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Clc02G11800 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G11800
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProtein CMSS1
Genome locationClcChr02:23038081..23039049
RNA-Seq ExpressionClc02G11800
SyntenyClc02G11800
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044636.1 protein CMSS1 [Cucumis melo var. makuwa]1.8e-1056.1Show/hide
Query:  INVFQKCSIHSVRSICISLHSLSNNFLDRCILGPSDSSVPDDKSLVKHIKEAFESSWK------ELFEGTTGPRSPAVLIIN
        +N FQ  + + V+   + L S+     DRCILGP +SSV DDKSLVKHIKEAF SSWK      EL EG T P SPAVLII+
Subjt:  INVFQKCSIHSVRSICISLHSLSNNFLDRCILGPSDSSVPDDKSLVKHIKEAFESSWK------ELFEGTTGPRSPAVLIIN

XP_004152079.1 protein CMSS1 [Cucumis sativus]2.4e-1053.66Show/hide
Query:  INVFQKCSIHSVRSICISLHSLSNNFLDRCILGPSDSSVPDDKSLVKHIKEAFESSWK------ELFEGTTGPRSPAVLIIN
        +N FQ  +   V S+ +      ++  DRCILGP +SSV DDKSLVKH+KEAF SSWK      EL EG T P SPAVLII+
Subjt:  INVFQKCSIHSVRSICISLHSLSNNFLDRCILGPSDSSVPDDKSLVKHIKEAFESSWK------ELFEGTTGPRSPAVLIIN

XP_038906095.1 protein CMSS1 isoform X1 [Benincasa hispida]8.2e-1172.73Show/hide
Query:  DRCILGPSDSSVPDDKSLVKHIKEAFESSWKE------LFEGTTGPRSPAVLIIN
        DRCILGP +SSV DDK+LVKHIKEAF SSWKE      LFEG T P SPAVLII+
Subjt:  DRCILGPSDSSVPDDKSLVKHIKEAFESSWKE------LFEGTTGPRSPAVLIIN

XP_038906103.1 protein CMSS1 isoform X2 [Benincasa hispida]8.2e-1172.73Show/hide
Query:  DRCILGPSDSSVPDDKSLVKHIKEAFESSWKE------LFEGTTGPRSPAVLIIN
        DRCILGP +SSV DDK+LVKHIKEAF SSWKE      LFEG T P SPAVLII+
Subjt:  DRCILGPSDSSVPDDKSLVKHIKEAFESSWKE------LFEGTTGPRSPAVLIIN

XP_038906109.1 protein CMS1 isoform X3 [Benincasa hispida]8.2e-1172.73Show/hide
Query:  DRCILGPSDSSVPDDKSLVKHIKEAFESSWKE------LFEGTTGPRSPAVLIIN
        DRCILGP +SSV DDK+LVKHIKEAF SSWKE      LFEG T P SPAVLII+
Subjt:  DRCILGPSDSSVPDDKSLVKHIKEAFESSWKE------LFEGTTGPRSPAVLIIN

TrEMBL top hitse value%identityAlignment
A0A0A0KUA9 Uncharacterized protein1.2e-1053.66Show/hide
Query:  INVFQKCSIHSVRSICISLHSLSNNFLDRCILGPSDSSVPDDKSLVKHIKEAFESSWK------ELFEGTTGPRSPAVLIIN
        +N FQ  +   V S+ +      ++  DRCILGP +SSV DDKSLVKH+KEAF SSWK      EL EG T P SPAVLII+
Subjt:  INVFQKCSIHSVRSICISLHSLSNNFLDRCILGPSDSSVPDDKSLVKHIKEAFESSWK------ELFEGTTGPRSPAVLIIN

A0A1S3BYM0 protein CMSS14.4e-1054.88Show/hide
Query:  INVFQKCSIHSVRSICISLHSLSNNFLDRCILGPSDSSVPDDKSLVKHIKEAFESSWK------ELFEGTTGPRSPAVLIIN
        +N FQ  + + V+   + L S+     DRCILGP +SSV DDKSLVKHIKEA  SSWK      EL EG T P SPAVLII+
Subjt:  INVFQKCSIHSVRSICISLHSLSNNFLDRCILGPSDSSVPDDKSLVKHIKEAFESSWK------ELFEGTTGPRSPAVLIIN

A0A5A7TR86 Protein CMSS18.9e-1156.1Show/hide
Query:  INVFQKCSIHSVRSICISLHSLSNNFLDRCILGPSDSSVPDDKSLVKHIKEAFESSWK------ELFEGTTGPRSPAVLIIN
        +N FQ  + + V+   + L S+     DRCILGP +SSV DDKSLVKHIKEAF SSWK      EL EG T P SPAVLII+
Subjt:  INVFQKCSIHSVRSICISLHSLSNNFLDRCILGPSDSSVPDDKSLVKHIKEAFESSWK------ELFEGTTGPRSPAVLIIN

A0A5D3CZG6 Protein CMSS14.4e-1054.88Show/hide
Query:  INVFQKCSIHSVRSICISLHSLSNNFLDRCILGPSDSSVPDDKSLVKHIKEAFESSWK------ELFEGTTGPRSPAVLIIN
        +N FQ  + + V+   + L S+     DRCILGP +SSV DDKSLVKHIKEA  SSWK      EL EG T P SPAVLII+
Subjt:  INVFQKCSIHSVRSICISLHSLSNNFLDRCILGPSDSSVPDDKSLVKHIKEAFESSWK------ELFEGTTGPRSPAVLIIN

A0A6J1GWA7 protein CMS13.7e-0966.67Show/hide
Query:  RCILGPSDSSVPDDKSLVKHIKEAFESSWKE------LFEGTTGPRSPAVLIIN
        RCILGP  SS+ D+K+LVKHIKEAF SSWKE      L EG T P SPAVLII+
Subjt:  RCILGPSDSSVPDDKSLVKHIKEAFESSWKE------LFEGTTGPRSPAVLIIN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTCCATGGAGAATAGATTGCCAACGCATAGTCCTGCTTAAGAAGTCGTCAACGCATCTACAGATTCTTCACCATTGGAGCTTCGGCGTCATTTCATCTCCCGACAA
CAAAGCCCAAGCTTCCTTAGGAAATTCTGAACCATTTCATCATTTGTTCGTCTGCTTCTTGTGGAGCACTATCAATGTCTTTCAGAAATGCAGCATCCATAGCGTTCGAT
CCATCTGCATCTCACTCCACTCGCTATCAAATAATTTTTTAGATAGATGCATTCTAGGTCCTTCTGATAGTTCAGTTCCAGATGATAAAAGCTTGGTGAAACATATCAAG
GAGGCTTTTGAGTCATCGTGGAAAGAACTCTTTGAAGGAACGACTGGACCTAGGAGTCCTGCTGTTCTTATAATCAACAGATGCACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGTCCATGGAGAATAGATTGCCAACGCATAGTCCTGCTTAAGAAGTCGTCAACGCATCTACAGATTCTTCACCATTGGAGCTTCGGCGTCATTTCATCTCCCGACAA
CAAAGCCCAAGCTTCCTTAGGAAATTCTGAACCATTTCATCATTTGTTCGTCTGCTTCTTGTGGAGCACTATCAATGTCTTTCAGAAATGCAGCATCCATAGCGTTCGAT
CCATCTGCATCTCACTCCACTCGCTATCAAATAATTTTTTAGATAGATGCATTCTAGGTCCTTCTGATAGTTCAGTTCCAGATGATAAAAGCTTGGTGAAACATATCAAG
GAGGCTTTTGAGTCATCGTGGAAAGAACTCTTTGAAGGAACGACTGGACCTAGGAGTCCTGCTGTTCTTATAATCAACAGATGCACTTAG
Protein sequenceShow/hide protein sequence
MRPWRIDCQRIVLLKKSSTHLQILHHWSFGVISSPDNKAQASLGNSEPFHHLFVCFLWSTINVFQKCSIHSVRSICISLHSLSNNFLDRCILGPSDSSVPDDKSLVKHIK
EAFESSWKELFEGTTGPRSPAVLIINRCT