; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G14700 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G14700
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
Genome locationClcChr02:27234732..27236964
RNA-Seq ExpressionClc02G14700
SyntenyClc02G14700
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143608.1 probable RNA-binding protein ARP1 isoform X1 [Cucumis sativus]6.3e-13293.73Show/hide
Query:  MTMM--SSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
        MTMM  ++NN+N++ NAGLFGDTTLTKVFVGGLAWETPKEAMRDHF KFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
Subjt:  MTMM--SSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL

Query:  ASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
        ASLGARRGGSRSASATPPQ PQPGSN GGPRTTS A APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
Subjt:  ASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ

Query:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFATVPPTSIMSKPASV
        AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFA VPPTSIMSKP +V
Subjt:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFATVPPTSIMSKPASV

XP_008445853.2 PREDICTED: probable RNA-binding protein ARP1 isoform X2 [Cucumis melo]5.9e-13093.31Show/hide
Query:  MTMMSSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS
        MTMM++  ++NT NAGLFGDTTLTKVFVGGLAWETPKEAMRDHF+KFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS
Subjt:  MTMMSSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS

Query:  LGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ-A
        LGARRGGSRSASATPPQ PQPGSNGGGPRTT+ A APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY+NGHYTQMYPGQ A
Subjt:  LGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ-A

Query:  MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFATVPPTSIMSKPASV
        MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFA VPPTSIMSKP +V
Subjt:  MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFATVPPTSIMSKPASV

XP_011654915.1 probable RNA-binding protein ARP1 isoform X2 [Cucumis sativus]6.3e-13293.73Show/hide
Query:  MTMM--SSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
        MTMM  ++NN+N++ NAGLFGDTTLTKVFVGGLAWETPKEAMRDHF KFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
Subjt:  MTMM--SSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL

Query:  ASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
        ASLGARRGGSRSASATPPQ PQPGSN GGPRTTS A APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
Subjt:  ASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ

Query:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFATVPPTSIMSKPASV
        AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFA VPPTSIMSKP +V
Subjt:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFATVPPTSIMSKPASV

XP_038891949.1 probable RNA-binding protein ARP1 isoform X1 [Benincasa hispida]3.9e-13495.26Show/hide
Query:  MTMMSSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS
        MTMMS+  ++N NNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS
Subjt:  MTMMSSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS

Query:  LGARRGGSRSASATPPQGPQPGSNGGGPRTTS-PAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQAM
        LGARRGGSRSASATPPQ PQPGSNGGGPRTTS  A PGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQAM
Subjt:  LGARRGGSRSASATPPQGPQPGSNGGGPRTTS-PAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQAM

Query:  VGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFATVPPTSIMSKPASV
        VGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFA VPP+SIMSKPASV
Subjt:  VGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFATVPPTSIMSKPASV

XP_038891950.1 probable RNA-binding protein ARP1 isoform X2 [Benincasa hispida]3.9e-13495.26Show/hide
Query:  MTMMSSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS
        MTMMS+  ++N NNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS
Subjt:  MTMMSSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS

Query:  LGARRGGSRSASATPPQGPQPGSNGGGPRTTS-PAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQAM
        LGARRGGSRSASATPPQ PQPGSNGGGPRTTS  A PGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQAM
Subjt:  LGARRGGSRSASATPPQGPQPGSNGGGPRTTS-PAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQAM

Query:  VGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFATVPPTSIMSKPASV
        VGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFA VPP+SIMSKPASV
Subjt:  VGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFATVPPTSIMSKPASV

TrEMBL top hitse value%identityAlignment
A0A0A0KNL6 RRM domain-containing protein3.0e-13293.73Show/hide
Query:  MTMM--SSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
        MTMM  ++NN+N++ NAGLFGDTTLTKVFVGGLAWETPKEAMRDHF KFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
Subjt:  MTMM--SSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL

Query:  ASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
        ASLGARRGGSRSASATPPQ PQPGSN GGPRTTS A APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
Subjt:  ASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ

Query:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFATVPPTSIMSKPASV
        AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFA VPPTSIMSKP +V
Subjt:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFATVPPTSIMSKPASV

A0A1S3BD62 probable RNA-binding protein ARP1 isoform X22.9e-13093.31Show/hide
Query:  MTMMSSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS
        MTMM++  ++NT NAGLFGDTTLTKVFVGGLAWETPKEAMRDHF+KFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS
Subjt:  MTMMSSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS

Query:  LGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ-A
        LGARRGGSRSASATPPQ PQPGSNGGGPRTT+ A APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY+NGHYTQMYPGQ A
Subjt:  LGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ-A

Query:  MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFATVPPTSIMSKPASV
        MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFA VPPTSIMSKP +V
Subjt:  MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFATVPPTSIMSKPASV

A0A1S3BEI0 probable RNA-binding protein ARP1 isoform X12.9e-13093.31Show/hide
Query:  MTMMSSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS
        MTMM++  ++NT NAGLFGDTTLTKVFVGGLAWETPKEAMRDHF+KFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS
Subjt:  MTMMSSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS

Query:  LGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ-A
        LGARRGGSRSASATPPQ PQPGSNGGGPRTT+ A APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY+NGHYTQMYPGQ A
Subjt:  LGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ-A

Query:  MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFATVPPTSIMSKPASV
        MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFA VPPTSIMSKP +V
Subjt:  MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFATVPPTSIMSKPASV

A0A5A7SY01 Putative RNA-binding protein ARP1 isoform X18.3e-13092.91Show/hide
Query:  MTMMSSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS
        MTMM++  ++NT NAGLFGDTTLTKVFVGGLAWETPKEAMRDHF+KFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS
Subjt:  MTMMSSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS

Query:  LGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ-A
        LGARRGGSRSASATPPQ PQPGSNGGGPRTT+ A APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY+NGHYTQMYPGQ A
Subjt:  LGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ-A

Query:  MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFATVPPTSIMSKPASV
        MVG NTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFA VPPTSIMSKP +V
Subjt:  MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFATVPPTSIMSKPASV

A0A6J1FUE8 probable RNA-binding protein ARP1 isoform X11.6e-12084.06Show/hide
Query:  NTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRS
        + NNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARR GSRS
Subjt:  NTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRS

Query:  ASATPPQGPQ-PGSNGGGPRTTSPAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQAMVGANTLMPMY
        ASATPPQ PQ PGSNGGGPRTTS A  GNHVQWYYPAGT+PT F HQPHQ VPFYGYSPSPTYIATDISYNHK+GYMNGHY Q+YPGQAMVGANTLMPMY
Subjt:  ASATPPQGPQ-PGSNGGGPRTTSPAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQAMVGANTLMPMY

Query:  PLYHYHQSHAMGMPAHIFPPSPTTAGPFATVPPTSIMSKPASV--------------QLEEDAGDDDDGKRRAEKN
        PLYHYHQSHAMGMPAHI+PPSPT     A VPP+SIMSKPASV              + EE+  DD+DGKRRA+KN
Subjt:  PLYHYHQSHAMGMPAHIFPPSPTTAGPFATVPPTSIMSKPASV--------------QLEEDAGDDDDGKRRAEKN

SwissProt top hitse value%identityAlignment
Q5ZJX4 RNA-binding protein 383.2e-2257.65Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +FE FG+I EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR

Q6GQD3 RNA-binding protein 24-A4.2e-2257.65Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +FE FG+I EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR

Q9BX46 RNA-binding protein 242.5e-2258.82Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +FE FGEI EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR

Q9I8B3 RNA-binding protein 24-B4.2e-2257.65Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +FE FG+I EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR

Q9M1S3 Probable RNA-binding protein ARP13.1e-5753.38Show/hide
Query:  SNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGS
        SNN N  G FGDT LTKVFVGGLAW+T KEAM DHF K+G+ILEAVIISDKLT RSKGYGFVTFKDA++A +ACEDS PIINGRRANCNLASLG R   S
Subjt:  SNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGS

Query:  RSASATPPQGPQPGSNGGGPRTTSPAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG-----YMNGHYTQMYP--------
         + + +P QGP+ G+        +P   GNH QWYYP+G        Q HQ VPFYGY PS  Y+A ++++N K+G     YMNG+Y QM P        
Subjt:  RSASATPPQGPQPGSNGGGPRTTSPAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG-----YMNGHYTQMYP--------

Query:  ----------GQAMVG-ANTLMPMYPLYHYHQSHAMGMPAHIF--PPSPTTAGPFATVPPTSIMSK
                  G+ MVG A+ ++P Y +Y YHQS A+G P   F  P S +T     TV   SI  K
Subjt:  ----------GQAMVG-ANTLMPMYPLYHYHQSHAMGMPAHIF--PPSPTTAGPFATVPPTSIMSK

Arabidopsis top hitse value%identityAlignment
AT1G22910.1 RNA-binding (RRM/RBD/RNP motifs) family protein9.6e-3843.22Show/hide
Query:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQG
        GDTT TKVFVGGLAWET KE M+ HFE+FGEILEAV+I+DK +GRSKGYGFVTF++AE+A+ AC D+ P+I+GRRANCNLASLG +    RS  +TP   
Subjt:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQG

Query:  PQPGSNGGGPRTTSPAAPGNHVQWYY--PAGTHPTPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGANTLMPMY
            ++GGG R  +     + +Q  +  P    P  F H PH P+  +GYSP SP Y +   +     G  +G    +Y       G     A +  P Y
Subjt:  PQPGSNGGGPRTTSPAAPGNHVQWYY--PAGTHPTPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGANTLMPMY

Query:  ---------------PLYHYHQSHAMGMPAHIFPPS
                       P YH+  S+    P H  PP+
Subjt:  ---------------PLYHYHQSHAMGMPAHIFPPS

AT1G22910.2 RNA-binding (RRM/RBD/RNP motifs) family protein9.6e-3843.22Show/hide
Query:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQG
        GDTT TKVFVGGLAWET KE M+ HFE+FGEILEAV+I+DK +GRSKGYGFVTF++AE+A+ AC D+ P+I+GRRANCNLASLG +    RS  +TP   
Subjt:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQG

Query:  PQPGSNGGGPRTTSPAAPGNHVQWYY--PAGTHPTPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGANTLMPMY
            ++GGG R  +     + +Q  +  P    P  F H PH P+  +GYSP SP Y +   +     G  +G    +Y       G     A +  P Y
Subjt:  PQPGSNGGGPRTTSPAAPGNHVQWYY--PAGTHPTPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGANTLMPMY

Query:  ---------------PLYHYHQSHAMGMPAHIFPPS
                       P YH+  S+    P H  PP+
Subjt:  ---------------PLYHYHQSHAMGMPAHIFPPS

AT1G22910.3 RNA-binding (RRM/RBD/RNP motifs) family protein9.6e-3843.22Show/hide
Query:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQG
        GDTT TKVFVGGLAWET KE M+ HFE+FGEILEAV+I+DK +GRSKGYGFVTF++AE+A+ AC D+ P+I+GRRANCNLASLG +    RS  +TP   
Subjt:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQG

Query:  PQPGSNGGGPRTTSPAAPGNHVQWYY--PAGTHPTPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGANTLMPMY
            ++GGG R  +     + +Q  +  P    P  F H PH P+  +GYSP SP Y +   +     G  +G    +Y       G     A +  P Y
Subjt:  PQPGSNGGGPRTTSPAAPGNHVQWYY--PAGTHPTPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGANTLMPMY

Query:  ---------------PLYHYHQSHAMGMPAHIFPPS
                       P YH+  S+    P H  PP+
Subjt:  ---------------PLYHYHQSHAMGMPAHIFPPS

AT3G54770.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.2e-5853.38Show/hide
Query:  SNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGS
        SNN N  G FGDT LTKVFVGGLAW+T KEAM DHF K+G+ILEAVIISDKLT RSKGYGFVTFKDA++A +ACEDS PIINGRRANCNLASLG R   S
Subjt:  SNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGS

Query:  RSASATPPQGPQPGSNGGGPRTTSPAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG-----YMNGHYTQMYP--------
         + + +P QGP+ G+        +P   GNH QWYYP+G        Q HQ VPFYGY PS  Y+A ++++N K+G     YMNG+Y QM P        
Subjt:  RSASATPPQGPQPGSNGGGPRTTSPAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG-----YMNGHYTQMYP--------

Query:  ----------GQAMVG-ANTLMPMYPLYHYHQSHAMGMPAHIF--PPSPTTAGPFATVPPTSIMSK
                  G+ MVG A+ ++P Y +Y YHQS A+G P   F  P S +T     TV   SI  K
Subjt:  ----------GQAMVG-ANTLMPMYPLYHYHQSHAMGMPAHIF--PPSPTTAGPFATVPPTSIMSK

AT3G54770.2 RNA-binding (RRM/RBD/RNP motifs) family protein4.0e-4448.94Show/hide
Query:  MRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPAAPGNH
        M DHF K+G+ILEAVIISDKLT RSKGYGFVTFKDA++A +ACEDS PIINGRRANCNLASLG R        ATPP                    GNH
Subjt:  MRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPAAPGNH

Query:  VQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG-----YMNGHYTQMYP------------------GQAMVG-ANTLMPMYPLYHYH
         QWYYP+G        Q HQ VPFYGY PS  Y+A ++++N K+G     YMNG+Y QM P                  G+ MVG A+ ++P Y +Y YH
Subjt:  VQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG-----YMNGHYTQMYP------------------GQAMVG-ANTLMPMYPLYHYH

Query:  QSHAMGMPAHIF--PPSPTTAGPFATVPPTSIMSK
        QS A+G P   F  P S +T     TV   SI  K
Subjt:  QSHAMGMPAHIF--PPSPTTAGPFATVPPTSIMSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCATGATGAGCAGCAACAACAGCAATAATACTAATAATGCAGGTTTGTTCGGCGACACGACGTTGACGAAGGTCTTCGTTGGGGGATTAGCTTGGGAGACTCCAAA
GGAAGCCATGAGAGATCACTTCGAGAAGTTTGGTGAGATTCTGGAGGCGGTTATCATTTCCGATAAACTCACTGGCAGATCCAAGGGCTATGGATTCGTTACATTCAAGG
ACGCGGAATCGGCGAAGAAAGCTTGTGAGGATTCCGCTCCGATCATCAATGGCCGTCGAGCTAACTGTAATCTGGCTTCGCTTGGAGCTCGGCGCGGCGGCTCTAGGTCG
GCTTCGGCTACTCCTCCGCAAGGTCCTCAACCAGGATCCAACGGTGGAGGACCGAGGACGACGTCACCAGCCGCACCGGGAAATCATGTGCAGTGGTACTACCCCGCGGG
GACTCATCCCACGCCGTTTCATCATCAGCCTCATCAGCCCGTCCCTTTCTATGGATACTCCCCAAGCCCCACTTACATCGCCACCGATATCAGTTACAACCACAAACTGG
GGTATATGAACGGCCATTACACGCAGATGTATCCGGGCCAAGCTATGGTAGGGGCGAACACATTGATGCCAATGTACCCGCTCTATCATTACCATCAATCACACGCCATG
GGGATGCCGGCCCACATTTTCCCTCCTAGTCCCACCACTGCGGGCCCATTCGCCACGGTCCCACCCACTTCTATAATGTCCAAACCAGCCTCTGTACAGTTGGAGGAGGA
TGCAGGGGATGATGATGATGGTAAAAGAAGAGCAGAGAAGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACCATGATGAGCAGCAACAACAGCAATAATACTAATAATGCAGGTTTGTTCGGCGACACGACGTTGACGAAGGTCTTCGTTGGGGGATTAGCTTGGGAGACTCCAAA
GGAAGCCATGAGAGATCACTTCGAGAAGTTTGGTGAGATTCTGGAGGCGGTTATCATTTCCGATAAACTCACTGGCAGATCCAAGGGCTATGGATTCGTTACATTCAAGG
ACGCGGAATCGGCGAAGAAAGCTTGTGAGGATTCCGCTCCGATCATCAATGGCCGTCGAGCTAACTGTAATCTGGCTTCGCTTGGAGCTCGGCGCGGCGGCTCTAGGTCG
GCTTCGGCTACTCCTCCGCAAGGTCCTCAACCAGGATCCAACGGTGGAGGACCGAGGACGACGTCACCAGCCGCACCGGGAAATCATGTGCAGTGGTACTACCCCGCGGG
GACTCATCCCACGCCGTTTCATCATCAGCCTCATCAGCCCGTCCCTTTCTATGGATACTCCCCAAGCCCCACTTACATCGCCACCGATATCAGTTACAACCACAAACTGG
GGTATATGAACGGCCATTACACGCAGATGTATCCGGGCCAAGCTATGGTAGGGGCGAACACATTGATGCCAATGTACCCGCTCTATCATTACCATCAATCACACGCCATG
GGGATGCCGGCCCACATTTTCCCTCCTAGTCCCACCACTGCGGGCCCATTCGCCACGGTCCCACCCACTTCTATAATGTCCAAACCAGCCTCTGTACAGTTGGAGGAGGA
TGCAGGGGATGATGATGATGGTAAAAGAAGAGCAGAGAAGAATTAA
Protein sequenceShow/hide protein sequence
MTMMSSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRS
ASATPPQGPQPGSNGGGPRTTSPAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQAMVGANTLMPMYPLYHYHQSHAM
GMPAHIFPPSPTTAGPFATVPPTSIMSKPASVQLEEDAGDDDDGKRRAEKN