; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G14930 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G14930
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionDUF4283 domain-containing protein
Genome locationClcChr02:27481138..27481617
RNA-Seq ExpressionClc02G14930
SyntenyClc02G14930
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034059.1 hypothetical protein E6C27_scaffold65G00450 [Cucumis melo var. makuwa]8.3e-2153.33Show/hide
Query:  MPRLCSKKMLCWNFRGKDNAKLIRALNDLIQLHNPSIMLVFGSKISSTDADQ----------------------------QDVQIEVSSYIPQKVSVSVH
        MP LC KKMLCWNFRG D AKLI+A   LI+L  PSI+L+FGSKISS DA++                            QDV+IEVSSY PQKVS SV+
Subjt:  MPRLCSKKMLCWNFRGKDNAKLIRALNDLIQLHNPSIMLVFGSKISSTDADQ----------------------------QDVQIEVSSYIPQKVSVSVH

Query:  FHSKHNESALCLLNEDTNTS
        F SK NE  + LL+EDT TS
Subjt:  FHSKHNESALCLLNEDTNTS

KAA0034060.1 hypothetical protein E6C27_scaffold65G00460 [Cucumis melo var. makuwa]2.0e-2250.36Show/hide
Query:  MPRLCSKKMLCWNFRGKDNAKLIRALNDLIQLHNPSIMLVFGSKISSTDADQ----------------------------QDVQIEVSSYIPQKVSVSVH
        MP LCSKKMLCWNF GKD A L +AL DLI LH PSI+L+FGSKISS+DAD+                            QDVQ EV+S   QKV  SVH
Subjt:  MPRLCSKKMLCWNFRGKDNAKLIRALNDLIQLHNPSIMLVFGSKISSTDADQ----------------------------QDVQIEVSSYIPQKVSVSVH

Query:  FHSKHNESALCLLNEDTNTSPRPWGPNFFFASTRLMD
        FH K NE             P  WG  FF+ASTRLMD
Subjt:  FHSKHNESALCLLNEDTNTSPRPWGPNFFFASTRLMD

KAA0034062.1 uncharacterized protein E6C27_scaffold65G00480 [Cucumis melo var. makuwa]2.8e-2146.21Show/hide
Query:  CSKKMLCWNFRGKDNAKLIRALNDLIQLHNPSIMLVFGSKISSTDA----------------------------DQQDVQIEVSSYIPQKVSVSVHFHSK
        C+KKML W F   DNAKL+RAL DLIQLH PSI+L+FG+KI+  DA                             +QDVQ +V+SY PQ+VS SV FHS+
Subjt:  CSKKMLCWNFRGKDNAKLIRALNDLIQLHNPSIMLVFGSKISSTDA----------------------------DQQDVQIEVSSYIPQKVSVSVHFHSK

Query:  HNESALCLLNEDTNTSPRPWGPNFFFASTRLM
         N       N DT TS  PWG  FF+ ST  M
Subjt:  HNESALCLLNEDTNTSPRPWGPNFFFASTRLM

KAG6600114.1 hypothetical protein SDJN03_05347, partial [Cucurbita argyrosperma subsp. sororia]3.0e-2347.76Show/hide
Query:  CSKKMLCWNFRGKDNAKLIRALNDLIQLHNPSIMLVFGSKISSTDAD----------------------------QQDVQIEVSSYIPQKVSVSVHFHSK
        CSKKMLCW F G DNA L++AL DLIQLH PSI+L+FG+KIS  +A+                            +QDVQIEV SY PQ+VS SV+F S 
Subjt:  CSKKMLCWNFRGKDNAKLIRALNDLIQLHNPSIMLVFGSKISSTDAD----------------------------QQDVQIEVSSYIPQKVSVSVHFHSK

Query:  HNESALCLLNEDTNTSPRPWGPNFFFASTRLMDN
         N  A    N DT TS  PWG  FF+ ST  M +
Subjt:  HNESALCLLNEDTNTSPRPWGPNFFFASTRLMDN

KAG7030785.1 hypothetical protein SDJN02_04822, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-2347.76Show/hide
Query:  CSKKMLCWNFRGKDNAKLIRALNDLIQLHNPSIMLVFGSKISSTDAD----------------------------QQDVQIEVSSYIPQKVSVSVHFHSK
        CSKKMLCW F G DNA L++AL DLIQLH PSI+L+FG+KIS  +A+                            +QDVQIEV SY PQ+VS SV+F S 
Subjt:  CSKKMLCWNFRGKDNAKLIRALNDLIQLHNPSIMLVFGSKISSTDAD----------------------------QQDVQIEVSSYIPQKVSVSVHFHSK

Query:  HNESALCLLNEDTNTSPRPWGPNFFFASTRLMDN
         N  A    N DT TS  PWG  FF+ ST  M +
Subjt:  HNESALCLLNEDTNTSPRPWGPNFFFASTRLMDN

TrEMBL top hitse value%identityAlignment
A0A0A0KLB0 DUF4283 domain-containing protein5.8e-2044.7Show/hide
Query:  CSKKMLCWNFRGKDNAKLIRALNDLIQLHNPSIMLVFGSKISSTDAD----------------------------QQDVQIEVSSYIPQKVSVSVHFHSK
        C+KK+L W F   DNAKL+RAL DLIQLH PSI+L+FG+KIS  D D                            +QDVQ +V+S+  Q+VS SV FHS+
Subjt:  CSKKMLCWNFRGKDNAKLIRALNDLIQLHNPSIMLVFGSKISSTDAD----------------------------QQDVQIEVSSYIPQKVSVSVHFHSK

Query:  HNESALCLLNEDTNTSPRPWGPNFFFASTRLM
         N       N DT TS  PWG  FF+ ST  M
Subjt:  HNESALCLLNEDTNTSPRPWGPNFFFASTRLM

A0A5A7SSJ3 DUF4283 domain-containing protein1.4e-2146.21Show/hide
Query:  CSKKMLCWNFRGKDNAKLIRALNDLIQLHNPSIMLVFGSKISSTDA----------------------------DQQDVQIEVSSYIPQKVSVSVHFHSK
        C+KKML W F   DNAKL+RAL DLIQLH PSI+L+FG+KI+  DA                             +QDVQ +V+SY PQ+VS SV FHS+
Subjt:  CSKKMLCWNFRGKDNAKLIRALNDLIQLHNPSIMLVFGSKISSTDA----------------------------DQQDVQIEVSSYIPQKVSVSVHFHSK

Query:  HNESALCLLNEDTNTSPRPWGPNFFFASTRLM
         N       N DT TS  PWG  FF+ ST  M
Subjt:  HNESALCLLNEDTNTSPRPWGPNFFFASTRLM

A0A5A7SSW6 DUF4283 domain-containing protein9.5e-2350.36Show/hide
Query:  MPRLCSKKMLCWNFRGKDNAKLIRALNDLIQLHNPSIMLVFGSKISSTDADQ----------------------------QDVQIEVSSYIPQKVSVSVH
        MP LCSKKMLCWNF GKD A L +AL DLI LH PSI+L+FGSKISS+DAD+                            QDVQ EV+S   QKV  SVH
Subjt:  MPRLCSKKMLCWNFRGKDNAKLIRALNDLIQLHNPSIMLVFGSKISSTDADQ----------------------------QDVQIEVSSYIPQKVSVSVH

Query:  FHSKHNESALCLLNEDTNTSPRPWGPNFFFASTRLMD
        FH K NE             P  WG  FF+ASTRLMD
Subjt:  FHSKHNESALCLLNEDTNTSPRPWGPNFFFASTRLMD

A0A5A7SY10 DUF4283 domain-containing protein4.0e-2153.33Show/hide
Query:  MPRLCSKKMLCWNFRGKDNAKLIRALNDLIQLHNPSIMLVFGSKISSTDADQ----------------------------QDVQIEVSSYIPQKVSVSVH
        MP LC KKMLCWNFRG D AKLI+A   LI+L  PSI+L+FGSKISS DA++                            QDV+IEVSSY PQKVS SV+
Subjt:  MPRLCSKKMLCWNFRGKDNAKLIRALNDLIQLHNPSIMLVFGSKISSTDADQ----------------------------QDVQIEVSSYIPQKVSVSVH

Query:  FHSKHNESALCLLNEDTNTS
        F SK NE  + LL+EDT TS
Subjt:  FHSKHNESALCLLNEDTNTS

A0A6J1FN13 uncharacterized protein LOC111446932 isoform X27.6e-2054.72Show/hide
Query:  CSKKMLCWNFRGKDNAKLIRALNDLIQLHNPSIMLVFGSKISSTDAD----------------------------QQDVQIEVSSYIPQKVSVSVHFHSK
        CSKKMLCWNFR  DNAKL+RAL DLIQLH PSI+L+FG+KIS  DAD                            QQDVQIEVSSY PQ+VS SV  HSK
Subjt:  CSKKMLCWNFRGKDNAKLIRALNDLIQLHNPSIMLVFGSKISSTDAD----------------------------QQDVQIEVSSYIPQKVSVSVHFHSK

Query:  HNESAL
         N++ +
Subjt:  HNESAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTAGATTGTGTTCTAAGAAAATGTTGTGCTGGAATTTTCGTGGGAAGGACAATGCTAAGCTAATACGAGCATTGAATGATCTGATTCAACTACACAATCCATCCAT
TATGTTGGTCTTTGGCTCCAAGATCAGCAGTACTGATGCGGACCAGCAAGATGTACAAATTGAAGTCAGTTCCTATATTCCACAGAAGGTTTCTGTATCAGTGCATTTCC
ATTCTAAACACAATGAATCAGCGCTATGTCTTTTGAATGAAGATACCAATACATCACCGCGACCGTGGGGACCGAATTTCTTCTTTGCTTCAACAAGGTTGATGGATAAC
ACAATTGTCGTACTCATGGGAGAAGTTAAAGAAGCATTAGACACCACCATCTTCCTAGTAATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTAGATTGTGTTCTAAGAAAATGTTGTGCTGGAATTTTCGTGGGAAGGACAATGCTAAGCTAATACGAGCATTGAATGATCTGATTCAACTACACAATCCATCCAT
TATGTTGGTCTTTGGCTCCAAGATCAGCAGTACTGATGCGGACCAGCAAGATGTACAAATTGAAGTCAGTTCCTATATTCCACAGAAGGTTTCTGTATCAGTGCATTTCC
ATTCTAAACACAATGAATCAGCGCTATGTCTTTTGAATGAAGATACCAATACATCACCGCGACCGTGGGGACCGAATTTCTTCTTTGCTTCAACAAGGTTGATGGATAAC
ACAATTGTCGTACTCATGGGAGAAGTTAAAGAAGCATTAGACACCACCATCTTCCTAGTAATCTAA
Protein sequenceShow/hide protein sequence
MPRLCSKKMLCWNFRGKDNAKLIRALNDLIQLHNPSIMLVFGSKISSTDADQQDVQIEVSSYIPQKVSVSVHFHSKHNESALCLLNEDTNTSPRPWGPNFFFASTRLMDN
TIVVLMGEVKEALDTTIFLVI