; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G12880 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G12880
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptioncysteine-rich and transmembrane domain-containing protein A-like
Genome locationClcChr02:24816701..24819135
RNA-Seq ExpressionClc02G12880
SyntenyClc02G12880
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035191.1 hypothetical protein SDJN02_01986, partial [Cucurbita argyrosperma subsp. argyrosperma]5.7e-2673.91Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPP---PGYGPQYAQPPPKNETTGCLEGWLVTS--LFHLIPHNWKMA
        MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYP AQGYPPPPPPP   P Y P   QPPPK++ TGCLEGW VTS  L   +  +W +A
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPP---PGYGPQYAQPPPKNETTGCLEGWLVTS--LFHLIPHNWKMA

XP_008457737.2 PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo]3.8e-3093.06Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPPPGYGPQYAQPPPKNETTGCLEGWL
        MSYYDHQQPPVGAPPPQGFPPKD+YPPPGYPVQGYPAAQGYPPPPPPPPGY PQY+QPPPKNE+TGCLEG L
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPPPGYGPQYAQPPPKNETTGCLEGWL

XP_011649307.1 cysteine-rich and transmembrane domain-containing protein WIH1 [Cucumis sativus]5.9e-3195.83Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPPPGYGPQYAQPPPKNETTGCLEGWL
        MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPPPGY PQY+QPPPKNETTGCLEG L
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPPPGYGPQYAQPPPKNETTGCLEGWL

XP_022947084.1 cysteine-rich and transmembrane domain-containing protein WIH1-like isoform X1 [Cucurbita moschata]7.5e-2677.01Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPP---PGYGPQYAQPPPKNETTGCLEGWLVTSLFHLIPHNW
        MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYP AQGYPPPPPPP   P Y P   QPPPK++ TGCLEGW VTS   +I  N+
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPP---PGYGPQYAQPPPKNETTGCLEGWLVTSLFHLIPHNW

XP_038901964.1 cysteine-rich and transmembrane domain-containing protein WIH1-like [Benincasa hispida]5.5e-2994.52Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYP-PPPPPPPGYGPQYAQPPPKNETTGCLEGWL
        MSYYDHQQPPVGAPPPQGFP KDAYPPPGYPVQGYPAAQGYP PPPPPPPGY PQYAQPPPKNETTGCLEG L
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYP-PPPPPPPGYGPQYAQPPPKNETTGCLEGWL

TrEMBL top hitse value%identityAlignment
A0A0A0LJA6 CYSTM domain-containing protein2.9e-3195.83Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPPPGYGPQYAQPPPKNETTGCLEGWL
        MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPPPGY PQY+QPPPKNETTGCLEG L
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPPPGYGPQYAQPPPKNETTGCLEGWL

A0A1S3C5S7 cysteine-rich and transmembrane domain-containing protein A-like1.9e-3093.06Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPPPGYGPQYAQPPPKNETTGCLEGWL
        MSYYDHQQPPVGAPPPQGFPPKD+YPPPGYPVQGYPAAQGYPPPPPPPPGY PQY+QPPPKNE+TGCLEG L
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPPPGYGPQYAQPPPKNETTGCLEGWL

A0A6J1G5R9 cysteine-rich and transmembrane domain-containing protein WIH1-like isoform X13.6e-2677.01Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPP---PGYGPQYAQPPPKNETTGCLEGWLVTSLFHLIPHNW
        MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYP AQGYPPPPPPP   P Y P   QPPPK++ TGCLEGW VTS   +I  N+
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPP---PGYGPQYAQPPPKNETTGCLEGWLVTSLFHLIPHNW

A0A6J1G5U7 cysteine-rich and transmembrane domain-containing protein WIH1-like isoform X22.9e-2382.67Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPP---PGYGPQYAQPPPKNETTGCLEGWL
        MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYP AQGYPPPPPPP   P Y P   QPPPK++ TGCLEG L
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPP---PGYGPQYAQPPPKNETTGCLEGWL

A0A6J1L666 cysteine-rich and transmembrane domain-containing protein WIH1-like6.0e-2178.67Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPP---PGYGPQYAQPPPKNETTGCLEGWL
        MSYYDHQQPPVGAPPPQG PPKDAYPPPGYPVQGYP AQ YPPPPPPP   P Y P   QP PK++ TGCLEG L
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPP---PGYGPQYAQPPPKNETTGCLEGWL

SwissProt top hitse value%identityAlignment
P31356 Rhodopsin8.4e-0463.46Show/hide
Query:  PPVG-APPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPPPGYGPQYAQPP
        PP G APPPQG+PP+  YPP GYP QGYP  QGYPPPP   P  G   A PP
Subjt:  PPVG-APPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPPPGYGPQYAQPP

Q8LCL8 Cysteine-rich and transmembrane domain-containing protein B3.8e-0450Show/hide
Query:  QQPP-VGAPPPQGF----PPKDAYPPPG--YPVQGYPAAQGYPPPPPPPPGYGPQ------YAQ---PPPKNE----TTGCLEG
        QQPP VG PP   +    PPKDAYPPPG  YP QGYP  QGYP    PP GY PQ      Y Q   PP + +    + G LEG
Subjt:  QQPP-VGAPPPQGF----PPKDAYPPPG--YPVQGYPAAQGYPPPPPPPPGYGPQ------YAQ---PPPKNE----TTGCLEG

Q8S8M0 Cysteine-rich and transmembrane domain-containing protein WIH21.1e-0853.41Show/hide
Query:  MSYYDHQQPPVGAPPPQGFP----PKDAYPPPGYPVQGYPAAQGYPPPPPP---------PPGYGPQYAQPP---PKNETTGCLEGWL
        MS Y+  QPPVG PPPQG+P    PKDAYPP GYP QGYP  QGYPP   P         PP Y PQY  PP    +  + G LEG L
Subjt:  MSYYDHQQPPVGAPPPQGFP----PKDAYPPPGYPVQGYPAAQGYPPPPPP---------PPGYGPQYAQPP---PKNETTGCLEGWL

Q9FJW3 Cysteine-rich and transmembrane domain-containing protein WIH16.0e-1056.94Show/hide
Query:  YDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPA---AQGYPPPPPPPPGYGPQYAQPPPKNETTGCLEGWL
        Y  +Q PVGAPPPQG+PPKD YPP GYP  GYP    AQGYP    PP    PQY+Q P + +  G LEG L
Subjt:  YDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPA---AQGYPPPPPPPPGYGPQYAQPPPKNETTGCLEGWL

Arabidopsis top hitse value%identityAlignment
AT2G41420.1 proline-rich family protein8.0e-1053.41Show/hide
Query:  MSYYDHQQPPVGAPPPQGFP----PKDAYPPPGYPVQGYPAAQGYPPPPPP---------PPGYGPQYAQPP---PKNETTGCLEGWL
        MS Y+  QPPVG PPPQG+P    PKDAYPP GYP QGYP  QGYPP   P         PP Y PQY  PP    +  + G LEG L
Subjt:  MSYYDHQQPPVGAPPPQGFP----PKDAYPPPGYPVQGYPAAQGYPPPPPP---------PPGYGPQYAQPP---PKNETTGCLEGWL

AT3G49845.1 unknown protein2.9e-0756.34Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGY-PVQGYPAAQ----GYPPP--PPPPPGYG---PQYAQPPPK
        MSY D Q  PV APPPQG+PPK+ YPP GY P  GYP  Q    GYPP   PPP  GYG   P    PPP+
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGY-PVQGYPAAQ----GYPPP--PPPPPGYG---PQYAQPPPK

AT5G67600.1 unknown protein4.3e-1156.94Show/hide
Query:  YDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPA---AQGYPPPPPPPPGYGPQYAQPPPKNETTGCLEGWL
        Y  +Q PVGAPPPQG+PPKD YPP GYP  GYP    AQGYP    PP    PQY+Q P + +  G LEG L
Subjt:  YDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPA---AQGYPPPPPPPPGYGPQYAQPPPKNETTGCLEGWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTACTACGACCACCAACAGCCCCCTGTTGGGGCTCCGCCGCCGCAAGGGTTCCCTCCCAAGGACGCTTACCCTCCGCCGGGGTACCCTGTTCAAGGTTACCCTGC
AGCTCAAGGCTACCCTCCTCCACCCCCGCCGCCGCCGGGTTATGGCCCACAGTACGCTCAGCCTCCTCCCAAGAATGAAACAACCGGTTGCCTTGAAGGATGGTTAGTCA
CTTCCCTCTTTCACTTAATTCCCCACAATTGGAAAATGGCCCTATCACTGAGATTCTCGAATTTTAGCAGCACTTTGTTGTTGCTGTTTGTTGGATGCTTGCTTCTGACA
ACAAGGATTGGACTATGA
mRNA sequenceShow/hide mRNA sequence
TTTCAATCTTTCTTCTTCTTCTTTCCAAATTCAAACTAATTTCCCCTCCCCTTACCATGAGTTACTACGACCACCAACAGCCCCCTGTTGGGGCTCCGCCGCCGCAAGGG
TTCCCTCCCAAGGACGCTTACCCTCCGCCGGGGTACCCTGTTCAAGGTTACCCTGCAGCTCAAGGCTACCCTCCTCCACCCCCGCCGCCGCCGGGTTATGGCCCACAGTA
CGCTCAGCCTCCTCCCAAGAATGAAACAACCGGTTGCCTTGAAGGATGGTTAGTCACTTCCCTCTTTCACTTAATTCCCCACAATTGGAAAATGGCCCTATCACTGAGAT
TCTCGAATTTTAGCAGCACTTTGTTGTTGCTGTTTGTTGGATGCTTGCTTCTGACAACAAGGATTGGACTATGATCAGTGTACTTATTATTATTCCAATATCATTGTATT
AT
Protein sequenceShow/hide protein sequence
MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPPPGYGPQYAQPPPKNETTGCLEGWLVTSLFHLIPHNWKMALSLRFSNFSSTLLLLFVGCLLLT
TRIGL