; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G13830 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G13830
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionB3 domain-containing transcription factor VRN1-like
Genome locationClcChr02:26101839..26103220
RNA-Seq ExpressionClc02G13830
SyntenyClc02G13830
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003340 - B3 DNA binding domain
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148065.1 B3 domain-containing transcription factor VRN1 isoform X2 [Cucumis sativus]2.6e-16279.33Show/hide
Query:  MALFSSPNPHFFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLI
        M LF+SPNPHFFKI+LHQ L QQKL++PNKFV NNA SLL+N ATL LPDG+ W  QL +LDGKICFLRGWPE V+FY+VQPGYFLVFQLKGICCFNVLI
Subjt:  MALFSSPNPHFFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLI

Query:  FDTSATEIDYPTRRPPILIPKTENEDEEESVQILNQAVLKKRRR--EKDEEAAAYCSFRETKKIMRKNVKIKIEEHRGFTAPQGFRDEDEDEDLERNYSR
        FDTSATEIDYP RR P+++PK+E++DE ES+QIL++ VLKKRRR  +K++E +AY S RE    M+KN+KIKI + R FT PQGF D+DEDEDLE +YS 
Subjt:  FDTSATEIDYPTRRPPILIPKTENEDEEESVQILNQAVLKKRRR--EKDEEAAAYCSFRETKKIMRKNVKIKIEEHRGFTAPQGFRDEDEDEDLERNYSR

Query:  RQSNYRGSAYNERDDGRSSPESMRPLNPRKTPQVLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTGNYLSMPRIFSERYIKESVDVKLEVGDGRGW
        RQ+NYR S YNER+DGRSSPESMRP+NPRKT QVLTENQLVV+RRA SFKCRT NPSFMVTMRPSYIQTGN LS+PRIFSERYIKESVDVKLEVGDGR W
Subjt:  RQSNYRGSAYNERDDGRSSPESMRPLNPRKTPQVLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTGNYLSMPRIFSERYIKESVDVKLEVGDGRGW

Query:  RVWCGVRWAFTRRRTELKSGWKRFAVDNELEEGDICVFELMNKTPKVHFHVTIFRLPS
        +VWCGVRWAFTRRRTELK GWKRFAVDNELEEGDICVFELMNKTPKVHF VTIFRLPS
Subjt:  RVWCGVRWAFTRRRTELKSGWKRFAVDNELEEGDICVFELMNKTPKVHFHVTIFRLPS

XP_008457851.1 PREDICTED: B3 domain-containing transcription factor VRN1-like [Cucumis melo]1.4e-16379.28Show/hide
Query:  MALFSSPNPHFFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLI
        M  F SPNPHFFKIILHQ L QQKL++PNKFV NN DSLL+N   L LPDGA W  QL KLDGK CFLRGWPE V FYS+QPGYFLVFQLKGICCFNVLI
Subjt:  MALFSSPNPHFFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLI

Query:  FDTSATEIDYPTRRPPILIPKTENEDEEESVQILNQAVLKKRRR--EKDEEAAAYCSFRETKKIMRKNVKIKIEEHRGFTAPQGF----RDEDEDEDLER
        FDTSATEIDYP RRPP+LIPK+E+EDEEES+ IL++A LKKR+R  +K++E +AYCS R+    M+KN++IKI +HR FT PQ F     DEDEDEDLE 
Subjt:  FDTSATEIDYPTRRPPILIPKTENEDEEESVQILNQAVLKKRRR--EKDEEAAAYCSFRETKKIMRKNVKIKIEEHRGFTAPQGF----RDEDEDEDLER

Query:  NYSRRQSNYRGSAYNERDDGRSSPESMRPLNPRKTPQVLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTGNYLSMPRIFSERYIKESVDVKLEVGD
        NYS RQ+NYRGSAYNE +DGRSSPESMRP+NPRK PQVLTENQLVVLRRA SFKCRT NPSFMVTMRPSYIQTGN LS+PRIFSERYIKES+DVKLEVGD
Subjt:  NYSRRQSNYRGSAYNERDDGRSSPESMRPLNPRKTPQVLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTGNYLSMPRIFSERYIKESVDVKLEVGD

Query:  GRGWRVWCGVRWAFTRRRTELKSGWKRFAVDNELEEGDICVFELMNKTPKVHFHVTIFRLPS
        GR W+VWCGVRWAFTRRRTELK GWKRFAVDNELEEGDICVFEL+NKTPKVHFHVTIFRLP+
Subjt:  GRGWRVWCGVRWAFTRRRTELKSGWKRFAVDNELEEGDICVFELMNKTPKVHFHVTIFRLPS

XP_011649360.1 B3 domain-containing transcription factor VRN1 isoform X1 [Cucumis sativus]5.2e-15873.96Show/hide
Query:  MALFSSPNPHFFKIILHQTLIQQKL--------------------------EIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEV
        M LF+SPNPHFFKI+LHQ L QQKL                          ++PNKFV NNA SLL+N ATL LPDG+ W  QL +LDGKICFLRGWPE 
Subjt:  MALFSSPNPHFFKIILHQTLIQQKL--------------------------EIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEV

Query:  VDFYSVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPTRRPPILIPKTENEDEEESVQILNQAVLKKRRR--EKDEEAAAYCSFRETKKIMRKNVKIKIE
        V+FY+VQPGYFLVFQLKGICCFNVLIFDTSATEIDYP RR P+++PK+E++DE ES+QIL++ VLKKRRR  +K++E +AY S RE    M+KN+KIKI 
Subjt:  VDFYSVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPTRRPPILIPKTENEDEEESVQILNQAVLKKRRR--EKDEEAAAYCSFRETKKIMRKNVKIKIE

Query:  EHRGFTAPQGFRDEDEDEDLERNYSRRQSNYRGSAYNERDDGRSSPESMRPLNPRKTPQVLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTGNYLS
        + R FT PQGF D+DEDEDLE +YS RQ+NYR S YNER+DGRSSPESMRP+NPRKT QVLTENQLVV+RRA SFKCRT NPSFMVTMRPSYIQTGN LS
Subjt:  EHRGFTAPQGFRDEDEDEDLERNYSRRQSNYRGSAYNERDDGRSSPESMRPLNPRKTPQVLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTGNYLS

Query:  MPRIFSERYIKESVDVKLEVGDGRGWRVWCGVRWAFTRRRTELKSGWKRFAVDNELEEGDICVFELMNKTPKVHFHVTIFRLPS
        +PRIFSERYIKESVDVKLEVGDGR W+VWCGVRWAFTRRRTELK GWKRFAVDNELEEGDICVFELMNKTPKVHF VTIFRLPS
Subjt:  MPRIFSERYIKESVDVKLEVGDGRGWRVWCGVRWAFTRRRTELKSGWKRFAVDNELEEGDICVFELMNKTPKVHFHVTIFRLPS

XP_038902136.1 B3 domain-containing transcription factor VRN1-like isoform X1 [Benincasa hispida]2.6e-17079.02Show/hide
Query:  MALFSSPNPHFFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLI
        MALFSSPNPHFFKIILHQ LIQQKL++PNKFV NN  SLL++KATL LPDGANW +QLK LDGKICFLRGWPE V+FYS+QPGYFLVFQL+ ICCFNVLI
Subjt:  MALFSSPNPHFFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLI

Query:  FDTSATEIDYPTRRPPILIPKTENEDEEESVQILNQAVLKKRRREKDEEAAAYCSFRETKKIMRKNVKIKIEEHRGFTAPQGF--RDEDEDEDLERNYSR
        FDTSATEIDYPTR P +LIPKTENED EESV+ LN AVLKKR REK+E+  AYCSFRE KK+MRKNVKIKIE+HRGFT  QGF   DEDEDEDLE NYSR
Subjt:  FDTSATEIDYPTRRPPILIPKTENEDEEESVQILNQAVLKKRRREKDEEAAAYCSFRETKKIMRKNVKIKIEEHRGFTAPQGF--RDEDEDEDLERNYSR

Query:  RQSNYRG----------------------------SAYNERDDGRSSPESMRPLNPRKTPQVLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTGNY
        RQS YRG                            SAYNE DDGR SPE+MRP+NPRKTP VLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTGNY
Subjt:  RQSNYRG----------------------------SAYNERDDGRSSPESMRPLNPRKTPQVLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTGNY

Query:  LSMPRIFSERYIKESVDVKLEVGDGRGWRVWCGVRWAFTRRRTELKSGWKRFAVDNELEEGDICVFELMNKTPKVHFHVTIFRLPS
        LS+PRIF+ERYIKES+DVKLE+GDGR WRV CGVRWAFTRRRTELK GWKRFAVDNELEEGDICVFEL+NKT KVHFHVTIFRLPS
Subjt:  LSMPRIFSERYIKESVDVKLEVGDGRGWRVWCGVRWAFTRRRTELKSGWKRFAVDNELEEGDICVFELMNKTPKVHFHVTIFRLPS

XP_038902137.1 B3 domain-containing transcription factor VRN1-like isoform X2 [Benincasa hispida]7.9e-17585.2Show/hide
Query:  MALFSSPNPHFFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLI
        MALFSSPNPHFFKIILHQ LIQQKL++PNKFV NN  SLL++KATL LPDGANW +QLK LDGKICFLRGWPE V+FYS+QPGYFLVFQL+ ICCFNVLI
Subjt:  MALFSSPNPHFFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLI

Query:  FDTSATEIDYPTRRPPILIPKTENEDEEESVQILNQAVLKKRRREKDEEAAAYCSFRETKKIMRKNVKIKIEEHRGFTAPQGF--RDEDEDEDLERNYSR
        FDTSATEIDYPTR P +LIPKTENED EESV+ LN AVLKKR REK+E+  AYCSFRE KK+MRKNVKIKIE+HRGFT  QGF   DEDEDEDLE NYSR
Subjt:  FDTSATEIDYPTRRPPILIPKTENEDEEESVQILNQAVLKKRRREKDEEAAAYCSFRETKKIMRKNVKIKIEEHRGFTAPQGF--RDEDEDEDLERNYSR

Query:  RQSNYRGSAYNERDDGRSSPESMRPLNPRKTPQVLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTGNYLSMPRIFSERYIKESVDVKLEVGDGRGW
        RQS YRGSAYNE DDGR SPE+MRP+NPRKTP VLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTGNYLS+PRIF+ERYIKES+DVKLE+GDGR W
Subjt:  RQSNYRGSAYNERDDGRSSPESMRPLNPRKTPQVLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTGNYLSMPRIFSERYIKESVDVKLEVGDGRGW

Query:  RVWCGVRWAFTRRRTELKSGWKRFAVDNELEEGDICVFELMNKTPKVHFHVTIFRLPS
        RV CGVRWAFTRRRTELK GWKRFAVDNELEEGDICVFEL+NKT KVHFHVTIFRLPS
Subjt:  RVWCGVRWAFTRRRTELKSGWKRFAVDNELEEGDICVFELMNKTPKVHFHVTIFRLPS

TrEMBL top hitse value%identityAlignment
A0A0A0LM04 Uncharacterized protein1.3e-16279.33Show/hide
Query:  MALFSSPNPHFFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLI
        M LF+SPNPHFFKI+LHQ L QQKL++PNKFV NNA SLL+N ATL LPDG+ W  QL +LDGKICFLRGWPE V+FY+VQPGYFLVFQLKGICCFNVLI
Subjt:  MALFSSPNPHFFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLI

Query:  FDTSATEIDYPTRRPPILIPKTENEDEEESVQILNQAVLKKRRR--EKDEEAAAYCSFRETKKIMRKNVKIKIEEHRGFTAPQGFRDEDEDEDLERNYSR
        FDTSATEIDYP RR P+++PK+E++DE ES+QIL++ VLKKRRR  +K++E +AY S RE    M+KN+KIKI + R FT PQGF D+DEDEDLE +YS 
Subjt:  FDTSATEIDYPTRRPPILIPKTENEDEEESVQILNQAVLKKRRR--EKDEEAAAYCSFRETKKIMRKNVKIKIEEHRGFTAPQGFRDEDEDEDLERNYSR

Query:  RQSNYRGSAYNERDDGRSSPESMRPLNPRKTPQVLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTGNYLSMPRIFSERYIKESVDVKLEVGDGRGW
        RQ+NYR S YNER+DGRSSPESMRP+NPRKT QVLTENQLVV+RRA SFKCRT NPSFMVTMRPSYIQTGN LS+PRIFSERYIKESVDVKLEVGDGR W
Subjt:  RQSNYRGSAYNERDDGRSSPESMRPLNPRKTPQVLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTGNYLSMPRIFSERYIKESVDVKLEVGDGRGW

Query:  RVWCGVRWAFTRRRTELKSGWKRFAVDNELEEGDICVFELMNKTPKVHFHVTIFRLPS
        +VWCGVRWAFTRRRTELK GWKRFAVDNELEEGDICVFELMNKTPKVHF VTIFRLPS
Subjt:  RVWCGVRWAFTRRRTELKSGWKRFAVDNELEEGDICVFELMNKTPKVHFHVTIFRLPS

A0A0A0LMR6 Uncharacterized protein2.1e-14977.12Show/hide
Query:  LFSSPNPHFFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLIFD
        LF SPNPHFFK+ILHQTL QQKL++PNKFV NN  SLL+NK TL LPDGANWK+QLKKLDGKICF RGWPE V FYSVQPG+FLVFQLKGICCFNVLIFD
Subjt:  LFSSPNPHFFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLIFD

Query:  TSATEIDYPTRRPPILIPKTENEDEEESVQILNQAVLKKRRREKDEEA-AAYCSFRETKKIMRKNVKIKIEEHRGFTAPQGFRDEDEDEDLERNYSRRQS
        TSATEIDYP RR   LIPK+ NEDEEES+QILN+ VLKKRR EK+EE   AY S R  KK+MRKN K+KI ++RG T+     DEDE  DLE + SRRQS
Subjt:  TSATEIDYPTRRPPILIPKTENEDEEESVQILNQAVLKKRRREKDEEA-AAYCSFRETKKIMRKNVKIKIEEHRGFTAPQGFRDEDEDEDLERNYSRRQS

Query:  NYRGSAYNERDDGRSSPESMRPLNPRKTPQVLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTGNYLSMPRIFSERYIKESVDVKLEVGDGRGWRVW
        N+RG  YNE DDGR SPESMRP+NPRKTP  LTENQL V +RA  FK R NNPSFMVTMRPSYIQTGNYLS+PR F E+YIKESVDVKLEVGDGR WRVW
Subjt:  NYRGSAYNERDDGRSSPESMRPLNPRKTPQVLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTGNYLSMPRIFSERYIKESVDVKLEVGDGRGWRVW

Query:  CGVRWAFTRRRTELKSGWKRFAVDNELEEGDICVFELMNKTPKVHFHVTIFRLP
        CGVRWAFTRRRTELK GWKRFAVDNEL+EGDICVFELM K   V F V IFRLP
Subjt:  CGVRWAFTRRRTELKSGWKRFAVDNELEEGDICVFELMNKTPKVHFHVTIFRLP

A0A1S3C614 B3 domain-containing transcription factor VRN1-like6.8e-16479.28Show/hide
Query:  MALFSSPNPHFFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLI
        M  F SPNPHFFKIILHQ L QQKL++PNKFV NN DSLL+N   L LPDGA W  QL KLDGK CFLRGWPE V FYS+QPGYFLVFQLKGICCFNVLI
Subjt:  MALFSSPNPHFFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLI

Query:  FDTSATEIDYPTRRPPILIPKTENEDEEESVQILNQAVLKKRRR--EKDEEAAAYCSFRETKKIMRKNVKIKIEEHRGFTAPQGF----RDEDEDEDLER
        FDTSATEIDYP RRPP+LIPK+E+EDEEES+ IL++A LKKR+R  +K++E +AYCS R+    M+KN++IKI +HR FT PQ F     DEDEDEDLE 
Subjt:  FDTSATEIDYPTRRPPILIPKTENEDEEESVQILNQAVLKKRRR--EKDEEAAAYCSFRETKKIMRKNVKIKIEEHRGFTAPQGF----RDEDEDEDLER

Query:  NYSRRQSNYRGSAYNERDDGRSSPESMRPLNPRKTPQVLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTGNYLSMPRIFSERYIKESVDVKLEVGD
        NYS RQ+NYRGSAYNE +DGRSSPESMRP+NPRK PQVLTENQLVVLRRA SFKCRT NPSFMVTMRPSYIQTGN LS+PRIFSERYIKES+DVKLEVGD
Subjt:  NYSRRQSNYRGSAYNERDDGRSSPESMRPLNPRKTPQVLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTGNYLSMPRIFSERYIKESVDVKLEVGD

Query:  GRGWRVWCGVRWAFTRRRTELKSGWKRFAVDNELEEGDICVFELMNKTPKVHFHVTIFRLPS
        GR W+VWCGVRWAFTRRRTELK GWKRFAVDNELEEGDICVFEL+NKTPKVHFHVTIFRLP+
Subjt:  GRGWRVWCGVRWAFTRRRTELKSGWKRFAVDNELEEGDICVFELMNKTPKVHFHVTIFRLPS

A0A1S3C6V0 B3 domain-containing transcription factor VRN1-like1.0e-15177.4Show/hide
Query:  LFSSPNPHFFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLIFD
        LFSSPNPHFFK+ILHQTL QQKLE+PNKFV NN  S+L+NK TL LPDGANWK+QLKK DGKI F RGWPE V FYSVQPGYFLVFQLKGICCFNVLIFD
Subjt:  LFSSPNPHFFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLIFD

Query:  TSATEIDYPTRRPPILIPKTENEDEEESVQILNQAVLKKRRREKDEEAAAYCSFRETKKIMRKNVKIKIEEHRGFTAPQGFRDEDEDEDLERNYSRRQSN
        TSATEIDYP R    +IPK+ NEDEEES+QILN+ VLKKRR EK+EE  AY S R  KK+MRKN K+KI ++RG T+     DEDE EDLE + SRRQSN
Subjt:  TSATEIDYPTRRPPILIPKTENEDEEESVQILNQAVLKKRRREKDEEAAAYCSFRETKKIMRKNVKIKIEEHRGFTAPQGFRDEDEDEDLERNYSRRQSN

Query:  YRGSAYNERDDGRSSPESMRPLNPRKTPQVLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTGNYLSMPRIFSERYIKESVDVKLEVGDGRGWRVWC
        +RG+AYNE DDGR SPESMRP+NPRKTP  LTENQL V +RA  FK R NNPSFMVTMRPSYIQTGNYLS+PR F ERYIKESVDVKLEVGDGR WRVWC
Subjt:  YRGSAYNERDDGRSSPESMRPLNPRKTPQVLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTGNYLSMPRIFSERYIKESVDVKLEVGDGRGWRVWC

Query:  GVRWAFTRRRTELKSGWKRFAVDNELEEGDICVFELMNKTPKVHFHVTIFRLPS
        GVRWAFTRRRTELK GWKRFAVDNEL+EGDICVFELM K   V F V IFRLP+
Subjt:  GVRWAFTRRRTELKSGWKRFAVDNELEEGDICVFELMNKTPKVHFHVTIFRLPS

A0A5A7TS22 B3 domain-containing transcription factor VRN1-like1.0e-15177.4Show/hide
Query:  LFSSPNPHFFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLIFD
        LFSSPNPHFFK+ILHQTL QQKLE+PNKFV NN  S+L+NK TL LPDGANWK+QLKK DGKI F RGWPE V FYSVQPGYFLVFQLKGICCFNVLIFD
Subjt:  LFSSPNPHFFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLIFD

Query:  TSATEIDYPTRRPPILIPKTENEDEEESVQILNQAVLKKRRREKDEEAAAYCSFRETKKIMRKNVKIKIEEHRGFTAPQGFRDEDEDEDLERNYSRRQSN
        TSATEIDYP R    +IPK+ NEDEEES+QILN+ VLKKRR EK+EE  AY S R  KK+MRKN K+KI ++RG T+     DEDE EDLE + SRRQSN
Subjt:  TSATEIDYPTRRPPILIPKTENEDEEESVQILNQAVLKKRRREKDEEAAAYCSFRETKKIMRKNVKIKIEEHRGFTAPQGFRDEDEDEDLERNYSRRQSN

Query:  YRGSAYNERDDGRSSPESMRPLNPRKTPQVLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTGNYLSMPRIFSERYIKESVDVKLEVGDGRGWRVWC
        +RG+AYNE DDGR SPESMRP+NPRKTP  LTENQL V +RA  FK R NNPSFMVTMRPSYIQTGNYLS+PR F ERYIKESVDVKLEVGDGR WRVWC
Subjt:  YRGSAYNERDDGRSSPESMRPLNPRKTPQVLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTGNYLSMPRIFSERYIKESVDVKLEVGDGRGWRVWC

Query:  GVRWAFTRRRTELKSGWKRFAVDNELEEGDICVFELMNKTPKVHFHVTIFRLPS
        GVRWAFTRRRTELK GWKRFAVDNEL+EGDICVFELM K   V F V IFRLP+
Subjt:  GVRWAFTRRRTELKSGWKRFAVDNELEEGDICVFELMNKTPKVHFHVTIFRLPS

SwissProt top hitse value%identityAlignment
Q84R27 B3 domain-containing protein At3g189603.1e-1236.79Show/hide
Query:  SPNPHFFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLIFDTSA
        SP   FFK++L  T+  + ++IP +FV     S L    TL  P G    ++LK++  +I F  GW E  + +S++ G+FL+F+ K    F V+IF+ SA
Subjt:  SPNPHFFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLIFDTSA

Query:  TEIDYP
         E  YP
Subjt:  TEIDYP

Q8L3W1 B3 domain-containing transcription factor VRN11.6e-2928.93Show/hide
Query:  PNPHFFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLIFDTSAT
        P P F K+I   T+ +++L +P+KFV+   D L    A L +PDG  W++ L+K D KI F  GW E VD YS++ GY L+F+ +G   F+V IF+ S +
Subjt:  PNPHFFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLIFDTSAT

Query:  EIDYPTRRPPILIPKTENEDEEESVQILNQAVLKKRRREKDEE----AAAYCSFRETKKIMRKNVKIKIEEHRGFTAPQGFRDEDEDEDLERNYSRRQSN
        EI+Y +     L+    N           +A L +   ++D E    ++ Y S      +              FT P    +      + +   R++ N
Subjt:  EIDYPTRRPPILIPKTENEDEEESVQILNQAVLKKRRREKDEE----AAAYCSFRETKKIMRKNVKIKIEEHRGFTAPQGFRDEDEDEDLERNYSRRQSN

Query:  YRGSAYNE---RDDGRSSPESMRPLNPRKTPQVLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTGNYLSMPRIFSERYIKE-SVDVKLEVGDGRGW
              N    RDD   +          +   V  E +   +  A++F+    NP F V +RPSY+  G  + +P  F+E+Y+   S  +K+++ + + W
Subjt:  YRGSAYNE---RDDGRSSPESMRPLNPRKTPQVLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTGNYLSMPRIFSERYIKE-SVDVKLEVGDGRGW

Query:  RVWCGVRWAFTRRRTELKSGWKRFAVDNELEEGDICVFELMNKTPKVHFHVTIFRL
         V C     +   R +   GW  F ++N L EGD+CVFEL+ +T      VT FR+
Subjt:  RVWCGVRWAFTRRRTELKSGWKRFAVDNELEEGDICVFELMNKTPKVHFHVTIFRL

Q9XIB4 B3 domain-containing protein At1g494752.3e-1229.25Show/hide
Query:  FFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLIFDTSATEIDY
        F KIIL   +I++ +++P +FV       L +  TL  P G    +++K++  ++ F +GW E  + +S+  G+FL F  +G  CF V+IFD SA+EI+Y
Subjt:  FFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLIFDTSATEIDY

Query:  P-----TRRPPIL------IPKTENEDEEESVQILNQAVLKKRRREK
        P       R  ++          E+ D++  V  +++ + KK+++ +
Subjt:  P-----TRRPPIL------IPKTENEDEEESVQILNQAVLKKRRREK

Q9XIB5 B3 domain-containing protein REM195.8e-1129.95Show/hide
Query:  GFTAPQGFRDEDEDED---LERNYSRRQSNYRGSAYNER----DDGRSSPESMRPLNPRKTPQVLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTG
        G TA Q F  E + E+   + +   R++ N      N      DD  +  +     + RK      E +  V   A++F+    NP F V +RPSY+  G
Subjt:  GFTAPQGFRDEDEDED---LERNYSRRQSNYRGSAYNER----DDGRSSPESMRPLNPRKTPQVLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTG

Query:  NYLSMPRIFSERYIKE-SVDVKLEVGDGRGWRVWCGVRWAFTRRRTELKSGWKRFAVDNELEEGDICVFELMNKTPKVHFHVTIFRL
          + +P  F+E+Y+   S  +KL++G+ + W V C     +   R +   GW  F ++N + EGD+CVFEL+ +T      VT FR+
Subjt:  NYLSMPRIFSERYIKE-SVDVKLEVGDGRGWRVWCGVRWAFTRRRTELKSGWKRFAVDNELEEGDICVFELMNKTPKVHFHVTIFRL

Q9ZSH7 B3 domain-containing protein At4g015801.1e-1236.79Show/hide
Query:  SPNPHFFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLIFDTSA
        SP   FFK++L  T+  + + IP +FV     S L    TL  P G    ++LK++  +I F  GW E  + +S++ G+FL+F+ K    F V+IF+ SA
Subjt:  SPNPHFFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLIFDTSA

Query:  TEIDYP
         E +YP
Subjt:  TEIDYP

Arabidopsis top hitse value%identityAlignment
AT1G49475.1 AP2/B3-like transcriptional factor family protein1.7e-1329.25Show/hide
Query:  FFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLIFDTSATEIDY
        F KIIL   +I++ +++P +FV       L +  TL  P G    +++K++  ++ F +GW E  + +S+  G+FL F  +G  CF V+IFD SA+EI+Y
Subjt:  FFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLIFDTSATEIDY

Query:  P-----TRRPPIL------IPKTENEDEEESVQILNQAVLKKRRREK
        P       R  ++          E+ D++  V  +++ + KK+++ +
Subjt:  P-----TRRPPIL------IPKTENEDEEESVQILNQAVLKKRRREK

AT1G49480.1 related to vernalization1 14.1e-1229.95Show/hide
Query:  GFTAPQGFRDEDEDED---LERNYSRRQSNYRGSAYNER----DDGRSSPESMRPLNPRKTPQVLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTG
        G TA Q F  E + E+   + +   R++ N      N      DD  +  +     + RK      E +  V   A++F+    NP F V +RPSY+  G
Subjt:  GFTAPQGFRDEDEDED---LERNYSRRQSNYRGSAYNER----DDGRSSPESMRPLNPRKTPQVLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTG

Query:  NYLSMPRIFSERYIKE-SVDVKLEVGDGRGWRVWCGVRWAFTRRRTELKSGWKRFAVDNELEEGDICVFELMNKTPKVHFHVTIFRL
          + +P  F+E+Y+   S  +KL++G+ + W V C     +   R +   GW  F ++N + EGD+CVFEL+ +T      VT FR+
Subjt:  NYLSMPRIFSERYIKE-SVDVKLEVGDGRGWRVWCGVRWAFTRRRTELKSGWKRFAVDNELEEGDICVFELMNKTPKVHFHVTIFRL

AT3G18960.1 AP2/B3-like transcriptional factor family protein2.2e-1336.79Show/hide
Query:  SPNPHFFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLIFDTSA
        SP   FFK++L  T+  + ++IP +FV     S L    TL  P G    ++LK++  +I F  GW E  + +S++ G+FL+F+ K    F V+IF+ SA
Subjt:  SPNPHFFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLIFDTSA

Query:  TEIDYP
         E  YP
Subjt:  TEIDYP

AT3G18990.1 AP2/B3-like transcriptional factor family protein1.1e-3028.93Show/hide
Query:  PNPHFFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLIFDTSAT
        P P F K+I   T+ +++L +P+KFV+   D L    A L +PDG  W++ L+K D KI F  GW E VD YS++ GY L+F+ +G   F+V IF+ S +
Subjt:  PNPHFFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLIFDTSAT

Query:  EIDYPTRRPPILIPKTENEDEEESVQILNQAVLKKRRREKDEE----AAAYCSFRETKKIMRKNVKIKIEEHRGFTAPQGFRDEDEDEDLERNYSRRQSN
        EI+Y +     L+    N           +A L +   ++D E    ++ Y S      +              FT P    +      + +   R++ N
Subjt:  EIDYPTRRPPILIPKTENEDEEESVQILNQAVLKKRRREKDEE----AAAYCSFRETKKIMRKNVKIKIEEHRGFTAPQGFRDEDEDEDLERNYSRRQSN

Query:  YRGSAYNE---RDDGRSSPESMRPLNPRKTPQVLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTGNYLSMPRIFSERYIKE-SVDVKLEVGDGRGW
              N    RDD   +          +   V  E +   +  A++F+    NP F V +RPSY+  G  + +P  F+E+Y+   S  +K+++ + + W
Subjt:  YRGSAYNE---RDDGRSSPESMRPLNPRKTPQVLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTGNYLSMPRIFSERYIKE-SVDVKLEVGDGRGW

Query:  RVWCGVRWAFTRRRTELKSGWKRFAVDNELEEGDICVFELMNKTPKVHFHVTIFRL
         V C     +   R +   GW  F ++N L EGD+CVFEL+ +T      VT FR+
Subjt:  RVWCGVRWAFTRRRTELKSGWKRFAVDNELEEGDICVFELMNKTPKVHFHVTIFRL

AT4G01580.1 AP2/B3-like transcriptional factor family protein7.5e-1436.79Show/hide
Query:  SPNPHFFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLIFDTSA
        SP   FFK++L  T+  + + IP +FV     S L    TL  P G    ++LK++  +I F  GW E  + +S++ G+FL+F+ K    F V+IF+ SA
Subjt:  SPNPHFFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLIFDTSA

Query:  TEIDYP
         E +YP
Subjt:  TEIDYP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTCTTCAGTTCCCCAAATCCCCATTTCTTCAAGATCATTCTCCACCAAACTCTCATCCAACAAAAGCTTGAGATTCCAAACAAGTTCGTCAACAACAATGCCGA
TTCTCTGTTATACAACAAGGCCACTCTCTGCCTTCCCGACGGCGCTAACTGGAAGCTCCAACTCAAGAAATTGGACGGCAAAATCTGTTTCCTCAGAGGCTGGCCGGAAG
TCGTTGACTTTTATTCTGTTCAACCTGGATATTTCCTTGTGTTCCAGTTGAAAGGAATTTGCTGTTTCAATGTCCTCATTTTCGATACTAGCGCTACGGAAATCGATTAT
CCAACGCGCCGGCCGCCGATTCTGATTCCCAAAACCGAAAACGAAGATGAAGAGGAATCTGTTCAGATACTGAATCAGGCGGTTTTGAAGAAGAGAAGAAGAGAGAAAGA
TGAAGAAGCAGCGGCGTATTGTTCGTTCCGAGAGACGAAGAAGATAATGAGGAAGAATGTGAAGATCAAGATCGAGGAGCATCGTGGATTCACTGCGCCTCAAGGATTCA
GAGATGAAGACGAAGATGAAGATCTGGAAAGGAATTACTCACGGAGACAGAGTAATTACAGAGGATCAGCGTATAATGAGAGAGATGACGGAAGATCCAGTCCAGAATCG
ATGAGACCGCTGAATCCACGGAAGACGCCGCAGGTATTGACGGAGAATCAATTGGTAGTTCTGAGGAGAGCGAGATCGTTCAAATGTAGGACGAATAATCCTTCATTCAT
GGTGACGATGAGGCCTTCCTACATCCAAACAGGGAATTACTTGAGCATGCCGAGGATCTTTTCAGAGAGATACATAAAGGAATCGGTGGATGTGAAGCTGGAGGTGGGCG
ACGGGAGGGGTTGGAGAGTGTGGTGCGGCGTCCGGTGGGCGTTCACACGGCGGCGAACGGAATTGAAAAGCGGTTGGAAAAGATTCGCCGTTGATAATGAGTTGGAAGAA
GGAGACATTTGTGTGTTTGAATTGATGAACAAAACCCCCAAAGTTCATTTCCACGTCACCATTTTCCGTCTTCCGAGTCAGTAA
mRNA sequenceShow/hide mRNA sequence
AAAGAGGTGAAAACATCAAAATCCATACAAATGGCTCTCTTCAGTTCCCCAAATCCCCATTTCTTCAAGATCATTCTCCACCAAACTCTCATCCAACAAAAGCTTGAGAT
TCCAAACAAGTTCGTCAACAACAATGCCGATTCTCTGTTATACAACAAGGCCACTCTCTGCCTTCCCGACGGCGCTAACTGGAAGCTCCAACTCAAGAAATTGGACGGCA
AAATCTGTTTCCTCAGAGGCTGGCCGGAAGTCGTTGACTTTTATTCTGTTCAACCTGGATATTTCCTTGTGTTCCAGTTGAAAGGAATTTGCTGTTTCAATGTCCTCATT
TTCGATACTAGCGCTACGGAAATCGATTATCCAACGCGCCGGCCGCCGATTCTGATTCCCAAAACCGAAAACGAAGATGAAGAGGAATCTGTTCAGATACTGAATCAGGC
GGTTTTGAAGAAGAGAAGAAGAGAGAAAGATGAAGAAGCAGCGGCGTATTGTTCGTTCCGAGAGACGAAGAAGATAATGAGGAAGAATGTGAAGATCAAGATCGAGGAGC
ATCGTGGATTCACTGCGCCTCAAGGATTCAGAGATGAAGACGAAGATGAAGATCTGGAAAGGAATTACTCACGGAGACAGAGTAATTACAGAGGATCAGCGTATAATGAG
AGAGATGACGGAAGATCCAGTCCAGAATCGATGAGACCGCTGAATCCACGGAAGACGCCGCAGGTATTGACGGAGAATCAATTGGTAGTTCTGAGGAGAGCGAGATCGTT
CAAATGTAGGACGAATAATCCTTCATTCATGGTGACGATGAGGCCTTCCTACATCCAAACAGGGAATTACTTGAGCATGCCGAGGATCTTTTCAGAGAGATACATAAAGG
AATCGGTGGATGTGAAGCTGGAGGTGGGCGACGGGAGGGGTTGGAGAGTGTGGTGCGGCGTCCGGTGGGCGTTCACACGGCGGCGAACGGAATTGAAAAGCGGTTGGAAA
AGATTCGCCGTTGATAATGAGTTGGAAGAAGGAGACATTTGTGTGTTTGAATTGATGAACAAAACCCCCAAAGTTCATTTCCACGTCACCATTTTCCGTCTTCCGAGTCA
GTAAATTCAACACAAGAATGTTTAGTGTAGTGTTTAATGTTATGTGTTATTGCACTTTTAT
Protein sequenceShow/hide protein sequence
MALFSSPNPHFFKIILHQTLIQQKLEIPNKFVNNNADSLLYNKATLCLPDGANWKLQLKKLDGKICFLRGWPEVVDFYSVQPGYFLVFQLKGICCFNVLIFDTSATEIDY
PTRRPPILIPKTENEDEEESVQILNQAVLKKRRREKDEEAAAYCSFRETKKIMRKNVKIKIEEHRGFTAPQGFRDEDEDEDLERNYSRRQSNYRGSAYNERDDGRSSPES
MRPLNPRKTPQVLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTGNYLSMPRIFSERYIKESVDVKLEVGDGRGWRVWCGVRWAFTRRRTELKSGWKRFAVDNELEE
GDICVFELMNKTPKVHFHVTIFRLPSQ