; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G10660 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G10660
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionReverse transcriptase
Genome locationClcChr02:16577206..16580570
RNA-Seq ExpressionClc02G10660
SyntenyClc02G10660
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR021109 - Aspartic peptidase domain superfamily
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036813.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.3e-10945.54Show/hide
Query:  PRGRRAKEAVAETSEA---TGYHGDMSEGESSHPQVKVNVEEQRFTRIAQRLAASIGSVESDPEKKYSIERLKALRATPFEGTVDPVEAEVWLDLLEKCY
        PRG+  K   AE S A          S+ ESS P+V+ NVEEQ   R+AQRL + I S +SDPEKKY  ERLKAL AT F GT +P + E WL L+EKC+
Subjt:  PRGRRAKEAVAETSEA---TGYHGDMSEGESSHPQVKVNVEEQRFTRIAQRLAASIGSVESDPEKKYSIERLKALRATPFEGTVDPVEAEVWLDLLEKCY

Query:  R-----------------------------------GSMTVAEYEKKYTKLSKYATTIIADETDRCKRFEEGLREEIRTSVTASVEWTDFSRLVEAAMQV
        R                                   G+MTVAEYEKKYT+LSKYAT +I DE +RCKRFEEGLREEIRT VTA  +W DFS+LVE A++V
Subjt:  R-----------------------------------GSMTVAEYEKKYTKLSKYATTIIADETDRCKRFEEGLREEIRTSVTASVEWTDFSRLVEAAMQV

Query:  ERSLMEKRMERDSSKSGRVVHSS--GVTPG-QSGMRFVPGVFKGGYFKTRLSGQTTFKTSTSGGTRRQGPKNFGGPAQSVEGSRSGQPGESTASSTQKPL
        E+SL E++ ER++SK+ R   SS     PG +   RFVP V   G FK++ SG +  K+ + GG +R    +      S  GS   +     + S +   
Subjt:  ERSLMEKRMERDSSKSGRVVHSS--GVTPG-QSGMRFVPGVFKGGYFKTRLSGQTTFKTSTSGGTRRQGPKNFGGPAQSVEGSRSGQPGESTASSTQKPL

Query:  CPTCGKYHWGQCRVNACYNCGQTGHFKRECPQLMQEDKPEQRTASHVVGQPQRSAGNVDEGTSRTSQKGDTGRSRQQGKIFAMTQQEADDAPNVVTGTLS
                      + CYNC Q GH++R+CP L+       +T S  V Q  R+ G   EG+S   QKG  GRSRQ+GK+FAMTQQEA DAPN+VTGT S
Subjt:  CPTCGKYHWGQCRVNACYNCGQTGHFKRECPQLMQEDKPEQRTASHVVGQPQRSAGNVDEGTSRTSQKGDTGRSRQQGKIFAMTQQEADDAPNVVTGTLS

Query:  ICNTSAHVLIDPGATHSFIAKMFAVKVNSTVESLPEELSVYTPVGDVLVASEVYKDCMIEMDGVAMTANLIPLDIPEFDVTLGMDFLSKYRATMDCFQKE
        I N SAHVL+DP                                GD  + + VY+ C I +DG  +  +LIPL+I EFDV LGMDFLS + A+++C QKE
Subjt:  ICNTSAHVLIDPGATHSFIAKMFAVKVNSTVESLPEELSVYTPVGDVLVASEVYKDCMIEMDGVAMTANLIPLDIPEFDVTLGMDFLSKYRATMDCFQKE

Query:  VVFKRFEGTEVIFRRDRKILPTCVISAVKARKLLSKGCSAYLAYVIDAQ
        +VFKR   +E+IFR +RKILPT VISA+KA KLL KGC+AYLA+V+D Q
Subjt:  VVFKRFEGTEVIFRRDRKILPTCVISAVKARKLLSKGCSAYLAYVIDAQ

KAA0037581.1 reverse transcriptase [Cucumis melo var. makuwa]2.2e-10544.66Show/hide
Query:  SDPEKKYSIERLKALRATPFEGTVDPVEAEVWLDLLEKC--------------------------------------------YRG--------------
        SD EK Y IERLK L AT FEG+ DP +AEVWL++LEKC                                            +RG              
Subjt:  SDPEKKYSIERLKALRATPFEGTVDPVEAEVWLDLLEKC--------------------------------------------YRG--------------

Query:  -----------SMTVAEYEKKYTKLSKYATTIIADETDRCKRFEEGLREEIRTSVTASVEWTDFSRLVEAAMQVERSLMEKRMERDSSKSGRVVHSSGVT
                   S++VA+YE+KYT+LS+YA  I+A E+DRC RFE GLR EIRT VTA  +W +FS+LVE A++V++S++E++   + S+   V  +SG+ 
Subjt:  -----------SMTVAEYEKKYTKLSKYATTIIADETDRCKRFEEGLREEIRTSVTASVEWTDFSRLVEAAMQVERSLMEKRMERDSSKSGRVVHSSGVT

Query:  PGQSGMRFVPGVFKGGY--FKTRLSGQTTFKTSTSGGTRRQGPKNFGGPAQSVEGSRSGQPGESTASSTQKPLCPTCGKYHWGQCRVNA--CYNCGQTGH
         G+   RF PGV   G   FK R  G+   + S+    +RQ  +    PA SV  SR+GQ  ES AS +++  C +CGK H G+C + A  CY CG+TGH
Subjt:  PGQSGMRFVPGVFKGGY--FKTRLSGQTTFKTSTSGGTRRQGPKNFGGPAQSVEGSRSGQPGESTASSTQKPLCPTCGKYHWGQCRVNA--CYNCGQTGH

Query:  FKRECPQLMQEDKPEQRTASHVVGQPQRSAGNVDEGTSRTSQKGDTGRSRQQGKIFAMTQQEADDAPNVVTGTLSICNTSAHVLIDPGATHSFIAKMFAV
        FKR+CPQL    + +Q   SH V Q + S     E TS   QKG  GR RQQGK++AMTQQEA+DAP+V+T T+ ICN    VL+D GATHSF++ MF  
Subjt:  FKRECPQLMQEDKPEQRTASHVVGQPQRSAGNVDEGTSRTSQKGDTGRSRQQGKIFAMTQQEADDAPNVVTGTLSICNTSAHVLIDPGATHSFIAKMFAV

Query:  KVNSTVESLPEELSVYTPVGDVLVASEVYKDCMIEMDGVAMTANLIPLDIPEFDVTLGMDFLSKYRATMDCFQKEVVFKRFEGTEVIFRRDRKILPTCVI
        K+N  +E LPEEL + TPVGDVL+ SEV  DC + ++G+ M+ +L+PL++   DV LGMDFL  + A+M+C +KEV FK+   TEVIF+ +R I+PT +I
Subjt:  KVNSTVESLPEELSVYTPVGDVLVASEVYKDCMIEMDGVAMTANLIPLDIPEFDVTLGMDFLSKYRATMDCFQKEVVFKRFEGTEVIFRRDRKILPTCVI

Query:  SAVKARKLLSKGCSAYLAYVIDAQ
        SA+KA KLL KGC+A+LA+V++ Q
Subjt:  SAVKARKLLSKGCSAYLAYVIDAQ

KAA0066849.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.2e-10540.59Show/hide
Query:  MPPR-GRRAKEAVAETSEATGYHGDMSEGESSHPQVKVNVEEQRFTRIAQRLAASIGSVESDPEKKYSIERLKALRATPFEGTVDPVEAEVWLDLLEKCY
        MPPR GRR ++         G     S GESS   V+     ++F R  Q +  +  +  SDPEK Y IERLK L AT FEG+ DP +AE WL++LEKC+
Subjt:  MPPR-GRRAKEAVAETSEATGYHGDMSEGESSHPQVKVNVEEQRFTRIAQRLAASIGSVESDPEKKYSIERLKALRATPFEGTVDPVEAEVWLDLLEKCY

Query:  ---------------------------------------------------------------------RGSMTVAEYEKKYTKLSKYATTIIADETDRC
                                                                             +GS++VAEYE+KYT+LS+YA  IIA E+DRC
Subjt:  ---------------------------------------------------------------------RGSMTVAEYEKKYTKLSKYATTIIADETDRC

Query:  KRFEEGLREEIRTSVTASVEWTDFSRLVEAAMQVERSLMEKRMERDSSKSGRVVHSSGVTPGQSGMRFVPGVFKGGY--FKTRLSGQTTFKTSTSGGTRR
        +RFE GLR EIRT VTA  +WT+FS+LVE A++VE+S+ E   E+ + +  R   ++    G+   RF PG+       FK R  GQ +   S     +R
Subjt:  KRFEEGLREEIRTSVTASVEWTDFSRLVEAAMQVERSLMEKRMERDSSKSGRVVHSSGVTPGQSGMRFVPGVFKGGY--FKTRLSGQTTFKTSTSGGTRR

Query:  QGPKNFGGPAQSVEGSRSGQPG-ESTASSTQKPLCPTCGKYHWGQCRVNA--CYNCGQTGHFKRECPQLMQEDKPEQRTASHVVGQPQRSAGNVDEGTSR
        Q  +    P+Q +  +   QPG ES AS+ ++  C +CG+ H GQC V A  CY CGQ GHFK++CPQL    + +Q   S  + Q + S     EGTS 
Subjt:  QGPKNFGGPAQSVEGSRSGQPG-ESTASSTQKPLCPTCGKYHWGQCRVNA--CYNCGQTGHFKRECPQLMQEDKPEQRTASHVVGQPQRSAGNVDEGTSR

Query:  TSQKGDTGRSRQQGKIFAMTQQEADDAPNVVTGTLSICNTSAHVLIDPGATHSFIAKMFAVKVNSTVESLPEELSVYTPVGDVLVASEVYKDCMIEMDGV
          QKG  GR RQQGK++AMTQQE +DAP+V+TGT+ ICN  A VL DPGATHSF++ +F  K+N  +E L E L++YTPVGDVL+ +EV ++C + ++G+
Subjt:  TSQKGDTGRSRQQGKIFAMTQQEADDAPNVVTGTLSICNTSAHVLIDPGATHSFIAKMFAVKVNSTVESLPEELSVYTPVGDVLVASEVYKDCMIEMDGV

Query:  AMTANLIPLDIPEFDVTLGMDFLSKYRATMDCFQKEVVFKRFEGTEVIFRRDRKILPTCVISAVKARKLLSKGCSAYLAYVIDAQR---RGSTVPAPRRC
        ++  +L+PL++   DV LGMDFL  + A+MDC +KEVVF++    EV+FR  RK +   +IS +KA KLL KGC+A+LA+++  QR   +   VP  +  
Subjt:  AMTANLIPLDIPEFDVTLGMDFLSKYRATMDCFQKEVVFKRFEGTEVIFRRDRKILPTCVISAVKARKLLSKGCSAYLAYVIDAQR---RGSTVPAPRRC

Query:  LAFFKD
        L  F D
Subjt:  LAFFKD

TYK03091.1 reverse transcriptase [Cucumis melo var. makuwa]2.2e-10544.66Show/hide
Query:  SDPEKKYSIERLKALRATPFEGTVDPVEAEVWLDLLEKC--------------------------------------------YRG--------------
        SD EK Y IERLK L AT FEG+ DP +AEVWL++LEKC                                            +RG              
Subjt:  SDPEKKYSIERLKALRATPFEGTVDPVEAEVWLDLLEKC--------------------------------------------YRG--------------

Query:  -----------SMTVAEYEKKYTKLSKYATTIIADETDRCKRFEEGLREEIRTSVTASVEWTDFSRLVEAAMQVERSLMEKRMERDSSKSGRVVHSSGVT
                   S++VA+YE+KYT+LS+YA  I+A E+DRC RFE GLR EIRT VTA  +W +FS+LVE A++V++S++E++   + S+   V  +SG+ 
Subjt:  -----------SMTVAEYEKKYTKLSKYATTIIADETDRCKRFEEGLREEIRTSVTASVEWTDFSRLVEAAMQVERSLMEKRMERDSSKSGRVVHSSGVT

Query:  PGQSGMRFVPGVFKGGY--FKTRLSGQTTFKTSTSGGTRRQGPKNFGGPAQSVEGSRSGQPGESTASSTQKPLCPTCGKYHWGQCRVNA--CYNCGQTGH
         G+   RF PGV   G   FK R  G+   + S+    +RQ  +    PA SV  SR+GQ  ES AS +++  C +CGK H G+C + A  CY CG+TGH
Subjt:  PGQSGMRFVPGVFKGGY--FKTRLSGQTTFKTSTSGGTRRQGPKNFGGPAQSVEGSRSGQPGESTASSTQKPLCPTCGKYHWGQCRVNA--CYNCGQTGH

Query:  FKRECPQLMQEDKPEQRTASHVVGQPQRSAGNVDEGTSRTSQKGDTGRSRQQGKIFAMTQQEADDAPNVVTGTLSICNTSAHVLIDPGATHSFIAKMFAV
        FKR+CPQL    + +Q   SH V Q + S     E TS   QKG  GR RQQGK++AMTQQEA+DAP+V+T T+ ICN    VL+D GATHSF++ MF  
Subjt:  FKRECPQLMQEDKPEQRTASHVVGQPQRSAGNVDEGTSRTSQKGDTGRSRQQGKIFAMTQQEADDAPNVVTGTLSICNTSAHVLIDPGATHSFIAKMFAV

Query:  KVNSTVESLPEELSVYTPVGDVLVASEVYKDCMIEMDGVAMTANLIPLDIPEFDVTLGMDFLSKYRATMDCFQKEVVFKRFEGTEVIFRRDRKILPTCVI
        K+N  +E LPEEL + TPVGDVL+ SEV  DC + ++G+ M+ +L+PL++   DV LGMDFL  + A+M+C +KEV FK+   TEVIF+ +R I+PT +I
Subjt:  KVNSTVESLPEELSVYTPVGDVLVASEVYKDCMIEMDGVAMTANLIPLDIPEFDVTLGMDFLSKYRATMDCFQKEVVFKRFEGTEVIFRRDRKILPTCVI

Query:  SAVKARKLLSKGCSAYLAYVIDAQ
        SA+KA KLL KGC+A+LA+V++ Q
Subjt:  SAVKARKLLSKGCSAYLAYVIDAQ

TYK27290.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.3e-10542.06Show/hide
Query:  MPPRGRRAKEAVAETSEATGYHGDMSEGESSHPQVKVNVEEQRFTRIAQRLAASIGSVESDPEKKYSIERLKALRATPFEGTVDPVEAEVWLDLLEKCY-
        MPPR  R +    +  +  G     S GESS   V+     ++F R  Q +        SDPEK Y IERLK L AT FEG+ DP +AE WL++LEKC+ 
Subjt:  MPPRGRRAKEAVAETSEATGYHGDMSEGESSHPQVKVNVEEQRFTRIAQRLAASIGSVESDPEKKYSIERLKALRATPFEGTVDPVEAEVWLDLLEKCY-

Query:  ------------------------------------RGSMTVAEYEKKYTKLSKYATTIIADETDRCKRFEEGLREEIRTSVTASVEWTDFSRLVEAAMQ
                                            +GS++VAEYE+KYT+LS+YA  I+A E+DRC+RFE GL  EIRT +TA  +WT+FS+LVE A+ 
Subjt:  ------------------------------------RGSMTVAEYEKKYTKLSKYATTIIADETDRCKRFEEGLREEIRTSVTASVEWTDFSRLVEAAMQ

Query:  VERSLMEKRMERDSSKSGRVVHSSGVTPGQSGMRFVPGVFKGGY--FKTRLSGQTTFKTSTSGGTRRQGPKNFGGPAQSVEGSRSGQPG-ESTASSTQKP
        VE+S+ E   E+ + +  R   ++    G+   RF PG+       FK R  GQ +   S     +RQ  +    P+Q +  +   QPG ES AS+ ++ 
Subjt:  VERSLMEKRMERDSSKSGRVVHSSGVTPGQSGMRFVPGVFKGGY--FKTRLSGQTTFKTSTSGGTRRQGPKNFGGPAQSVEGSRSGQPG-ESTASSTQKP

Query:  LCPTCGKYHWGQCRVNA--CYNCGQTGHFKRECPQLMQEDKPEQRTASHVVGQPQRSAGNVDEGTSRTSQKGDTGRSRQQGKIFAMTQQEADDAPNVVTG
         C +CG+ H GQC V A  CY CGQ GHFK++CPQL    + +Q   S  + Q + S     EGTS   QKG  GR RQQGK++AMTQQE +DAP+V+TG
Subjt:  LCPTCGKYHWGQCRVNA--CYNCGQTGHFKRECPQLMQEDKPEQRTASHVVGQPQRSAGNVDEGTSRTSQKGDTGRSRQQGKIFAMTQQEADDAPNVVTG

Query:  TLSICNTSAHVLIDPGATHSFIAKMFAVKVNSTVESLPEELSVYTPVGDVLVASEVYKDCMIEMDGVAMTANLIPLDIPEFDVTLGMDFLSKYRATMDCF
        T+ ICN  A VL DPGATHSF++ +F  K+N  +E L E L++YTPVGDVL+ +EV ++C + ++G+++  +L+PL++   DV LGMDFL  + A+MDC 
Subjt:  TLSICNTSAHVLIDPGATHSFIAKMFAVKVNSTVESLPEELSVYTPVGDVLVASEVYKDCMIEMDGVAMTANLIPLDIPEFDVTLGMDFLSKYRATMDCF

Query:  QKEVVFKRFEGTEVIFRRDRKILPTCVISAVKARKLLSKGCSAYLAYVIDAQR---RGSTVPAPRRCLAFFKD
        +KEVVF++    EV+FR  RK +   +IS +KA KLL KGC+A+LA+++  QR   +   VP  +  L  F D
Subjt:  QKEVVFKRFEGTEVIFRRDRKILPTCVISAVKARKLLSKGCSAYLAYVIDAQR---RGSTVPAPRRCLAFFKD

TrEMBL top hitse value%identityAlignment
A0A5A7T1M0 Reverse transcriptase1.6e-10945.54Show/hide
Query:  PRGRRAKEAVAETSEA---TGYHGDMSEGESSHPQVKVNVEEQRFTRIAQRLAASIGSVESDPEKKYSIERLKALRATPFEGTVDPVEAEVWLDLLEKCY
        PRG+  K   AE S A          S+ ESS P+V+ NVEEQ   R+AQRL + I S +SDPEKKY  ERLKAL AT F GT +P + E WL L+EKC+
Subjt:  PRGRRAKEAVAETSEA---TGYHGDMSEGESSHPQVKVNVEEQRFTRIAQRLAASIGSVESDPEKKYSIERLKALRATPFEGTVDPVEAEVWLDLLEKCY

Query:  R-----------------------------------GSMTVAEYEKKYTKLSKYATTIIADETDRCKRFEEGLREEIRTSVTASVEWTDFSRLVEAAMQV
        R                                   G+MTVAEYEKKYT+LSKYAT +I DE +RCKRFEEGLREEIRT VTA  +W DFS+LVE A++V
Subjt:  R-----------------------------------GSMTVAEYEKKYTKLSKYATTIIADETDRCKRFEEGLREEIRTSVTASVEWTDFSRLVEAAMQV

Query:  ERSLMEKRMERDSSKSGRVVHSS--GVTPG-QSGMRFVPGVFKGGYFKTRLSGQTTFKTSTSGGTRRQGPKNFGGPAQSVEGSRSGQPGESTASSTQKPL
        E+SL E++ ER++SK+ R   SS     PG +   RFVP V   G FK++ SG +  K+ + GG +R    +      S  GS   +     + S +   
Subjt:  ERSLMEKRMERDSSKSGRVVHSS--GVTPG-QSGMRFVPGVFKGGYFKTRLSGQTTFKTSTSGGTRRQGPKNFGGPAQSVEGSRSGQPGESTASSTQKPL

Query:  CPTCGKYHWGQCRVNACYNCGQTGHFKRECPQLMQEDKPEQRTASHVVGQPQRSAGNVDEGTSRTSQKGDTGRSRQQGKIFAMTQQEADDAPNVVTGTLS
                      + CYNC Q GH++R+CP L+       +T S  V Q  R+ G   EG+S   QKG  GRSRQ+GK+FAMTQQEA DAPN+VTGT S
Subjt:  CPTCGKYHWGQCRVNACYNCGQTGHFKRECPQLMQEDKPEQRTASHVVGQPQRSAGNVDEGTSRTSQKGDTGRSRQQGKIFAMTQQEADDAPNVVTGTLS

Query:  ICNTSAHVLIDPGATHSFIAKMFAVKVNSTVESLPEELSVYTPVGDVLVASEVYKDCMIEMDGVAMTANLIPLDIPEFDVTLGMDFLSKYRATMDCFQKE
        I N SAHVL+DP                                GD  + + VY+ C I +DG  +  +LIPL+I EFDV LGMDFLS + A+++C QKE
Subjt:  ICNTSAHVLIDPGATHSFIAKMFAVKVNSTVESLPEELSVYTPVGDVLVASEVYKDCMIEMDGVAMTANLIPLDIPEFDVTLGMDFLSKYRATMDCFQKE

Query:  VVFKRFEGTEVIFRRDRKILPTCVISAVKARKLLSKGCSAYLAYVIDAQ
        +VFKR   +E+IFR +RKILPT VISA+KA KLL KGC+AYLA+V+D Q
Subjt:  VVFKRFEGTEVIFRRDRKILPTCVISAVKARKLLSKGCSAYLAYVIDAQ

A0A5A7U2V7 Reverse transcriptase1.1e-10540.59Show/hide
Query:  MPPR-GRRAKEAVAETSEATGYHGDMSEGESSHPQVKVNVEEQRFTRIAQRLAASIGSVESDPEKKYSIERLKALRATPFEGTVDPVEAEVWLDLLEKCY
        MPPR GRR ++         G     S GESS   V+     ++F R  Q +  +  +  SDPEK Y IERLK L AT FEG+ DP +AE WL++LEKC+
Subjt:  MPPR-GRRAKEAVAETSEATGYHGDMSEGESSHPQVKVNVEEQRFTRIAQRLAASIGSVESDPEKKYSIERLKALRATPFEGTVDPVEAEVWLDLLEKCY

Query:  ---------------------------------------------------------------------RGSMTVAEYEKKYTKLSKYATTIIADETDRC
                                                                             +GS++VAEYE+KYT+LS+YA  IIA E+DRC
Subjt:  ---------------------------------------------------------------------RGSMTVAEYEKKYTKLSKYATTIIADETDRC

Query:  KRFEEGLREEIRTSVTASVEWTDFSRLVEAAMQVERSLMEKRMERDSSKSGRVVHSSGVTPGQSGMRFVPGVFKGGY--FKTRLSGQTTFKTSTSGGTRR
        +RFE GLR EIRT VTA  +WT+FS+LVE A++VE+S+ E   E+ + +  R   ++    G+   RF PG+       FK R  GQ +   S     +R
Subjt:  KRFEEGLREEIRTSVTASVEWTDFSRLVEAAMQVERSLMEKRMERDSSKSGRVVHSSGVTPGQSGMRFVPGVFKGGY--FKTRLSGQTTFKTSTSGGTRR

Query:  QGPKNFGGPAQSVEGSRSGQPG-ESTASSTQKPLCPTCGKYHWGQCRVNA--CYNCGQTGHFKRECPQLMQEDKPEQRTASHVVGQPQRSAGNVDEGTSR
        Q  +    P+Q +  +   QPG ES AS+ ++  C +CG+ H GQC V A  CY CGQ GHFK++CPQL    + +Q   S  + Q + S     EGTS 
Subjt:  QGPKNFGGPAQSVEGSRSGQPG-ESTASSTQKPLCPTCGKYHWGQCRVNA--CYNCGQTGHFKRECPQLMQEDKPEQRTASHVVGQPQRSAGNVDEGTSR

Query:  TSQKGDTGRSRQQGKIFAMTQQEADDAPNVVTGTLSICNTSAHVLIDPGATHSFIAKMFAVKVNSTVESLPEELSVYTPVGDVLVASEVYKDCMIEMDGV
          QKG  GR RQQGK++AMTQQE +DAP+V+TGT+ ICN  A VL DPGATHSF++ +F  K+N  +E L E L++YTPVGDVL+ +EV ++C + ++G+
Subjt:  TSQKGDTGRSRQQGKIFAMTQQEADDAPNVVTGTLSICNTSAHVLIDPGATHSFIAKMFAVKVNSTVESLPEELSVYTPVGDVLVASEVYKDCMIEMDGV

Query:  AMTANLIPLDIPEFDVTLGMDFLSKYRATMDCFQKEVVFKRFEGTEVIFRRDRKILPTCVISAVKARKLLSKGCSAYLAYVIDAQR---RGSTVPAPRRC
        ++  +L+PL++   DV LGMDFL  + A+MDC +KEVVF++    EV+FR  RK +   +IS +KA KLL KGC+A+LA+++  QR   +   VP  +  
Subjt:  AMTANLIPLDIPEFDVTLGMDFLSKYRATMDCFQKEVVFKRFEGTEVIFRRDRKILPTCVISAVKARKLLSKGCSAYLAYVIDAQR---RGSTVPAPRRC

Query:  LAFFKD
        L  F D
Subjt:  LAFFKD

A0A5D3BHI1 Reverse transcriptase1.1e-10540.59Show/hide
Query:  MPPR-GRRAKEAVAETSEATGYHGDMSEGESSHPQVKVNVEEQRFTRIAQRLAASIGSVESDPEKKYSIERLKALRATPFEGTVDPVEAEVWLDLLEKCY
        MPPR GRR ++         G     S GESS   V+     ++F R  Q +  +  +  SDPEK Y IERLK L AT FEG+ DP +AE WL++LEKC+
Subjt:  MPPR-GRRAKEAVAETSEATGYHGDMSEGESSHPQVKVNVEEQRFTRIAQRLAASIGSVESDPEKKYSIERLKALRATPFEGTVDPVEAEVWLDLLEKCY

Query:  ---------------------------------------------------------------------RGSMTVAEYEKKYTKLSKYATTIIADETDRC
                                                                             +GS++VAEYE+KYT+LS+YA  IIA E+DRC
Subjt:  ---------------------------------------------------------------------RGSMTVAEYEKKYTKLSKYATTIIADETDRC

Query:  KRFEEGLREEIRTSVTASVEWTDFSRLVEAAMQVERSLMEKRMERDSSKSGRVVHSSGVTPGQSGMRFVPGVFKGGY--FKTRLSGQTTFKTSTSGGTRR
        +RFE GLR EIRT VTA  +WT+FS+LVE A++VE+S+ E   E+ + +  R   ++    G+   RF PG+       FK R  GQ +   S     +R
Subjt:  KRFEEGLREEIRTSVTASVEWTDFSRLVEAAMQVERSLMEKRMERDSSKSGRVVHSSGVTPGQSGMRFVPGVFKGGY--FKTRLSGQTTFKTSTSGGTRR

Query:  QGPKNFGGPAQSVEGSRSGQPG-ESTASSTQKPLCPTCGKYHWGQCRVNA--CYNCGQTGHFKRECPQLMQEDKPEQRTASHVVGQPQRSAGNVDEGTSR
        Q  +    P+Q +  +   QPG ES AS+ ++  C +CG+ H GQC V A  CY CGQ GHFK++CPQL    + +Q   S  + Q + S     EGTS 
Subjt:  QGPKNFGGPAQSVEGSRSGQPG-ESTASSTQKPLCPTCGKYHWGQCRVNA--CYNCGQTGHFKRECPQLMQEDKPEQRTASHVVGQPQRSAGNVDEGTSR

Query:  TSQKGDTGRSRQQGKIFAMTQQEADDAPNVVTGTLSICNTSAHVLIDPGATHSFIAKMFAVKVNSTVESLPEELSVYTPVGDVLVASEVYKDCMIEMDGV
          QKG  GR RQQGK++AMTQQE +DAP+V+TGT+ ICN  A VL DPGATHSF++ +F  K+N  +E L E L++YTPVGDVL+ +EV ++C + ++G+
Subjt:  TSQKGDTGRSRQQGKIFAMTQQEADDAPNVVTGTLSICNTSAHVLIDPGATHSFIAKMFAVKVNSTVESLPEELSVYTPVGDVLVASEVYKDCMIEMDGV

Query:  AMTANLIPLDIPEFDVTLGMDFLSKYRATMDCFQKEVVFKRFEGTEVIFRRDRKILPTCVISAVKARKLLSKGCSAYLAYVIDAQR---RGSTVPAPRRC
        ++  +L+PL++   DV LGMDFL  + A+MDC +KEVVF++    EV+FR  RK +   +IS +KA KLL KGC+A+LA+++  QR   +   VP  +  
Subjt:  AMTANLIPLDIPEFDVTLGMDFLSKYRATMDCFQKEVVFKRFEGTEVIFRRDRKILPTCVISAVKARKLLSKGCSAYLAYVIDAQR---RGSTVPAPRRC

Query:  LAFFKD
        L  F D
Subjt:  LAFFKD

A0A5D3BS67 Reverse transcriptase1.1e-10540.59Show/hide
Query:  MPPR-GRRAKEAVAETSEATGYHGDMSEGESSHPQVKVNVEEQRFTRIAQRLAASIGSVESDPEKKYSIERLKALRATPFEGTVDPVEAEVWLDLLEKCY
        MPPR GRR ++         G     S GESS   V+     ++F R  Q +  +  +  SDPEK Y IERLK L AT FEG+ DP +AE WL++LEKC+
Subjt:  MPPR-GRRAKEAVAETSEATGYHGDMSEGESSHPQVKVNVEEQRFTRIAQRLAASIGSVESDPEKKYSIERLKALRATPFEGTVDPVEAEVWLDLLEKCY

Query:  ---------------------------------------------------------------------RGSMTVAEYEKKYTKLSKYATTIIADETDRC
                                                                             +GS++VAEYE+KYT+LS+YA  IIA E+DRC
Subjt:  ---------------------------------------------------------------------RGSMTVAEYEKKYTKLSKYATTIIADETDRC

Query:  KRFEEGLREEIRTSVTASVEWTDFSRLVEAAMQVERSLMEKRMERDSSKSGRVVHSSGVTPGQSGMRFVPGVFKGGY--FKTRLSGQTTFKTSTSGGTRR
        +RFE GLR EIRT VTA  +WT+FS+LVE A++VE+S+ E   E+ + +  R   ++    G+   RF PG+       FK R  GQ +   S     +R
Subjt:  KRFEEGLREEIRTSVTASVEWTDFSRLVEAAMQVERSLMEKRMERDSSKSGRVVHSSGVTPGQSGMRFVPGVFKGGY--FKTRLSGQTTFKTSTSGGTRR

Query:  QGPKNFGGPAQSVEGSRSGQPG-ESTASSTQKPLCPTCGKYHWGQCRVNA--CYNCGQTGHFKRECPQLMQEDKPEQRTASHVVGQPQRSAGNVDEGTSR
        Q  +    P+Q +  +   QPG ES AS+ ++  C +CG+ H GQC V A  CY CGQ GHFK++CPQL    + +Q   S  + Q + S     EGTS 
Subjt:  QGPKNFGGPAQSVEGSRSGQPG-ESTASSTQKPLCPTCGKYHWGQCRVNA--CYNCGQTGHFKRECPQLMQEDKPEQRTASHVVGQPQRSAGNVDEGTSR

Query:  TSQKGDTGRSRQQGKIFAMTQQEADDAPNVVTGTLSICNTSAHVLIDPGATHSFIAKMFAVKVNSTVESLPEELSVYTPVGDVLVASEVYKDCMIEMDGV
          QKG  GR RQQGK++AMTQQE +DAP+V+TGT+ ICN  A VL DPGATHSF++ +F  K+N  +E L E L++YTPVGDVL+ +EV ++C + ++G+
Subjt:  TSQKGDTGRSRQQGKIFAMTQQEADDAPNVVTGTLSICNTSAHVLIDPGATHSFIAKMFAVKVNSTVESLPEELSVYTPVGDVLVASEVYKDCMIEMDGV

Query:  AMTANLIPLDIPEFDVTLGMDFLSKYRATMDCFQKEVVFKRFEGTEVIFRRDRKILPTCVISAVKARKLLSKGCSAYLAYVIDAQR---RGSTVPAPRRC
        ++  +L+PL++   DV LGMDFL  + A+MDC +KEVVF++    EV+FR  RK +   +IS +KA KLL KGC+A+LA+++  QR   +   VP  +  
Subjt:  AMTANLIPLDIPEFDVTLGMDFLSKYRATMDCFQKEVVFKRFEGTEVIFRRDRKILPTCVISAVKARKLLSKGCSAYLAYVIDAQR---RGSTVPAPRRC

Query:  LAFFKD
        L  F D
Subjt:  LAFFKD

A0A5D3DVI2 DNA/RNA polymerases superfamily protein6.2e-10642.06Show/hide
Query:  MPPRGRRAKEAVAETSEATGYHGDMSEGESSHPQVKVNVEEQRFTRIAQRLAASIGSVESDPEKKYSIERLKALRATPFEGTVDPVEAEVWLDLLEKCY-
        MPPR  R +    +  +  G     S GESS   V+     ++F R  Q +        SDPEK Y IERLK L AT FEG+ DP +AE WL++LEKC+ 
Subjt:  MPPRGRRAKEAVAETSEATGYHGDMSEGESSHPQVKVNVEEQRFTRIAQRLAASIGSVESDPEKKYSIERLKALRATPFEGTVDPVEAEVWLDLLEKCY-

Query:  ------------------------------------RGSMTVAEYEKKYTKLSKYATTIIADETDRCKRFEEGLREEIRTSVTASVEWTDFSRLVEAAMQ
                                            +GS++VAEYE+KYT+LS+YA  I+A E+DRC+RFE GL  EIRT +TA  +WT+FS+LVE A+ 
Subjt:  ------------------------------------RGSMTVAEYEKKYTKLSKYATTIIADETDRCKRFEEGLREEIRTSVTASVEWTDFSRLVEAAMQ

Query:  VERSLMEKRMERDSSKSGRVVHSSGVTPGQSGMRFVPGVFKGGY--FKTRLSGQTTFKTSTSGGTRRQGPKNFGGPAQSVEGSRSGQPG-ESTASSTQKP
        VE+S+ E   E+ + +  R   ++    G+   RF PG+       FK R  GQ +   S     +RQ  +    P+Q +  +   QPG ES AS+ ++ 
Subjt:  VERSLMEKRMERDSSKSGRVVHSSGVTPGQSGMRFVPGVFKGGY--FKTRLSGQTTFKTSTSGGTRRQGPKNFGGPAQSVEGSRSGQPG-ESTASSTQKP

Query:  LCPTCGKYHWGQCRVNA--CYNCGQTGHFKRECPQLMQEDKPEQRTASHVVGQPQRSAGNVDEGTSRTSQKGDTGRSRQQGKIFAMTQQEADDAPNVVTG
         C +CG+ H GQC V A  CY CGQ GHFK++CPQL    + +Q   S  + Q + S     EGTS   QKG  GR RQQGK++AMTQQE +DAP+V+TG
Subjt:  LCPTCGKYHWGQCRVNA--CYNCGQTGHFKRECPQLMQEDKPEQRTASHVVGQPQRSAGNVDEGTSRTSQKGDTGRSRQQGKIFAMTQQEADDAPNVVTG

Query:  TLSICNTSAHVLIDPGATHSFIAKMFAVKVNSTVESLPEELSVYTPVGDVLVASEVYKDCMIEMDGVAMTANLIPLDIPEFDVTLGMDFLSKYRATMDCF
        T+ ICN  A VL DPGATHSF++ +F  K+N  +E L E L++YTPVGDVL+ +EV ++C + ++G+++  +L+PL++   DV LGMDFL  + A+MDC 
Subjt:  TLSICNTSAHVLIDPGATHSFIAKMFAVKVNSTVESLPEELSVYTPVGDVLVASEVYKDCMIEMDGVAMTANLIPLDIPEFDVTLGMDFLSKYRATMDCF

Query:  QKEVVFKRFEGTEVIFRRDRKILPTCVISAVKARKLLSKGCSAYLAYVIDAQR---RGSTVPAPRRCLAFFKD
        +KEVVF++    EV+FR  RK +   +IS +KA KLL KGC+A+LA+++  QR   +   VP  +  L  F D
Subjt:  QKEVVFKRFEGTEVIFRRDRKILPTCVISAVKARKLLSKGCSAYLAYVIDAQR---RGSTVPAPRRCLAFFKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACCTCGAGGCAGGCGAGCTAAGGAAGCAGTAGCCGAAACTTCTGAAGCTACTGGGTACCATGGAGATATGTCTGAGGGTGAATCTAGTCATCCTCAAGTTAAAGT
CAATGTTGAGGAACAACGATTTACTAGAATTGCTCAGAGATTGGCTGCAAGCATTGGATCAGTGGAATCAGATCCAGAAAAGAAATACAGTATTGAAAGATTAAAGGCTT
TAAGAGCTACTCCCTTTGAGGGCACCGTAGATCCTGTTGAAGCTGAAGTATGGCTAGATTTGCTCGAGAAATGCTATCGTGGATCTATGACAGTGGCAGAATATGAGAAG
AAATACACAAAACTGTCTAAATATGCCACAACGATTATTGCAGATGAGACTGACCGATGTAAGAGGTTTGAAGAAGGGTTACGGGAGGAAATACGAACTTCGGTAACTGC
CAGTGTTGAATGGACGGATTTTTCCAGACTAGTGGAGGCAGCTATGCAGGTAGAAAGGAGTTTGATGGAGAAGAGGATGGAGCGTGATTCATCTAAAAGTGGACGTGTAG
TCCACTCTTCTGGCGTTACTCCGGGACAGTCAGGAATGAGATTTGTACCTGGCGTGTTTAAAGGAGGATACTTCAAAACTAGATTGAGCGGACAGACTACTTTTAAGACC
AGTACTAGTGGAGGCACACGGAGGCAAGGACCAAAGAACTTTGGTGGTCCAGCGCAGTCAGTAGAAGGTTCTCGAAGTGGACAACCTGGTGAGTCCACAGCTAGTTCCAC
GCAGAAACCGTTGTGTCCCACCTGCGGGAAGTACCATTGGGGACAGTGTAGGGTCAATGCATGTTATAACTGTGGACAGACTGGTCATTTTAAACGAGAATGCCCCCAAT
TGATGCAAGAAGATAAACCTGAGCAGAGAACTGCCTCACATGTGGTTGGTCAACCACAAAGATCTGCTGGAAATGTTGATGAGGGAACTAGTAGAACAAGTCAGAAGGGA
GATACGGGACGATCAAGACAGCAAGGAAAAATCTTTGCTATGACTCAACAAGAAGCCGATGATGCTCCTAATGTGGTTACTGGTACTCTTTCTATTTGTAATACTTCTGC
TCACGTTTTAATAGACCCTGGTGCTACCCATTCTTTTATTGCTAAAATGTTTGCTGTAAAAGTAAATAGTACAGTAGAATCTTTGCCTGAGGAATTGTCTGTTTATACTC
CTGTTGGTGATGTGTTGGTGGCTAGTGAGGTGTATAAAGATTGTATGATAGAAATGGATGGTGTGGCCATGACAGCCAACTTGATACCCCTAGATATTCCGGAATTTGAT
GTGACATTAGGGATGGATTTCTTATCCAAATATCGCGCCACTATGGATTGCTTCCAAAAGGAAGTTGTGTTTAAAAGATTTGAAGGGACTGAAGTTATTTTCAGGAGAGA
CAGGAAAATTCTTCCTACTTGTGTAATATCTGCAGTTAAGGCCAGGAAGCTATTGAGCAAGGGTTGTTCAGCATACCTTGCTTATGTGATAGATGCACAGCGCCGCGGCA
GCACCGTCCCAGCGCCGCGACGCTGTCTTGCGTTCTTCAAGGATGCGTCGAGGCAGTGTCTTCCCAGCGCAGCATTGTTACTCTGCCTCCATGCTGATGCGTTTCTGCTT
CAGCGCCGCAGCAGCGCTGCCTTAGCGCCGCGGCGCATCATGCGTTTCAACAAGGATGCGTTTTTCAGCTCTTTTTCACCATATTCTTGCTCAGTTTTGATCTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCACCTCGAGGCAGGCGAGCTAAGGAAGCAGTAGCCGAAACTTCTGAAGCTACTGGGTACCATGGAGATATGTCTGAGGGTGAATCTAGTCATCCTCAAGTTAAAGT
CAATGTTGAGGAACAACGATTTACTAGAATTGCTCAGAGATTGGCTGCAAGCATTGGATCAGTGGAATCAGATCCAGAAAAGAAATACAGTATTGAAAGATTAAAGGCTT
TAAGAGCTACTCCCTTTGAGGGCACCGTAGATCCTGTTGAAGCTGAAGTATGGCTAGATTTGCTCGAGAAATGCTATCGTGGATCTATGACAGTGGCAGAATATGAGAAG
AAATACACAAAACTGTCTAAATATGCCACAACGATTATTGCAGATGAGACTGACCGATGTAAGAGGTTTGAAGAAGGGTTACGGGAGGAAATACGAACTTCGGTAACTGC
CAGTGTTGAATGGACGGATTTTTCCAGACTAGTGGAGGCAGCTATGCAGGTAGAAAGGAGTTTGATGGAGAAGAGGATGGAGCGTGATTCATCTAAAAGTGGACGTGTAG
TCCACTCTTCTGGCGTTACTCCGGGACAGTCAGGAATGAGATTTGTACCTGGCGTGTTTAAAGGAGGATACTTCAAAACTAGATTGAGCGGACAGACTACTTTTAAGACC
AGTACTAGTGGAGGCACACGGAGGCAAGGACCAAAGAACTTTGGTGGTCCAGCGCAGTCAGTAGAAGGTTCTCGAAGTGGACAACCTGGTGAGTCCACAGCTAGTTCCAC
GCAGAAACCGTTGTGTCCCACCTGCGGGAAGTACCATTGGGGACAGTGTAGGGTCAATGCATGTTATAACTGTGGACAGACTGGTCATTTTAAACGAGAATGCCCCCAAT
TGATGCAAGAAGATAAACCTGAGCAGAGAACTGCCTCACATGTGGTTGGTCAACCACAAAGATCTGCTGGAAATGTTGATGAGGGAACTAGTAGAACAAGTCAGAAGGGA
GATACGGGACGATCAAGACAGCAAGGAAAAATCTTTGCTATGACTCAACAAGAAGCCGATGATGCTCCTAATGTGGTTACTGGTACTCTTTCTATTTGTAATACTTCTGC
TCACGTTTTAATAGACCCTGGTGCTACCCATTCTTTTATTGCTAAAATGTTTGCTGTAAAAGTAAATAGTACAGTAGAATCTTTGCCTGAGGAATTGTCTGTTTATACTC
CTGTTGGTGATGTGTTGGTGGCTAGTGAGGTGTATAAAGATTGTATGATAGAAATGGATGGTGTGGCCATGACAGCCAACTTGATACCCCTAGATATTCCGGAATTTGAT
GTGACATTAGGGATGGATTTCTTATCCAAATATCGCGCCACTATGGATTGCTTCCAAAAGGAAGTTGTGTTTAAAAGATTTGAAGGGACTGAAGTTATTTTCAGGAGAGA
CAGGAAAATTCTTCCTACTTGTGTAATATCTGCAGTTAAGGCCAGGAAGCTATTGAGCAAGGGTTGTTCAGCATACCTTGCTTATGTGATAGATGCACAGCGCCGCGGCA
GCACCGTCCCAGCGCCGCGACGCTGTCTTGCGTTCTTCAAGGATGCGTCGAGGCAGTGTCTTCCCAGCGCAGCATTGTTACTCTGCCTCCATGCTGATGCGTTTCTGCTT
CAGCGCCGCAGCAGCGCTGCCTTAGCGCCGCGGCGCATCATGCGTTTCAACAAGGATGCGTTTTTCAGCTCTTTTTCACCATATTCTTGCTCAGTTTTGATCTTTTAG
Protein sequenceShow/hide protein sequence
MPPRGRRAKEAVAETSEATGYHGDMSEGESSHPQVKVNVEEQRFTRIAQRLAASIGSVESDPEKKYSIERLKALRATPFEGTVDPVEAEVWLDLLEKCYRGSMTVAEYEK
KYTKLSKYATTIIADETDRCKRFEEGLREEIRTSVTASVEWTDFSRLVEAAMQVERSLMEKRMERDSSKSGRVVHSSGVTPGQSGMRFVPGVFKGGYFKTRLSGQTTFKT
STSGGTRRQGPKNFGGPAQSVEGSRSGQPGESTASSTQKPLCPTCGKYHWGQCRVNACYNCGQTGHFKRECPQLMQEDKPEQRTASHVVGQPQRSAGNVDEGTSRTSQKG
DTGRSRQQGKIFAMTQQEADDAPNVVTGTLSICNTSAHVLIDPGATHSFIAKMFAVKVNSTVESLPEELSVYTPVGDVLVASEVYKDCMIEMDGVAMTANLIPLDIPEFD
VTLGMDFLSKYRATMDCFQKEVVFKRFEGTEVIFRRDRKILPTCVISAVKARKLLSKGCSAYLAYVIDAQRRGSTVPAPRRCLAFFKDASRQCLPSAALLLCLHADAFLL
QRRSSAALAPRRIMRFNKDAFFSSFSPYSCSVLIF