGKVNNINNDGEEREKEANDLKPYATLEDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDVLNDDLYYIFGFLVERLDEG
        NPVIQIRIAPKVIHDGKV+  NNDGE  EKEA+DLKPYATLEDLERGKLPPEEILSLPMFKNYT GSPTSVLYIKNLAKDVLNDDLYYIFG L E +DE 
Subjt:  NPVIQIRIAPKVIHDGKVNNINNDGEEREKEANDLKPYATLEDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDVLNDDLYYIFGFLVERLDEG

Query:  GMAM-IHFLCLRRVQGLGFL
          A+ +  +   R++G  F+
Subjt:  GMAM-IHFLCLRRVQGLGFL

XP_011656912.1 U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X3 [Cucumis sativus]2.0e-14686.88Show/hide
Query:  MEDAATKDAISKDHRSKYYTEGMRARPLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
        ME AA KDAISKDH S+ +TEGMRARPLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
Subjt:  MEDAATKDAISKDHRSKYYTEGMRARPLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP

Query:  PCIPAPPSPSLTLPPLPPLATPRPQVTNMSSDESEMESSEEDVEGKYNSSGVTKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
        P IPAPPSPSLTLPPLPP  T R QVTNM SDESEMESSEEDVEGKYN SGV+KTAKSG KR RCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
Subjt:  PCIPAPPSPSLTLPPLPPLATPRPQVTNMSSDESEMESSEEDVEGKYNSSGVTKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK

Query:  NPVIQIRIAPKVIHDGKVNNINNDGEEREKEANDLKPYATLEDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDVLNDDLYYIFGFLVERLDEG
        NPVIQIRIAPKVIHDGKV NINNDGEE EKEA+DLKPYATLEDLERGKLPPEEILSLPMFKNYT G+PTSVLYIKNLAKDVLNDDLYYIFG L E +DE 
Subjt:  NPVIQIRIAPKVIHDGKVNNINNDGEEREKEANDLKPYATLEDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDVLNDDLYYIFGFLVERLDEG

Query:  GMAM-IHFLCLRRVQGLGFL
          A+ +  +   R++G  F+
Subjt:  GMAM-IHFLCLRRVQGLGFL

XP_031743237.1 U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X2 [Cucumis sativus]2.0e-14686.88Show/hide
Query:  MEDAATKDAISKDHRSKYYTEGMRARPLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
        ME AA KDAISKDH S+ +TEGMRARPLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
Subjt:  MEDAATKDAISKDHRSKYYTEGMRARPLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP

Query:  PCIPAPPSPSLTLPPLPPLATPRPQVTNMSSDESEMESSEEDVEGKYNSSGVTKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
        P IPAPPSPSLTLPPLPP  T R QVTNM SDESEMESSEEDVEGKYN SGV+KTAKSG KR RCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
Subjt:  PCIPAPPSPSLTLPPLPPLATPRPQVTNMSSDESEMESSEEDVEGKYNSSGVTKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK

Query:  NPVIQIRIAPKVIHDGKVNNINNDGEEREKEANDLKPYATLEDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDVLNDDLYYIFGFLVERLDEG
        NPVIQIRIAPKVIHDGKV NINNDGEE EKEA+DLKPYATLEDLERGKLPPEEILSLPMFKNYT G+PTSVLYIKNLAKDVLNDDLYYIFG L E +DE 
Subjt:  NPVIQIRIAPKVIHDGKVNNINNDGEEREKEANDLKPYATLEDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDVLNDDLYYIFGFLVERLDEG

Query:  GMAM-IHFLCLRRVQGLGFL
          A+ +  +   R++G  F+
Subjt:  GMAM-IHFLCLRRVQGLGFL

XP_038903908.1 U11/U12 small nuclear ribonucleoprotein 65 kDa protein [Benincasa hispida]1.7e-14586.88Show/hide
Query:  MEDAATKDAISKDHRSKYYTEGMRARPLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
        MEDAA KDAISKDHRSK +TE MRARPLHFGEPIAARLGVDYPFPPHL YAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
Subjt:  MEDAATKDAISKDHRSKYYTEGMRARPLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP

Query:  PCIPAPPSPSLTLPPLPPLATPRPQVTNMSSDESEMESSEEDVEGKYNSSGVTKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
        P IPA PS    LPPLPP ATPRPQVTNMSSDESEMESSEEDV+GKYNSSGV+KTAKSG+KRSRCETIVGPGIDK+VAHEAVGVKPSTLVPKEIPMIKKK
Subjt:  PCIPAPPSPSLTLPPLPPLATPRPQVTNMSSDESEMESSEEDVEGKYNSSGVTKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK

Query:  NPVIQIRIAPKVIHDGKVNNINNDGEEREKEANDLKPYATLEDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDVLNDDLYYIFGFLVERLDEG
        NPVIQIRIAPKVIHDGKV+NINND EE EKEANDLKPYATLEDLERGKLPPEEILSLPMFKNYT G+PTSVLYIKNLAKDVLNDDLYYIFG L E +DE 
Subjt:  NPVIQIRIAPKVIHDGKVNNINNDGEEREKEANDLKPYATLEDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDVLNDDLYYIFGFLVERLDEG

Query:  GMAM-IHFLCLRRVQGLGFL
          A+ +  +   R++G  F+
Subjt:  GMAM-IHFLCLRRVQGLGFL

TrEMBL top hitse value%identityAlignment
A0A0A0KCT1 RRM domain-containing protein9.5e-14786.88Show/hide
Query:  MEDAATKDAISKDHRSKYYTEGMRARPLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
        ME AA KDAISKDH S+ +TEGMRARPLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
Subjt:  MEDAATKDAISKDHRSKYYTEGMRARPLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP

Query:  PCIPAPPSPSLTLPPLPPLATPRPQVTNMSSDESEMESSEEDVEGKYNSSGVTKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
        P IPAPPSPSLTLPPLPP  T R QVTNM SDESEMESSEEDVEGKYN SGV+KTAKSG KR RCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
Subjt:  PCIPAPPSPSLTLPPLPPLATPRPQVTNMSSDESEMESSEEDVEGKYNSSGVTKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK

Query:  NPVIQIRIAPKVIHDGKVNNINNDGEEREKEANDLKPYATLEDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDVLNDDLYYIFGFLVERLDEG
        NPVIQIRIAPKVIHDGKV NINNDGEE EKEA+DLKPYATLEDLERGKLPPEEILSLPMFKNYT G+PTSVLYIKNLAKDVLNDDLYYIFG L E +DE 
Subjt:  NPVIQIRIAPKVIHDGKVNNINNDGEEREKEANDLKPYATLEDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDVLNDDLYYIFGFLVERLDEG

Query:  GMAM-IHFLCLRRVQGLGFL
          A+ +  +   R++G  F+
Subjt:  GMAM-IHFLCLRRVQGLGFL

A0A1S3BIH7 U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X11.4e-14586.56Show/hide
Query:  MEDAATKDAISKDHRSKYYTEGMRARPLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
        MEDAA K AISKDH S+ +TEGMRARPLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
Subjt:  MEDAATKDAISKDHRSKYYTEGMRARPLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP

Query:  PCIPAPPSPSLTLPPLPPLATPRPQVTNMSSDESEMESSEEDVEGKYNSSGVTKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
        P  PAPPSPSLTLPPLPP AT R QVTNM SDESEMESSEEDVEGKYNSSGV+KTAKSG KR RCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
Subjt:  PCIPAPPSPSLTLPPLPPLATPRPQVTNMSSDESEMESSEEDVEGKYNSSGVTKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK

Query:  NPVIQIRIAPKVIHDGKVNNINNDGEEREKEANDLKPYATLEDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDVLNDDLYYIFGFLVERLDEG
        NPVIQIRIAPKVIHDGKV+  NNDGE  EKEA+DLKPYATLEDLERGKLPPEEILSLPMFKNYT GSPTSVLYIKNLAKDVLNDDLYYIFG L E +DE 
Subjt:  NPVIQIRIAPKVIHDGKVNNINNDGEEREKEANDLKPYATLEDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDVLNDDLYYIFGFLVERLDEG

Query:  GMAM-IHFLCLRRVQGLGFL
          A+ +  +   R++G  F+
Subjt:  GMAM-IHFLCLRRVQGLGFL

A0A1S3BJ40 U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X43.7e-14392.44Show/hide
Query:  MEDAATKDAISKDHRSKYYTEGMRARPLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
        MEDAA K AISKDH S+ +TEGMRARPLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
Subjt:  MEDAATKDAISKDHRSKYYTEGMRARPLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP

Query:  PCIPAPPSPSLTLPPLPPLATPRPQVTNMSSDESEMESSEEDVEGKYNSSGVTKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
        P  PAPPSPSLTLPPLPP AT R QVTNM SDESEMESSEEDVEGKYNSSGV+KTAKSG KR RCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
Subjt:  PCIPAPPSPSLTLPPLPPLATPRPQVTNMSSDESEMESSEEDVEGKYNSSGVTKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK

Query:  NPVIQIRIAPKVIHDGKVNNINNDGEEREKEANDLKPYATLEDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDVLNDDLYYIFG
        NPVIQIRIAPKVIHDGKV+  NNDGE  EKEA+DLKPYATLEDLERGKLPPEEILSLPMFKNYT GSPTSVLYIKNLAKDVLNDDLYYIFG
Subjt:  NPVIQIRIAPKVIHDGKVNNINNDGEEREKEANDLKPYATLEDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDVLNDDLYYIFG

A0A1S3BJY8 U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X21.4e-14586.56Show/hide
Query:  MEDAATKDAISKDHRSKYYTEGMRARPLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
        MEDAA K AISKDH S+ +TEGMRARPLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
Subjt:  MEDAATKDAISKDHRSKYYTEGMRARPLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP

Query:  PCIPAPPSPSLTLPPLPPLATPRPQVTNMSSDESEMESSEEDVEGKYNSSGVTKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
        P  PAPPSPSLTLPPLPP AT R QVTNM SDESEMESSEEDVEGKYNSSGV+KTAKSG KR RCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
Subjt:  PCIPAPPSPSLTLPPLPPLATPRPQVTNMSSDESEMESSEEDVEGKYNSSGVTKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK

Query:  NPVIQIRIAPKVIHDGKVNNINNDGEEREKEANDLKPYATLEDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDVLNDDLYYIFGFLVERLDEG
        NPVIQIRIAPKVIHDGKV+  NNDGE  EKEA+DLKPYATLEDLERGKLPPEEILSLPMFKNYT GSPTSVLYIKNLAKDVLNDDLYYIFG L E +DE 
Subjt:  NPVIQIRIAPKVIHDGKVNNINNDGEEREKEANDLKPYATLEDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDVLNDDLYYIFGFLVERLDEG

Query:  GMAM-IHFLCLRRVQGLGFL
          A+ +  +   R++G  F+
Subjt:  GMAM-IHFLCLRRVQGLGFL

A0A1S4DX29 U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X82.2e-14391.81Show/hide
Query:  MEDAATKDAISKDHRSKYYTEGMRARPLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
        MEDAA K AISKDH S+ +TEGMRARPLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP
Subjt:  MEDAATKDAISKDHRSKYYTEGMRARPLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLP

Query:  PCIPAPPSPSLTLPPLPPLATPRPQVTNMSSDESEMESSEEDVEGKYNSSGVTKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
        P  PAPPSPSLTLPPLPP AT R QVTNM SDESEMESSEEDVEGKYNSSGV+KTAKSG KR RCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK
Subjt:  PCIPAPPSPSLTLPPLPPLATPRPQVTNMSSDESEMESSEEDVEGKYNSSGVTKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKK

Query:  NPVIQIRIAPKVIHDGKVNNINNDGEEREKEANDLKPYATLEDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDVLNDDLYYIFGFL
        NPVIQIRIAPKVIHDGKV+  NNDGE  EKEA+DLKPYATLEDLERGKLPPEEILSLPMFKNYT GSPTSVLYIKNLAKDVLNDDLYYIFG++
Subjt:  NPVIQIRIAPKVIHDGKVNNINNDGEEREKEANDLKPYATLEDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDVLNDDLYYIFGFL

SwissProt top hitse value%identityAlignment
F1Q8J0 RNA-binding region-containing protein 36.3e-2331.93Show/hide
Query:  IAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLPPCIPAPPSPSLTLPPLPPLATPRPQVTNM-SSD
        IA  LG+ +   P L+Y YPPP   ILTNI + L++VP+FY QVLHLMNKMN+P+PFR P+  PP    +P+ P P    PP PP   P P+     S +
Subjt:  IAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLPPCIPAPPSPSLTLPPLPPLATPRPQVTNM-SSD

Query:  ESEMES-SEEDVEGKYNSSGV----------TKTAKSGNKRSRCETIVGPGIDK-----------DVAHE--AVGVKPSTL-VPKEIPMI----------
        ESE ES  EE+ E      G+          TKT+    K    + +  P  D            DV  +  A+G K     +  E+  I          
Subjt:  ESEMES-SEEDVEGKYNSSGV----------TKTAKSGNKRSRCETIVGPGIDK-----------DVAHE--AVGVKPSTL-VPKEIPMI----------

Query:  -----KKKNPVIQIRIAPKVIHDGKV---NNINNDGEEREKEANDLKPYATLEDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDVLNDDLYYI
              +  P +++         GK+     +    EE+E++ +    + +  +LERG+L  +EI  L +FK Y  G PT  LY+KN+AK V   DL +I
Subjt:  -----KKKNPVIQIRIAPKVIHDGKV---NNINNDGEEREKEANDLKPYATLEDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDVLNDDLYYI

Query:  FGFLVERLDEGGMAMIHFLCLR--RVQGLGFL
        +G  ++   E    M   + ++  R++G  F+
Subjt:  FGFLVERLDEGGMAMIHFLCLR--RVQGLGFL

Q4G055 RNA-binding region-containing protein 31.3e-2030Show/hide
Query:  IAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTP-----------PLPPCIPAPPSPSLTLPPLPPLATP
        IA   G+ +P    L+Y YPPP   IL NIVNAL +VP+FY QVLHLMNKMN+P PF      P           PLPP  P PP      PPLP     
Subjt:  IAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTP-----------PLPPCIPAPPSPSLTLPPLPPLATP

Query:  RPQVTNMSSDESEMESSEEDVEGKYNS-----------SGVTKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPVIQIRIAPK
          +  ++SS ESE ESS+E+   + N                K      KR   + +  P       H    + PS +  +  P+  KK         P 
Subjt:  RPQVTNMSSDESEMESSEEDVEGKYNS-----------SGVTKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPVIQIRIAPK

Query:  VIHDGKVNNINNDGE----------------------------EREKEANDLKP--YATLEDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDV
         ++       NN+ +                            E  KE +D  P  + +  +LE+G++  EE+ +L +F++Y  G P   +Y+KNLA+ V
Subjt:  VIHDGKVNNINNDGE----------------------------EREKEANDLKP--YATLEDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDV

Query:  LNDDLYYIFGFLVERLDEGGMAMIHFLCLR--RVQGLGFL
           DL +IFG  V+   E    M     ++  R++G  F+
Subjt:  LNDDLYYIFGFLVERLDEGGMAMIHFLCLR--RVQGLGFL

Q5R6C7 RNA-binding region-containing protein 31.3e-2031.74Show/hide
Query:  IAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPF-----RLPLPTPPLPPCIPAPPSPSLTLPPLPPLATPRPQV-T
        IA   G+ +P    L+Y YPPP   IL NIVNAL +VP+FY QVLHLMNKMN+P PF     R P+    +P   P PP+      P PP   P P+   
Subjt:  IAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPF-----RLPLPTPPLPPCIPAPPSPSLTLPPLPPLATPRPQV-T

Query:  NMSSDESEMESSEEDVEGKYN--------SSGVTKTAKSGNKRSR------CETIVGPGID---------------KDVAHEAVGVKPSTLVP-------
         +SS+ESE ES++++   + N             KT K  + R +        T + P                  + V ++ +    ST +P       
Subjt:  NMSSDESEMESSEEDVEGKYN--------SSGVTKTAKSGNKRSR------CETIVGPGID---------------KDVAHEAVGVKPSTLVP-------

Query:  -KEIPMIKKKNPVIQIRIAPKVIHDGKV-NNINNDGEEREKEANDLKPYATL--EDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDVLNDDLY
         KE    +K + +    +    I  GK+    N D  E  KE +D  P   +   +LE+G++  EE+ +L +F++Y  G P   +Y+KNLAK V   DL 
Subjt:  -KEIPMIKKKNPVIQIRIAPKVIHDGKV-NNINNDGEEREKEANDLKPYATL--EDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDVLNDDLY

Query:  YIFGFLVERLDEGGMAMIHFLCLR--RVQGLGFL
        YIFG  V+   E    M     ++  R++G  F+
Subjt:  YIFGFLVERLDEGGMAMIHFLCLR--RVQGLGFL

Q8RWV8 U11/U12 small nuclear ribonucleoprotein 65 kDa protein2.5e-7254.61Show/hide
Query:  GEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLPPCIPAPPSPSLTLPPLPPLATPRPQVTNMS
        GEPIA +LG+DYPFPPHL+YAYPPPD NIL NI NALIAVP  YTQVLHLMNKMN+P PFRL LPTPPLP   P                  +  + + S
Subjt:  GEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLPPCIPAPPSPSLTLPPLPPLATPRPQVTNMS

Query:  SDESEMESSEEDVEGKYNSSGVTKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPVIQIRIAPKVIHDG-KVNNINND--GEE
        S ESEMES E+             T+KSG KR+R   +VG G+DKDV HE VGVKPS+L PKEIP I+K   V+QI+I  KV  D  K  + N D   E 
Subjt:  SDESEMESSEEDVEGKYNSSGVTKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPVIQIRIAPKVIHDG-KVNNINND--GEE

Query:  REKEANDLKPYATLEDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDVLNDDLYYIFGFLVERLDEGGMAM-IHFLCLRRVQGLGFL
        +EK++N LKP+A+LE+LE+G+LPP++ILSLPMFKNYT G+P+ VLYIKNLAKDV+ DD YYIFG   E  +    ++ +  +   R++G  FL
Subjt:  REKEANDLKPYATLEDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDVLNDDLYYIFGFLVERLDEGGMAM-IHFLCLRRVQGLGFL

Q96LT9 RNA-binding region-containing protein 33.5e-2131.76Show/hide
Query:  IAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPF------------RLPLPTPPLPPCIPAPPSPSLTLPPLPPLAT
        IA   G+ +P    L+Y YPPP   IL NIVNAL +VP+FY QVLHLMNKMN+P PF             +PL   PLPP  P PP      PPLP    
Subjt:  IAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPF------------RLPLPTPPLPPCIPAPPSPSLTLPPLPPLAT

Query:  PRPQVTNMSSDESEMESSEEDVEGKYN--------SSGVTKTAKSGNKRSR------CETIVGPGID---------------KDVAHEAVGVKPSTLVP-
           +   +SS+ESE ES++++   + N             KT K  + R +        T + P                  + V ++ +    ST +P 
Subjt:  PRPQVTNMSSDESEMESSEEDVEGKYN--------SSGVTKTAKSGNKRSR------CETIVGPGID---------------KDVAHEAVGVKPSTLVP-

Query:  -------KEIPMIKKKNPVIQIRIAPKVIHDGKV-NNINNDGEEREKEANDLKPYATL--EDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDV
               KE    +K + +    +    I  GK+    N D  E  KE +D  P   +   +LE+G++  EE+ +L +F++Y  G P   +Y+KNLAK V
Subjt:  -------KEIPMIKKKNPVIQIRIAPKVIHDGKV-NNINNDGEEREKEANDLKPYATL--EDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDV

Query:  LNDDLYYIFGFLVERLDEGGMAMIHFLCLR--RVQGLGFL
           DL YIFG  V+   E    M     ++  R++G  F+
Subjt:  LNDDLYYIFGFLVERLDEGGMAMIHFLCLR--RVQGLGFL

Arabidopsis top hitse value%identityAlignment
AT1G09230.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.8e-7354.61Show/hide
Query:  GEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLPPCIPAPPSPSLTLPPLPPLATPRPQVTNMS
        GEPIA +LG+DYPFPPHL+YAYPPPD NIL NI NALIAVP  YTQVLHLMNKMN+P PFRL LPTPPLP   P                  +  + + S
Subjt:  GEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLPPCIPAPPSPSLTLPPLPPLATPRPQVTNMS

Query:  SDESEMESSEEDVEGKYNSSGVTKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPVIQIRIAPKVIHDG-KVNNINND--GEE
        S ESEMES E+             T+KSG KR+R   +VG G+DKDV HE VGVKPS+L PKEIP I+K   V+QI+I  KV  D  K  + N D   E 
Subjt:  SDESEMESSEEDVEGKYNSSGVTKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPVIQIRIAPKVIHDG-KVNNINND--GEE

Query:  REKEANDLKPYATLEDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDVLNDDLYYIFGFLVERLDEGGMAM-IHFLCLRRVQGLGFL
        +EK++N LKP+A+LE+LE+G+LPP++ILSLPMFKNYT G+P+ VLYIKNLAKDV+ DD YYIFG   E  +    ++ +  +   R++G  FL
Subjt:  REKEANDLKPYATLEDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDVLNDDLYYIFGFLVERLDEGGMAM-IHFLCLRRVQGLGFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATGCTGCCACAAAAGATGCCATATCTAAGGACCATAGGAGTAAATATTATACTGAGGGTATGAGAGCTAGGCCTCTGCATTTTGGTGAGCCAATTGCTGCAAG
GCTTGGTGTGGACTATCCATTCCCTCCTCATCTTGAGTATGCTTATCCTCCACCAGATGGTAATATCCTGACCAACATTGTTAATGCCCTCATAGCTGTCCCTCGCTTCT
ATACTCAGGTGCTGCATTTAATGAACAAGATGAACATTCCAGCTCCATTCCGATTGCCTCTACCCACTCCACCTCTCCCACCTTGCATTCCTGCACCACCATCACCATCA
TTAACGCTGCCACCTCTTCCTCCTCTTGCCACTCCAAGGCCTCAAGTAACAAATATGTCCAGTGATGAGTCAGAAATGGAGTCCTCAGAAGAGGATGTGGAAGGAAAATA
TAATTCAAGTGGGGTTACAAAAACTGCAAAATCAGGAAACAAGCGTTCTAGGTGTGAAACGATTGTAGGCCCTGGGATAGACAAAGATGTGGCTCATGAGGCTGTTGGGG
TGAAACCTTCCACATTGGTTCCGAAAGAGATTCCTATGATAAAAAAGAAAAACCCAGTGATTCAGATTAGAATTGCCCCTAAAGTGATTCACGATGGAAAAGTCAATAAC
ATTAATAATGATGGTGAAGAGAGAGAAAAGGAAGCAAATGATCTTAAGCCCTATGCAACACTCGAAGATTTAGAGAGAGGAAAATTGCCTCCAGAAGAAATTCTTTCACT
TCCAATGTTCAAGAACTATACTACTGGGAGTCCTACTTCGGTGCTGTATATCAAGAACTTAGCCAAAGATGTATTGAATGATGACCTCTACTATATTTTTGGTTTTCTTG
TTGAAAGGTTGGATGAGGGCGGAATGGCCATGATACATTTTCTGTGCCTGCGGAGAGTTCAAGGGCTGGGTTTTCTTGTTGATATAGTATGGCAGGCATACAGAAAGCAG
TGGAACTCCTTACTCAAGAAAGAGGTAAAACTAATACAGCCAACATTCAAGAACAAAACCTTAACTCTCAATGCGTCCATGAACATATTACCAATCAACGCAGAGAACAA
GAATGAGCAGCTGTACCTCAAATGCTGCAAGAAAGAGGAAATCCTAGACATCCAAGATTCCAAGAAACACAAAGAACCCAAGAGAGAGGCAGAACCACCTCGAACCTCAA
GTTGGTTTCGATCGAAGAGGCCAATTTGGGTTGAATTTACAAAATCCTGTACAAGGCCACCGATTCTTGCATCAAAGACCTCTTCCCCACAATGTAGTTGGCTTGGATTC
AGACTCTTTGGATCCTCGGCTCAAATATAA
mRNA sequenceShow/hide mRNA sequence
AAAAATTAACACCACCAACTACTTCTCCCTCCGTAAGAGAAAAAACCTTCCTCTCCCTGCTCCCTTCTCGCGGTCGTGGTTGAACCACTGGCCTGCCCACCCCTGAATTT
CCTGCCAATCTCGCTCACTCTCAGCTCGCCTATACGATTCTCTCTCTCTCTCACACACACACAGCAAAATCTTCATTGGACAACTCGAGAAGCGCTCCTCTCTAACCCCA
CTTCTCTTTTTCGATCCTCCCTGTAGTCTGTCACTCGTTGGCTGCTTCAAGGCTGAAGCTTCTTGGTGAACTTTTAGCAGAGGGAAGGGCTACTAGACAAATTTAATAGT
ATAAATCTAAAGAGTGTATCTGTGTCCAGGAGGGATTTTGTGTTATCCTCATCTTTTCAGATGGAGGATGCTGCCACAAAAGATGCCATATCTAAGGACCATAGGAGTAA
ATATTATACTGAGGGTATGAGAGCTAGGCCTCTGCATTTTGGTGAGCCAATTGCTGCAAGGCTTGGTGTGGACTATCCATTCCCTCCTCATCTTGAGTATGCTTATCCTC
CACCAGATGGTAATATCCTGACCAACATTGTTAATGCCCTCATAGCTGTCCCTCGCTTCTATACTCAGGTGCTGCATTTAATGAACAAGATGAACATTCCAGCTCCATTC
CGATTGCCTCTACCCACTCCACCTCTCCCACCTTGCATTCCTGCACCACCATCACCATCATTAACGCTGCCACCTCTTCCTCCTCTTGCCACTCCAAGGCCTCAAGTAAC
AAATATGTCCAGTGATGAGTCAGAAATGGAGTCCTCAGAAGAGGATGTGGAAGGAAAATATAATTCAAGTGGGGTTACAAAAACTGCAAAATCAGGAAACAAGCGTTCTA
GGTGTGAAACGATTGTAGGCCCTGGGATAGACAAAGATGTGGCTCATGAGGCTGTTGGGGTGAAACCTTCCACATTGGTTCCGAAAGAGATTCCTATGATAAAAAAGAAA
AACCCAGTGATTCAGATTAGAATTGCCCCTAAAGTGATTCACGATGGAAAAGTCAATAACATTAATAATGATGGTGAAGAGAGAGAAAAGGAAGCAAATGATCTTAAGCC
CTATGCAACACTCGAAGATTTAGAGAGAGGAAAATTGCCTCCAGAAGAAATTCTTTCACTTCCAATGTTCAAGAACTATACTACTGGGAGTCCTACTTCGGTGCTGTATA
TCAAGAACTTAGCCAAAGATGTATTGAATGATGACCTCTACTATATTTTTGGTTTTCTTGTTGAAAGGTTGGATGAGGGCGGAATGGCCATGATACATTTTCTGTGCCTG
CGGAGAGTTCAAGGGCTGGGTTTTCTTGTTGATATAGTATGGCAGGCATACAGAAAGCAGTGGAACTCCTTACTCAAGAAAGAGGTAAAACTAATACAGCCAACATTCAA
GAACAAAACCTTAACTCTCAATGCGTCCATGAACATATTACCAATCAACGCAGAGAACAAGAATGAGCAGCTGTACCTCAAATGCTGCAAGAAAGAGGAAATCCTAGACA
TCCAAGATTCCAAGAAACACAAAGAACCCAAGAGAGAGGCAGAACCACCTCGAACCTCAAGTTGGTTTCGATCGAAGAGGCCAATTTGGGTTGAATTTACAAAATCCTGT
ACAAGGCCACCGATTCTTGCATCAAAGACCTCTTCCCCACAATGTAGTTGGCTTGGATTCAGACTCTTTGGATCCTCGGCTCAAATATAA
Protein sequenceShow/hide protein sequence
MEDAATKDAISKDHRSKYYTEGMRARPLHFGEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLPPCIPAPPSPS
LTLPPLPPLATPRPQVTNMSSDESEMESSEEDVEGKYNSSGVTKTAKSGNKRSRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPVIQIRIAPKVIHDGKVNN
INNDGEEREKEANDLKPYATLEDLERGKLPPEEILSLPMFKNYTTGSPTSVLYIKNLAKDVLNDDLYYIFGFLVERLDEGGMAMIHFLCLRRVQGLGFLVDIVWQAYRKQ
WNSLLKKEVKLIQPTFKNKTLTLNASMNILPINAENKNEQLYLKCCKKEEILDIQDSKKHKEPKREAEPPRTSSWFRSKRPIWVEFTKSCTRPPILASKTSSPQCSWLGF
RLFGSSAQI