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Clc02G11610 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G11610
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionTransmembrane protein
Genome locationClcChr02:22372013..22375974
RNA-Seq ExpressionClc02G11610
SyntenyClc02G11610
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576125.1 hypothetical protein SDJN03_26764, partial [Cucurbita argyrosperma subsp. sororia]2.0e-3781.48Show/hide
Query:  MYVVVGTTIGLFSPLAYVLGGFARSDKHAVRSATPHLFLLSFQIILTENVISGLSLFSPPIRVLVVLLLYMVRRIFVIMDWMKDVWLNKTLPANAPIQNY
        +YVVVGTTIGLF PLAYVLGGFARSD+HAVRSATPHLFLLSFQ ILTENVISGLSLFSPP+R LV  +LY VRRIFVIMDWMKDVWLNKTLPANAPI + 
Subjt:  MYVVVGTTIGLFSPLAYVLGGFARSDKHAVRSATPHLFLLSFQIILTENVISGLSLFSPPIRVLVVLLLYMVRRIFVIMDWMKDVWLNKTLPANAPIQNY

Query:  PLIYIGES
           + G +
Subjt:  PLIYIGES
KAG7014643.1 hypothetical protein SDJN02_24822, partial [Cucurbita argyrosperma subsp. argyrosperma]6.7e-3882.41Show/hide
Query:  MYVVVGTTIGLFSPLAYVLGGFARSDKHAVRSATPHLFLLSFQIILTENVISGLSLFSPPIRVLVVLLLYMVRRIFVIMDWMKDVWLNKTLPANAPIQNY
        MYVVVGTTIGLF PLAYVLGGFARSD+HAVRSATPHLFLLSFQ ILTENVISGLSLFSPP+R LV  +LY VRRIFVIMDWMKDVWLNKTLPANAPI + 
Subjt:  MYVVVGTTIGLFSPLAYVLGGFARSDKHAVRSATPHLFLLSFQIILTENVISGLSLFSPPIRVLVVLLLYMVRRIFVIMDWMKDVWLNKTLPANAPIQNY

Query:  PLIYIGES
           + G +
Subjt:  PLIYIGES
XP_004140642.2 uncharacterized protein LOC101203000 [Cucumis sativus]2.6e-3781.48Show/hide
Query:  MYVVVGTTIGLFSPLAYVLGGFARSDKHAVRSATPHLFLLSFQIILTENVISGLSLFSPPIRVLVVLLLYMVRRIFVIMDWMKDVWLNKTLPANAPIQNY
        MYVVVGTTIGLF PLAYVLGGFAR D+HAVRSATPHLFLLSFQ ILTENVISGLSLFSPP+R LV  LLY VRRIFVIMDWMKDVWLNK+LPANAPI++ 
Subjt:  MYVVVGTTIGLFSPLAYVLGGFARSDKHAVRSATPHLFLLSFQIILTENVISGLSLFSPPIRVLVVLLLYMVRRIFVIMDWMKDVWLNKTLPANAPIQNY

Query:  PLIYIGES
           + G +
Subjt:  PLIYIGES
XP_022954375.1 uncharacterized protein LOC111456631 [Cucurbita moschata]6.7e-3882.41Show/hide
Query:  MYVVVGTTIGLFSPLAYVLGGFARSDKHAVRSATPHLFLLSFQIILTENVISGLSLFSPPIRVLVVLLLYMVRRIFVIMDWMKDVWLNKTLPANAPIQNY
        MYVVVGTTIGLF PLAYVLGGFARSD+HAVRSATPHLFLLSFQ ILTENVISGLSLFSPP+R LV  +LY VRRIFVIMDWMKDVWLNKTLPANAPI + 
Subjt:  MYVVVGTTIGLFSPLAYVLGGFARSDKHAVRSATPHLFLLSFQIILTENVISGLSLFSPPIRVLVVLLLYMVRRIFVIMDWMKDVWLNKTLPANAPIQNY

Query:  PLIYIGES
           + G +
Subjt:  PLIYIGES
XP_023550142.1 uncharacterized protein LOC111808420 [Cucurbita pepo subsp. pepo]6.7e-3882.41Show/hide
Query:  MYVVVGTTIGLFSPLAYVLGGFARSDKHAVRSATPHLFLLSFQIILTENVISGLSLFSPPIRVLVVLLLYMVRRIFVIMDWMKDVWLNKTLPANAPIQNY
        MYVVVGTTIGLF PLAYVLGGFARSD+HAVRSATPHLFLLSFQ ILTENVISGLSLFSPP+R LV  +LY VRRIFVIMDWMKDVWLNKTLPANAPI + 
Subjt:  MYVVVGTTIGLFSPLAYVLGGFARSDKHAVRSATPHLFLLSFQIILTENVISGLSLFSPPIRVLVVLLLYMVRRIFVIMDWMKDVWLNKTLPANAPIQNY

Query:  PLIYIGES
           + G +
Subjt:  PLIYIGES
TrEMBL top hitse value%identityAlignment
A0A0A0KAF1 Uncharacterized protein1.2e-3781.48Show/hide
Query:  MYVVVGTTIGLFSPLAYVLGGFARSDKHAVRSATPHLFLLSFQIILTENVISGLSLFSPPIRVLVVLLLYMVRRIFVIMDWMKDVWLNKTLPANAPIQNY
        MYVVVGTTIGLF PLAYVLGGFAR D+HAVRSATPHLFLLSFQ ILTENVISGLSLFSPP+R LV  LLY VRRIFVIMDWMKDVWLNK+LPANAPI++ 
Subjt:  MYVVVGTTIGLFSPLAYVLGGFARSDKHAVRSATPHLFLLSFQIILTENVISGLSLFSPPIRVLVVLLLYMVRRIFVIMDWMKDVWLNKTLPANAPIQNY

Query:  PLIYIGES
           + G +
Subjt:  PLIYIGES
A0A1S3CB68 uncharacterized protein LOC1034988611.1e-3679.63Show/hide
Query:  MYVVVGTTIGLFSPLAYVLGGFARSDKHAVRSATPHLFLLSFQIILTENVISGLSLFSPPIRVLVVLLLYMVRRIFVIMDWMKDVWLNKTLPANAPIQNY
        MYVVVGTT+GLF PLAYVLGGFAR D+HAVRSATPHLFLLSFQ ILTENVISGLSLFSPP+R LV  LLY VRRIFVIMDW KDVWLNK LPANAPI++ 
Subjt:  MYVVVGTTIGLFSPLAYVLGGFARSDKHAVRSATPHLFLLSFQIILTENVISGLSLFSPPIRVLVVLLLYMVRRIFVIMDWMKDVWLNKTLPANAPIQNY

Query:  PLIYIGES
           + G +
Subjt:  PLIYIGES
A0A5D3DMD1 Uncharacterized protein1.1e-3679.63Show/hide
Query:  MYVVVGTTIGLFSPLAYVLGGFARSDKHAVRSATPHLFLLSFQIILTENVISGLSLFSPPIRVLVVLLLYMVRRIFVIMDWMKDVWLNKTLPANAPIQNY
        MYVVVGTT+GLF PLAYVLGGFAR D+HAVRSATPHLFLLSFQ ILTENVISGLSLFSPP+R LV  LLY VRRIFVIMDW KDVWLNK LPANAPI++ 
Subjt:  MYVVVGTTIGLFSPLAYVLGGFARSDKHAVRSATPHLFLLSFQIILTENVISGLSLFSPPIRVLVVLLLYMVRRIFVIMDWMKDVWLNKTLPANAPIQNY

Query:  PLIYIGES
           + G +
Subjt:  PLIYIGES
A0A6J1GS90 uncharacterized protein LOC1114566313.3e-3882.41Show/hide
Query:  MYVVVGTTIGLFSPLAYVLGGFARSDKHAVRSATPHLFLLSFQIILTENVISGLSLFSPPIRVLVVLLLYMVRRIFVIMDWMKDVWLNKTLPANAPIQNY
        MYVVVGTTIGLF PLAYVLGGFARSD+HAVRSATPHLFLLSFQ ILTENVISGLSLFSPP+R LV  +LY VRRIFVIMDWMKDVWLNKTLPANAPI + 
Subjt:  MYVVVGTTIGLFSPLAYVLGGFARSDKHAVRSATPHLFLLSFQIILTENVISGLSLFSPPIRVLVVLLLYMVRRIFVIMDWMKDVWLNKTLPANAPIQNY

Query:  PLIYIGES
           + G +
Subjt:  PLIYIGES
A0A6J1JUQ0 uncharacterized protein LOC1114880272.8e-3781.48Show/hide
Query:  MYVVVGTTIGLFSPLAYVLGGFARSDKHAVRSATPHLFLLSFQIILTENVISGLSLFSPPIRVLVVLLLYMVRRIFVIMDWMKDVWLNKTLPANAPIQNY
        MYVVVGTTIGLF PLAYVLGGFARSD+HAVRSATPHLFLLSFQ ILTENVISGLSLFSPP+R LV  +LY VRRIFVIMDWMKDVWLNKTL ANAPI + 
Subjt:  MYVVVGTTIGLFSPLAYVLGGFARSDKHAVRSATPHLFLLSFQIILTENVISGLSLFSPPIRVLVVLLLYMVRRIFVIMDWMKDVWLNKTLPANAPIQNY

Query:  PLIYIGES
           + G +
Subjt:  PLIYIGES
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27990.1 unknown protein5.3e-3378.95Show/hide
Query:  MYVVVGTTIGLFSPLAYVLGGFARSDKHAVRSATPHLFLLSFQIILTENVISGLSLFSPPIRVLVVLLLYMVRRIFVIMDWMKDVWLNKTLPANA
        +YV+ GTTIGLF PLAYVLGGFAR D HAVRSATPHLFLLS Q ILTENVISGLSLFSPP+R LV  LLY V RIFVI+ W KDVW NK+LP NA
Subjt:  MYVVVGTTIGLFSPLAYVLGGFARSDKHAVRSATPHLFLLSFQIILTENVISGLSLFSPPIRVLVVLLLYMVRRIFVIMDWMKDVWLNKTLPANA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACGTGGTGGTAGGAACGACCATAGGGTTGTTCTCGCCATTGGCATATGTGTTGGGTGGGTTTGCGAGAAGTGACAAGCATGCGGTTCGATCGGCAACACCACATTT
ATTCTTGTTGTCGTTTCAGATTATTTTAACGGAGAATGTGATAAGTGGGTTGTCATTGTTCTCGCCACCGATAAGAGTGTTGGTGGTGTTGCTACTTTACATGGTCCGGA
GAATTTTCGTCATCATGGATTGGATGAAAGATGTTTGGCTTAATAAAACCCTGCCGGCAAATGCACCCATCCAGAATTATCCATTGATCTACATAGGTGAGAGTAAGCTC
AATAGCGCTGCTCAACATTCCTCCCATTTCAGGGATAAGACCGGGATTGACTTATCGATGACGGTTATATCAAATGGACACAAATATATCTACAGTGAGGAGAGTGCAGC
TACGGGCTTTAGTGGAGTGTCCCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTACGTGGTGGTAGGAACGACCATAGGGTTGTTCTCGCCATTGGCATATGTGTTGGGTGGGTTTGCGAGAAGTGACAAGCATGCGGTTCGATCGGCAACACCACATTT
ATTCTTGTTGTCGTTTCAGATTATTTTAACGGAGAATGTGATAAGTGGGTTGTCATTGTTCTCGCCACCGATAAGAGTGTTGGTGGTGTTGCTACTTTACATGGTCCGGA
GAATTTTCGTCATCATGGATTGGATGAAAGATGTTTGGCTTAATAAAACCCTGCCGGCAAATGCACCCATCCAGAATTATCCATTGATCTACATAGGTGAGAGTAAGCTC
AATAGCGCTGCTCAACATTCCTCCCATTTCAGGGATAAGACCGGGATTGACTTATCGATGACGGTTATATCAAATGGACACAAATATATCTACAGTGAGGAGAGTGCAGC
TACGGGCTTTAGTGGAGTGTCCCATTAG
Protein sequenceShow/hide protein sequence
MYVVVGTTIGLFSPLAYVLGGFARSDKHAVRSATPHLFLLSFQIILTENVISGLSLFSPPIRVLVVLLLYMVRRIFVIMDWMKDVWLNKTLPANAPIQNYPLIYIGESKL
NSAAQHSSHFRDKTGIDLSMTVISNGHKYIYSEESAATGFSGVSH