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Clc02G13860 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G13860
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionSynechocystis YCF37
Genome locationClcChr02:26121514..26122305
RNA-Seq ExpressionClc02G13860
SyntenyClc02G13860
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148045.1 uncharacterized protein LOC101208092 [Cucumis sativus]4.0e-6890.42Show/hide
Query:  MSSTAISPVLQLLQPRCRLNITVRAAAVKSSPESLSASRNRRQTLLFLTTTAMAAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKELE
        M+STAISP LQ+L+PRCRL+ TVRAAAVKS  ESLSASR RRQTLLFLT TA AAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEK LE
Subjt:  MSSTAISPVLQLLQPRCRLNITVRAAAVKSSPESLSASRNRRQTLLFLTTTAMAAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKELE

Query:  TAERGIVTAEQGIVAAERGIETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
        TAERGIVTAE+GI+AAER IETAEKEIETAVNFGALSQAGAVAGAEVVGVL+ATSIVNGILGPEGQS
Subjt:  TAERGIVTAEQGIVAAERGIETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
XP_008457854.1 PREDICTED: uncharacterized protein LOC103497439 [Cucumis melo]4.1e-6588.62Show/hide
Query:  MSSTAISPVLQLLQPRCRLNITVRAAAVKSSPESLSASRNRRQTLLFLTTTAMAAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKELE
        M+STAISP LQ+L+PRCRL+ TVRAAAVK   ESLSASR RRQTLLFLT T  AAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEK LE
Subjt:  MSSTAISPVLQLLQPRCRLNITVRAAAVKSSPESLSASRNRRQTLLFLTTTAMAAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKELE

Query:  TAERGIVTAEQGIVAAERGIETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
        TAERGIVTAE+GI+AAER IETAEKEIETAV+FGALSQAGAVAGAEVVGVL+ATSIVNGILGPEGQS
Subjt:  TAERGIVTAEQGIVAAERGIETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
XP_022928047.1 uncharacterized protein LOC111434949 [Cucurbita moschata]2.8e-6689.16Show/hide
Query:  MSSTAISPVLQLLQPRCRLNITVRAAAVKSSPESLSASRNRRQTLLFLTTTAMAAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKELE
        M+ST ISP+LQ+LQPRCRLNITVRAA+VK  PESLSA+R RRQTLL LT TA AAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEK LE
Subjt:  MSSTAISPVLQLLQPRCRLNITVRAAAVKSSPESLSASRNRRQTLLFLTTTAMAAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKELE

Query:  TAERGIVTAEQGIVAAERGIETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQ
        TAERGIVTAE+GI+ AERGIETAEKEIE+AVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPE Q
Subjt:  TAERGIVTAEQGIVAAERGIETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQ
XP_022971729.1 uncharacterized protein LOC111470397 [Cucurbita maxima]5.7e-6789.22Show/hide
Query:  MSSTAISPVLQLLQPRCRLNITVRAAAVKSSPESLSASRNRRQTLLFLTTTAMAAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKELE
        M+ST ISP+LQ+LQPRCRLNITVRAA+VK  PESLSA+R RRQTLL LT TA AAVVGRENPSMAE+IPLFGLRKKLKKVEEEAEEIVREGFEAAEK LE
Subjt:  MSSTAISPVLQLLQPRCRLNITVRAAAVKSSPESLSASRNRRQTLLFLTTTAMAAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKELE

Query:  TAERGIVTAEQGIVAAERGIETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
        TAERGIVTAE+GI+ AERGIETAEKEIE+AVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
Subjt:  TAERGIVTAEQGIVAAERGIETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
XP_038900735.1 uncharacterized protein LOC120087852 [Benincasa hispida]8.0e-6992.86Show/hide
Query:  MSSTAISPVLQLLQPRCRLNITVRAAAVKSSPESLSASRNRRQTLLFLT-TTAMAAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKEL
        M+STAISPVLQ+L  RCRLNITVRAAAVKS PESLSA R RRQTLLFLT T A AAVVGRENPS+AEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEK L
Subjt:  MSSTAISPVLQLLQPRCRLNITVRAAAVKSSPESLSASRNRRQTLLFLT-TTAMAAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKEL

Query:  ETAERGIVTAEQGIVAAERGIETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
        ETAERGIVTAEQGIVAAERGIETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
Subjt:  ETAERGIVTAEQGIVAAERGIETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
TrEMBL top hitse value%identityAlignment
A0A0A0LJU7 Uncharacterized protein1.9e-6890.42Show/hide
Query:  MSSTAISPVLQLLQPRCRLNITVRAAAVKSSPESLSASRNRRQTLLFLTTTAMAAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKELE
        M+STAISP LQ+L+PRCRL+ TVRAAAVKS  ESLSASR RRQTLLFLT TA AAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEK LE
Subjt:  MSSTAISPVLQLLQPRCRLNITVRAAAVKSSPESLSASRNRRQTLLFLTTTAMAAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKELE

Query:  TAERGIVTAEQGIVAAERGIETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
        TAERGIVTAE+GI+AAER IETAEKEIETAVNFGALSQAGAVAGAEVVGVL+ATSIVNGILGPEGQS
Subjt:  TAERGIVTAEQGIVAAERGIETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
A0A1S3C6G5 uncharacterized protein LOC1034974392.0e-6588.62Show/hide
Query:  MSSTAISPVLQLLQPRCRLNITVRAAAVKSSPESLSASRNRRQTLLFLTTTAMAAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKELE
        M+STAISP LQ+L+PRCRL+ TVRAAAVK   ESLSASR RRQTLLFLT T  AAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEK LE
Subjt:  MSSTAISPVLQLLQPRCRLNITVRAAAVKSSPESLSASRNRRQTLLFLTTTAMAAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKELE

Query:  TAERGIVTAEQGIVAAERGIETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
        TAERGIVTAE+GI+AAER IETAEKEIETAV+FGALSQAGAVAGAEVVGVL+ATSIVNGILGPEGQS
Subjt:  TAERGIVTAEQGIVAAERGIETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
A0A5D3CRC5 Synechocystis YCF372.0e-6588.62Show/hide
Query:  MSSTAISPVLQLLQPRCRLNITVRAAAVKSSPESLSASRNRRQTLLFLTTTAMAAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKELE
        M+STAISP LQ+L+PRCRL+ TVRAAAVK   ESLSASR RRQTLLFLT T  AAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEK LE
Subjt:  MSSTAISPVLQLLQPRCRLNITVRAAAVKSSPESLSASRNRRQTLLFLTTTAMAAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKELE

Query:  TAERGIVTAEQGIVAAERGIETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
        TAERGIVTAE+GI+AAER IETAEKEIETAV+FGALSQAGAVAGAEVVGVL+ATSIVNGILGPEGQS
Subjt:  TAERGIVTAEQGIVAAERGIETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
A0A6J1EIT8 uncharacterized protein LOC1114349491.4e-6689.16Show/hide
Query:  MSSTAISPVLQLLQPRCRLNITVRAAAVKSSPESLSASRNRRQTLLFLTTTAMAAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKELE
        M+ST ISP+LQ+LQPRCRLNITVRAA+VK  PESLSA+R RRQTLL LT TA AAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEK LE
Subjt:  MSSTAISPVLQLLQPRCRLNITVRAAAVKSSPESLSASRNRRQTLLFLTTTAMAAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKELE

Query:  TAERGIVTAEQGIVAAERGIETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQ
        TAERGIVTAE+GI+ AERGIETAEKEIE+AVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPE Q
Subjt:  TAERGIVTAEQGIVAAERGIETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQ
A0A6J1I9D9 uncharacterized protein LOC1114703972.8e-6789.22Show/hide
Query:  MSSTAISPVLQLLQPRCRLNITVRAAAVKSSPESLSASRNRRQTLLFLTTTAMAAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKELE
        M+ST ISP+LQ+LQPRCRLNITVRAA+VK  PESLSA+R RRQTLL LT TA AAVVGRENPSMAE+IPLFGLRKKLKKVEEEAEEIVREGFEAAEK LE
Subjt:  MSSTAISPVLQLLQPRCRLNITVRAAAVKSSPESLSASRNRRQTLLFLTTTAMAAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKELE

Query:  TAERGIVTAEQGIVAAERGIETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
        TAERGIVTAE+GI+ AERGIETAEKEIE+AVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
Subjt:  TAERGIVTAEQGIVAAERGIETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G23670.1 homolog of Synechocystis YCF373.0e-3457.96Show/hide
Query:  LQPRCRLNITVRAAAVKSSPESLSA---SRNRRQTLLFLTTTAMAAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKELETAERGIVTA
        LQ RC     V   A  S+  +LS+   +   R+ LLF + TA   V G +  SMAE+IPLFG+RKKLKK EEEA EIV+EGF       ETAE+G+  A
Subjt:  LQPRCRLNITVRAAAVKSSPESLSA---SRNRRQTLLFLTTTAMAAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKELETAERGIVTA

Query:  EQGIVAAERGIETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQ
        E+G+ AAERG+ETAEKEI TAV+F  L+QAGAV  AE VGVLVATS+VNGILGPE Q
Subjt:  EQGIVAAERGIETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCACAGCAATCTCACCCGTCCTCCAACTCCTCCAACCACGATGTCGATTAAACATCACCGTCCGCGCCGCCGCAGTGAAATCGTCGCCGGAATCTCTCTCCGC
TAGCAGAAATCGGCGACAGACTCTGTTGTTTCTGACGACGACGGCGATGGCGGCGGTCGTGGGGAGAGAGAATCCGTCAATGGCGGAGGACATTCCTCTGTTCGGGCTGA
GGAAGAAACTGAAGAAGGTGGAGGAGGAGGCGGAGGAGATCGTGAGAGAAGGATTCGAGGCAGCGGAGAAAGAACTTGAGACGGCGGAGCGAGGGATTGTGACGGCGGAG
CAGGGGATTGTAGCGGCGGAGAGAGGGATTGAAACGGCGGAAAAAGAAATCGAAACGGCAGTAAATTTCGGAGCGCTTTCTCAGGCCGGGGCAGTCGCCGGAGCGGAGGT
CGTTGGAGTTCTCGTAGCTACGTCGATCGTTAACGGTATTTTGGGTCCTGAAGGGCAGAGTTAA
mRNA sequenceShow/hide mRNA sequence
GGGTATTACGGTACCTAAATTTTAATGAAAGAACGAACCGCTATCATTGAATCATCGTCGTGTTGAAAGGATCAGAAGTTTGCTCTCGAAGTTCACATTACAGAAAAGGC
TATGTCTTCCACAGCAATCTCACCCGTCCTCCAACTCCTCCAACCACGATGTCGATTAAACATCACCGTCCGCGCCGCCGCAGTGAAATCGTCGCCGGAATCTCTCTCCG
CTAGCAGAAATCGGCGACAGACTCTGTTGTTTCTGACGACGACGGCGATGGCGGCGGTCGTGGGGAGAGAGAATCCGTCAATGGCGGAGGACATTCCTCTGTTCGGGCTG
AGGAAGAAACTGAAGAAGGTGGAGGAGGAGGCGGAGGAGATCGTGAGAGAAGGATTCGAGGCAGCGGAGAAAGAACTTGAGACGGCGGAGCGAGGGATTGTGACGGCGGA
GCAGGGGATTGTAGCGGCGGAGAGAGGGATTGAAACGGCGGAAAAAGAAATCGAAACGGCAGTAAATTTCGGAGCGCTTTCTCAGGCCGGGGCAGTCGCCGGAGCGGAGG
TCGTTGGAGTTCTCGTAGCTACGTCGATCGTTAACGGTATTTTGGGTCCTGAAGGGCAGAGTTAAATTAAATGTGTATTTTATGAAATTCAGGATTTTTTTTTTCTTTCT
TTTTACTGCTTTCTTGTGTTTCTAATTATTAATTAACTAAATGTTGTTGTAATATTTGATGAATTATGTAGCTGTAAAAGGTGATGATAAATTTTTCGAACAATTGAAGT
AACTTTACTCAATTTGTTAAAA
Protein sequenceShow/hide protein sequence
MSSTAISPVLQLLQPRCRLNITVRAAAVKSSPESLSASRNRRQTLLFLTTTAMAAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKELETAERGIVTAE
QGIVAAERGIETAEKEIETAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS