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Clc02G14665 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G14665
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionF-box protein CPR30-like
Genome locationClcChr02:27094144..27099885
RNA-Seq ExpressionClc02G14665
SyntenyClc02G14665
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022159408.1 F-box/kelch-repeat protein At3g23880-like [Momordica charantia]8.0e-3251.66Show/hide
Query:  DGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYGCAH---EGSFEMYYQGFYYWWADSMLDKLCPKEGRPNILW
        DG  S  N +GFG DP SRDFKVVR VN+V+ P FF P R EVY L KDRW EIK+P   C H     SF+MY++G YYWWAD+        EG   I+ 
Subjt:  DGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYGCAH---EGSFEMYYQGFYYWWADSMLDKLCPKEGRPNILW

Query:  WFNMSEEVFDHISVPS--QNNNGRYKGMGVLNGSIVLFYHTDPGDEKSFDV
         F+MSEEVF  I VP   +    +Y+ MGV  GSIVLF++    DEK+FD+
Subjt:  WFNMSEEVFDHISVPS--QNNNGRYKGMGVLNGSIVLFYHTDPGDEKSFDV

XP_022935692.1 F-box protein CPR30-like [Cucurbita moschata]2.3e-3147.13Show/hide
Query:  RNVRTLHPSTLPINAQHFFDLFDDGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYGCAH---EGSFEMYYQGF
        R  R L PS L +          DG  S  N +GFG D  SRDFKVVR VN+V+ P +F P R E+Y L KDRW EI++P   C H     SFEMY++G 
Subjt:  RNVRTLHPSTLPINAQHFFDLFDDGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYGCAH---EGSFEMYYQGF

Query:  YYWWADSMLDKLCPKEGRPNILWWFNMSEEVFDHISVPS--QNNNGRYKGMGVLNGSIVLFYHTDPGDEKSFDV
        YYWWAD+        EG   I+  F+MSEEVF  IS+P   +    +Y+ +GVLNGSIVLF +   GDE+ FD+
Subjt:  YYWWADSMLDKLCPKEGRPNILWWFNMSEEVFDHISVPS--QNNNGRYKGMGVLNGSIVLFYHTDPGDEKSFDV

XP_022983805.1 F-box protein CPR1-like [Cucurbita maxima]2.8e-3249.67Show/hide
Query:  DGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYGCAH---EGSFEMYYQGFYYWWADSMLDKLCPKEGRPNILW
        DG  S  N +GFG D  S+DFKVVR VN+V+ P +F P RAE+Y L KDRW EI++P   C H     SFEMY++G YYWWAD+        + +  I+ 
Subjt:  DGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYGCAH---EGSFEMYYQGFYYWWADSMLDKLCPKEGRPNILW

Query:  WFNMSEEVFDHISVPS--QNNNGRYKGMGVLNGSIVLFYHTDPGDEKSFDV
         F+MSEEVF  I VP   +    RY+ MG+LNGSIVLF++   GDE+ FD+
Subjt:  WFNMSEEVFDHISVPS--QNNNGRYKGMGVLNGSIVLFYHTDPGDEKSFDV

XP_023526117.1 F-box protein CPR1-like [Cucurbita pepo subsp. pepo]4.0e-3147.7Show/hide
Query:  RNVRTLHPSTLPINAQHFFDLFDDGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYGCAH---EGSFEMYYQGF
        R  R L PS L +          DG  S  N +GFG D  SRDFKVVR VN+V+ P +F   R E+Y L KDRW EI++P   C H     SFEMY++G 
Subjt:  RNVRTLHPSTLPINAQHFFDLFDDGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYGCAH---EGSFEMYYQGF

Query:  YYWWADSMLDKLCPKEGRPNILWWFNMSEEVFDHISVPS--QNNNGRYKGMGVLNGSIVLFYHTDPGDEKSFDV
        YYWWAD+        EG   I+  F+M+EEVF  ISVP   +    RY+ MGVLNGSIVLF++   GDE+ FD+
Subjt:  YYWWADSMLDKLCPKEGRPNILWWFNMSEEVFDHISVPS--QNNNGRYKGMGVLNGSIVLFYHTDPGDEKSFDV

XP_038906036.1 F-box protein CPR1-like [Benincasa hispida]6.1e-3250.33Show/hide
Query:  DGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYGCAH---EGSFEMYYQGFYYWWADSMLDKLCPKEGRPNILW
        DG  S  N +GFG D  SRDFKVVR V++V+ P +F P R E+Y L KDRW EI++P   C H      FEMY++G YYWWA++        EG   I+ 
Subjt:  DGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYGCAH---EGSFEMYYQGFYYWWADSMLDKLCPKEGRPNILW

Query:  WFNMSEEVFDHISVPS--QNNNGRYKGMGVLNGSIVLFYHTDPGDEKSFDV
         F+MSEEVF  I VP   Q    RY+ +GVLNGSIVLF++   GDE+SFD+
Subjt:  WFNMSEEVFDHISVPS--QNNNGRYKGMGVLNGSIVLFYHTDPGDEKSFDV

TrEMBL top hitse value%identityAlignment
A0A5A7UHP3 F-box protein CPR30-like8.4e-2744.97Show/hide
Query:  DGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYGCAH-EGSFEMYYQGFYYWWADSMLDKLCPKEGRPNILWWF
        D   S  N +GFG D  SRDFKVVR V++V+ P +F P + EVY L K+RW EI++P  G       FE++++G YYWWAD+        +G   I+  F
Subjt:  DGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYGCAH-EGSFEMYYQGFYYWWADSMLDKLCPKEGRPNILWWF

Query:  NMSEEVFDHISVPS--QNNNGRYKGMGVLNGSIVLFYHTDPGDEKSFDV
        +MSEEVF  I VP   Q     Y+ +GVL+G IVLF++   GDE+ FD+
Subjt:  NMSEEVFDHISVPS--QNNNGRYKGMGVLNGSIVLFYHTDPGDEKSFDV

A0A5D3DPY4 F-box protein CPR30-like8.4e-2744.97Show/hide
Query:  DGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYGCAH-EGSFEMYYQGFYYWWADSMLDKLCPKEGRPNILWWF
        DG  S  N +GFG D  SRDFKVVR V++V+ P +F P + EVY L  +RW EI++P  G       FE++++G YYWWAD         +G   I+  F
Subjt:  DGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYGCAH-EGSFEMYYQGFYYWWADSMLDKLCPKEGRPNILWWF

Query:  NMSEEVFDHISVPS--QNNNGRYKGMGVLNGSIVLFYHTDPGDEKSFDV
        +MSEEVF  I VP   Q     Y+ +GVL+G IVLF++   GDE+ FD+
Subjt:  NMSEEVFDHISVPS--QNNNGRYKGMGVLNGSIVLFYHTDPGDEKSFDV

A0A6J1DYQ4 F-box/kelch-repeat protein At3g23880-like3.9e-3251.66Show/hide
Query:  DGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYGCAH---EGSFEMYYQGFYYWWADSMLDKLCPKEGRPNILW
        DG  S  N +GFG DP SRDFKVVR VN+V+ P FF P R EVY L KDRW EIK+P   C H     SF+MY++G YYWWAD+        EG   I+ 
Subjt:  DGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYGCAH---EGSFEMYYQGFYYWWADSMLDKLCPKEGRPNILW

Query:  WFNMSEEVFDHISVPS--QNNNGRYKGMGVLNGSIVLFYHTDPGDEKSFDV
         F+MSEEVF  I VP   +    +Y+ MGV  GSIVLF++    DEK+FD+
Subjt:  WFNMSEEVFDHISVPS--QNNNGRYKGMGVLNGSIVLFYHTDPGDEKSFDV

A0A6J1F6B1 F-box protein CPR30-like1.1e-3147.13Show/hide
Query:  RNVRTLHPSTLPINAQHFFDLFDDGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYGCAH---EGSFEMYYQGF
        R  R L PS L +          DG  S  N +GFG D  SRDFKVVR VN+V+ P +F P R E+Y L KDRW EI++P   C H     SFEMY++G 
Subjt:  RNVRTLHPSTLPINAQHFFDLFDDGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYGCAH---EGSFEMYYQGF

Query:  YYWWADSMLDKLCPKEGRPNILWWFNMSEEVFDHISVPS--QNNNGRYKGMGVLNGSIVLFYHTDPGDEKSFDV
        YYWWAD+        EG   I+  F+MSEEVF  IS+P   +    +Y+ +GVLNGSIVLF +   GDE+ FD+
Subjt:  YYWWADSMLDKLCPKEGRPNILWWFNMSEEVFDHISVPS--QNNNGRYKGMGVLNGSIVLFYHTDPGDEKSFDV

A0A6J1J6Y5 F-box protein CPR1-like1.3e-3249.67Show/hide
Query:  DGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYGCAH---EGSFEMYYQGFYYWWADSMLDKLCPKEGRPNILW
        DG  S  N +GFG D  S+DFKVVR VN+V+ P +F P RAE+Y L KDRW EI++P   C H     SFEMY++G YYWWAD+        + +  I+ 
Subjt:  DGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYGCAH---EGSFEMYYQGFYYWWADSMLDKLCPKEGRPNILW

Query:  WFNMSEEVFDHISVPS--QNNNGRYKGMGVLNGSIVLFYHTDPGDEKSFDV
         F+MSEEVF  I VP   +    RY+ MG+LNGSIVLF++   GDE+ FD+
Subjt:  WFNMSEEVFDHISVPS--QNNNGRYKGMGVLNGSIVLFYHTDPGDEKSFDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G16210.1 F-box family protein4.4e-0421.37Show/hide
Query:  GVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYGCAHEGSFEMYYQGFYYWWADSMLDKLCPKEGRPNILWWFNM
        G++   N +GFG DP+  D+KVV  ++ +D  +      A V+  R   W E     Y   H       +   Y +W       +  +      +  FN+
Subjt:  GVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYGCAHEGSFEMYYQGFYYWWADSMLDKLCPKEGRPNILWWFNM

Query:  SEEVFDHISVPSQNNNGRYKGMGVLNGSIVL
        S   +  + +P  N       +GV +  + +
Subjt:  SEEVFDHISVPSQNNNGRYKGMGVLNGSIVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAATAGAAATGTCCGTACACTCCACCCCTCCACTCTTCCCATCAATGCACAACACTTCTTCGATCTCTTTGACGATGGTGTTCATTCCTACCCTAACACCATTGG
ATTCGGGGACGATCCGATATCTAGGGATTTCAAGGTGGTTAGGGATGTGAATTATGTGGATCCCCCTTCTTTTTTTCGCCCTCTGAGGGCTGAAGTGTACCATTTAAGGA
AAGATCGATGGGATGAAATCAAATCCCCTTTCTATGGTTGTGCTCATGAGGGTTCCTTTGAAATGTATTATCAAGGATTCTATTATTGGTGGGCTGATTCTATGCTAGAT
AAACTCTGTCCTAAAGAAGGAAGACCTAATATTTTATGGTGGTTCAACATGAGCGAGGAGGTTTTTGACCACATTTCGGTACCTTCCCAGAATAACAATGGGAGGTACAA
AGGCATGGGGGTTTTGAATGGTTCTATTGTGCTGTTTTATCATACAGACCCTGGGGATGAAAAAAGCTTCGACGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACAAATAGAAATGTCCGTACACTCCACCCCTCCACTCTTCCCATCAATGCACAACACTTCTTCGATCTCTTTGACGATGGTGTTCATTCCTACCCTAACACCATTGG
ATTCGGGGACGATCCGATATCTAGGGATTTCAAGGTGGTTAGGGATGTGAATTATGTGGATCCCCCTTCTTTTTTTCGCCCTCTGAGGGCTGAAGTGTACCATTTAAGGA
AAGATCGATGGGATGAAATCAAATCCCCTTTCTATGGTTGTGCTCATGAGGGTTCCTTTGAAATGTATTATCAAGGATTCTATTATTGGTGGGCTGATTCTATGCTAGAT
AAACTCTGTCCTAAAGAAGGAAGACCTAATATTTTATGGTGGTTCAACATGAGCGAGGAGGTTTTTGACCACATTTCGGTACCTTCCCAGAATAACAATGGGAGGTACAA
AGGCATGGGGGTTTTGAATGGTTCTATTGTGCTGTTTTATCATACAGACCCTGGGGATGAAAAAAGCTTCGACGTTTAG
Protein sequenceShow/hide protein sequence
MTNRNVRTLHPSTLPINAQHFFDLFDDGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYGCAHEGSFEMYYQGFYYWWADSMLD
KLCPKEGRPNILWWFNMSEEVFDHISVPSQNNNGRYKGMGVLNGSIVLFYHTDPGDEKSFDV