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Clc02G13800 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G13800
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr02:26077152..26081416
RNA-Seq ExpressionClc02G13800
SyntenyClc02G13800
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605255.1 hypothetical protein SDJN03_02572, partial [Cucurbita argyrosperma subsp. sororia]2.9e-1859Show/hide
Query:  MDSNGFKSGKLSKQLKWAEADAKFLRKLSLNKNKTNEIAS----ASSIFGFETNRSNDIINYSRQRYLRSYKFNDDIEEEKASHIDKAKKWFNLKPRAMS
        MD  G +S KL  Q KWAEADA FL++LSLNKN T EI+S     SS+ GFETNR+N+I  YSRQR+LRSY F+  +EE+K     KA+KWFNLK R  S
Subjt:  MDSNGFKSGKLSKQLKWAEADAKFLRKLSLNKNKTNEIAS----ASSIFGFETNRSNDIINYSRQRYLRSYKFNDDIEEEKASHIDKAKKWFNLKPRAMS
KGN62030.1 hypothetical protein Csa_006081 [Cucumis sativus]3.7e-1857.14Show/hide
Query:  SNGFKSGKL-SKQLKWAEADAKFLRKLSLNKN---------KTNEIASASSIFGFETNRSNDIINYSRQRYLRSYKFNDDIEE------EKASHIDKAKK
        SNGF  GK+ SKQ KWAEADA FLRKLSLNKN         K   +  +SS+FGFE  RSNDIINYSRQRYLRSYKFNDD +E      +K S  +K   
Subjt:  SNGFKSGKL-SKQLKWAEADAKFLRKLSLNKN---------KTNEIASASSIFGFETNRSNDIINYSRQRYLRSYKFNDDIEE------EKASHIDKAKK

Query:  WFNLKPRAMSFR
        +F LK  AM  +
Subjt:  WFNLKPRAMSFR
XP_023006822.1 uncharacterized protein LOC111499491 [Cucurbita maxima]3.7e-1859Show/hide
Query:  MDSNGFKSGKLSKQLKWAEADAKFLRKLSLNKNKTNEIASA----SSIFGFETNRSNDIINYSRQRYLRSYKFNDDIEEEKASHIDKAKKWFNLKPRAMS
        MD  G  S KL  Q KWAEADA FL++LSLNKN T EI+S+    SS+ GFETNR+N+I  YSRQR+LRSY F+  +EE+K     KA+KWFNLK R  S
Subjt:  MDSNGFKSGKLSKQLKWAEADAKFLRKLSLNKNKTNEIASA----SSIFGFETNRSNDIINYSRQRYLRSYKFNDDIEEEKASHIDKAKKWFNLKPRAMS
TrEMBL top hitse value%identityAlignment
A0A0A0LJK1 Uncharacterized protein1.8e-1857.14Show/hide
Query:  SNGFKSGKL-SKQLKWAEADAKFLRKLSLNKN---------KTNEIASASSIFGFETNRSNDIINYSRQRYLRSYKFNDDIEE------EKASHIDKAKK
        SNGF  GK+ SKQ KWAEADA FLRKLSLNKN         K   +  +SS+FGFE  RSNDIINYSRQRYLRSYKFNDD +E      +K S  +K   
Subjt:  SNGFKSGKL-SKQLKWAEADAKFLRKLSLNKN---------KTNEIASASSIFGFETNRSNDIINYSRQRYLRSYKFNDDIEE------EKASHIDKAKK

Query:  WFNLKPRAMSFR
        +F LK  AM  +
Subjt:  WFNLKPRAMSFR
A0A6J1KWW2 uncharacterized protein LOC1114994911.8e-1859Show/hide
Query:  MDSNGFKSGKLSKQLKWAEADAKFLRKLSLNKNKTNEIASA----SSIFGFETNRSNDIINYSRQRYLRSYKFNDDIEEEKASHIDKAKKWFNLKPRAMS
        MD  G  S KL  Q KWAEADA FL++LSLNKN T EI+S+    SS+ GFETNR+N+I  YSRQR+LRSY F+  +EE+K     KA+KWFNLK R  S
Subjt:  MDSNGFKSGKLSKQLKWAEADAKFLRKLSLNKNKTNEIASA----SSIFGFETNRSNDIINYSRQRYLRSYKFNDDIEEEKASHIDKAKKWFNLKPRAMS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCAAATGGCTTCAAAAGTGGAAAGCTTTCAAAGCAACTAAAATGGGCAGAAGCAGATGCTAAGTTTTTGAGAAAACTAAGCTTAAACAAGAACAAGACA
AATGAGATAGCATCAGCTTCTTCCATTTTTGGGTTTGAAACAAATAGGAGTAATGATATTATTAACTATTCGAGGCAAAGGTATTTGAGAAGCTACAAGTTCAAT
GATGATATTGAGGAGGAAAAAGCGAGTCATATTGACAAGGCAAAGAAGTGGTTCAACTTAAAACCAAGAGCAATGTCATTTAGGCTGCCCGAGAAAATACTAGAT
ATGAGTCCCTATGGTGAATATGTGAAAGTTAGTGCCCCTAGCTCGCCGCTCTCATTGTTGAAGTCCATCGGTAGCCCTTCGTTGAAGTCTGTTGGCTGCCTGTCC
TCTTTCTCCCTCACCTACGCCATCACCGCCCCTCCCCTCTCTCCATCACCCACCATCGGTATCGTCGCCCATCCCCTTTCTCCCTTAGATCTGTCGGTCGTCGCC
CGTCCCTTCCCTTCTCTCCCTCACCCACCACCAGTATGTCTCCCTTCAAATTTTTGGAATTTTACTTTCTGTTATAAGAACTACCGATGCCAAGTATATGTCGTC
GGCATTGTGAGGATACGCCGACAACGTTTTCAAACTGTCGGCATTAAAGAACGGCTGATGCCACATTGCTTTGTTTGCGTATATACCTTTTGTCTACGCATTTTG
CTAGCCGTCGGCATCGGTCTGACTTCACAACTGTTGTCGACAGTTTTAATCTACACCGATGCTTATTTTTTTTTGTGCGCCGACATAAGCTCTATTGATTACAAC
GTCAGTGAAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCAAATGGCTTCAAAAGTGGAAAGCTTTCAAAGCAACTAAAATGGGCAGAAGCAGATGCTAAGTTTTTGAGAAAACTAAGCTTAAACAAGAACAAGACA
AATGAGATAGCATCAGCTTCTTCCATTTTTGGGTTTGAAACAAATAGGAGTAATGATATTATTAACTATTCGAGGCAAAGGTATTTGAGAAGCTACAAGTTCAAT
GATGATATTGAGGAGGAAAAAGCGAGTCATATTGACAAGGCAAAGAAGTGGTTCAACTTAAAACCAAGAGCAATGTCATTTAGGCTGCCCGAGAAAATACTAGAT
ATGAGTCCCTATGGTGAATATGTGAAAGTTAGTGCCCCTAGCTCGCCGCTCTCATTGTTGAAGTCCATCGGTAGCCCTTCGTTGAAGTCTGTTGGCTGCCTGTCC
TCTTTCTCCCTCACCTACGCCATCACCGCCCCTCCCCTCTCTCCATCACCCACCATCGGTATCGTCGCCCATCCCCTTTCTCCCTTAGATCTGTCGGTCGTCGCC
CGTCCCTTCCCTTCTCTCCCTCACCCACCACCAGTATGTCTCCCTTCAAATTTTTGGAATTTTACTTTCTGTTATAAGAACTACCGATGCCAAGTATATGTCGTC
GGCATTGTGAGGATACGCCGACAACGTTTTCAAACTGTCGGCATTAAAGAACGGCTGATGCCACATTGCTTTGTTTGCGTATATACCTTTTGTCTACGCATTTTG
CTAGCCGTCGGCATCGGTCTGACTTCACAACTGTTGTCGACAGTTTTAATCTACACCGATGCTTATTTTTTTTTGTGCGCCGACATAAGCTCTATTGATTACAAC
GTCAGTGAAGGATGA
Protein sequenceShow/hide protein sequence
MDSNGFKSGKLSKQLKWAEADAKFLRKLSLNKNKTNEIASASSIFGFETNRSNDIINYSRQRYLRSYKFNDDIEEEKASHIDKAKKWFNLKPRAMSFRLPEKILD
MSPYGEYVKVSAPSSPLSLLKSIGSPSLKSVGCLSSFSLTYAITAPPLSPSPTIGIVAHPLSPLDLSVVARPFPSLPHPPPVCLPSNFWNFTFCYKNYRCQVYVV
GIVRIRRQRFQTVGIKERLMPHCFVCVYTFCLRILLAVGIGLTSQLLSTVLIYTDAYFFLCADISSIDYNVSEG