; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G14935 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G14935
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProtein FAR1-RELATED SEQUENCE
Genome locationClcChr02:27500907..27505918
RNA-Seq ExpressionClc02G14935
SyntenyClc02G14935
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR031052 - FHY3/FAR1 family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011462919.1 PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Fragaria vesca subsp. vesca]3.7e-1472.73Show/hide
Query:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRP
        ML+KY+L++NKWL  LFELREKWAMVY RH F ADMKSTQR+E+MN V K YL P
Subjt:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRP

XP_024196153.1 protein FAR1-RELATED SEQUENCE 5-like [Rosa chinensis]9.2e-1356.06Show/hide
Query:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRPGASCDCPFEVY
        ML+K+ L+++KWL  LF++REKWA+VY RH F ADM STQR+E+MN + K+YL+P     C FE Y
Subjt:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRPGASCDCPFEVY

XP_030964544.1 protein FAR1-RELATED SEQUENCE 5-like [Quercus lobata]1.2e-1255.22Show/hide
Query:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRPGASCDCPFEVYA
        ML +Y L DNKWL  +F+++EKWAMVY RH F  DMK TQR+E++N V K+YL+P   C C  E Y+
Subjt:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRPGASCDCPFEVYA

XP_031741897.1 protein FAR1-RELATED SEQUENCE 5 isoform X1 [Cucumis sativus]4.0e-1681.82Show/hide
Query:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRP
        MLDKYAL +NKWLTYLFELREKWA+VY R AF ADMKSTQR+E MNEV K+YLRP
Subjt:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRP

XP_040364377.1 protein FAR1-RELATED SEQUENCE 5-like [Rosa chinensis]4.1e-1369.09Show/hide
Query:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRP
        +L+KY L +NKWL  LFELREKWA+VY RH F ADMKSTQR+E MN V K+YL+P
Subjt:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRP

TrEMBL top hitse value%identityAlignment
A0A0A0KLA3 Protein FAR1-RELATED SEQUENCE1.9e-1681.82Show/hide
Query:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRP
        MLDKYAL +NKWLTYLFELREKWA+VY R AF ADMKSTQR+E MNEV K+YLRP
Subjt:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRP

A0A2N9F123 SWIM-type domain-containing protein3.4e-1367.27Show/hide
Query:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRP
        ML KY+L DNKWL  +FE++EKWAMVY RH F ADMKSTQR+E++N V K+YL+P
Subjt:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRP

A0A2N9F688 Protein FAR1-RELATED SEQUENCE3.4e-1367.27Show/hide
Query:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRP
        ML KY+L DNKWL  +FE++EKWAMVY RH F ADMKSTQR+E++N V K+YL+P
Subjt:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRP

A0A2N9FFR6 Protein FAR1-RELATED SEQUENCE3.4e-1367.27Show/hide
Query:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRP
        ML KY+L DNKWL  +FE++EKWAMVY RH F ADMKSTQR+E++N V K+YL+P
Subjt:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRP

A0A2N9GV28 Protein FAR1-RELATED SEQUENCE3.4e-1367.27Show/hide
Query:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRP
        ML KY+L DNKWL  +FE++EKWAMVY RH F ADMKSTQR+E++N V K+YL+P
Subjt:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRP

SwissProt top hitse value%identityAlignment
Q5UBY2 Protein FAR1-RELATED SEQUENCE 12.8e-0435.19Show/hide
Query:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLR
        ++D++ +RDN WL  L+E RE W  VY +   +A M + QR++++N    +Y++
Subjt:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLR

Q6NQJ7 Protein FAR1-RELATED SEQUENCE 44.7e-0434.48Show/hide
Query:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRPGAS
        ++DK+ LRD  W+  L+E R+ WA  + R    A +    R+E++N +F +Y+ P  S
Subjt:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRPGAS

Q9SZL8 Protein FAR1-RELATED SEQUENCE 59.2e-0837.88Show/hide
Query:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRPGASCDCPFEVY
        +LDKY LRD++WL  ++  R +W  VY R  F ADM  T R++++N  F  Y+    +    F++Y
Subjt:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRPGASCDCPFEVY

Arabidopsis top hitse value%identityAlignment
AT1G76320.1 FAR1-related sequence 43.4e-0534.48Show/hide
Query:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRPGAS
        ++DK+ LRD  W+  L+E R+ WA  + R    A +    R+E++N +F +Y+ P  S
Subjt:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRPGAS

AT1G76320.2 FAR1-related sequence 43.4e-0534.48Show/hide
Query:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRPGAS
        ++DK+ LRD  W+  L+E R+ WA  + R    A +    R+E++N +F +Y+ P  S
Subjt:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRPGAS

AT4G19990.1 FAR1-related sequence 12.0e-0535.19Show/hide
Query:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLR
        ++D++ +RDN WL  L+E RE W  VY +   +A M + QR++++N    +Y++
Subjt:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLR

AT4G19990.2 FAR1-related sequence 12.0e-0535.19Show/hide
Query:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLR
        ++D++ +RDN WL  L+E RE W  VY +   +A M + QR++++N    +Y++
Subjt:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLR

AT4G38180.1 FAR1-related sequence 56.6e-0937.88Show/hide
Query:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRPGASCDCPFEVY
        +LDKY LRD++WL  ++  R +W  VY R  F ADM  T R++++N  F  Y+    +    F++Y
Subjt:  MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRPGASCDCPFEVY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGATAAATATGCTCTTAGAGATAACAAGTGGTTGACATATTTGTTTGAATTGCGAGAAAAATGGGCAATGGTATATAAGCGACATGCTTTTATGGCCGATATGAA
AAGTACACAACGTAATGAAAATATGAATGAGGTATTTAAACAATATCTAAGGCCTGGTGCATCATGCGACTGCCCTTTTGAAGTTTATGCTGTGGACTTTCTTGGTGTTG
CTGAATTTTTATCCCAATTGCTCCTTCGGCTTGCCCGTTGTTTCTGTTTTAAGGCCTCATCTTCTTCAATTGGGGAGGCTATGGACTTTGCTTCTGCCAAGCAAGATAGG
AATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGATAAATATGCTCTTAGAGATAACAAGTGGTTGACATATTTGTTTGAATTGCGAGAAAAATGGGCAATGGTATATAAGCGACATGCTTTTATGGCCGATATGAA
AAGTACACAACGTAATGAAAATATGAATGAGGTATTTAAACAATATCTAAGGCCTGGTGCATCATGCGACTGCCCTTTTGAAGTTTATGCTGTGGACTTTCTTGGTGTTG
CTGAATTTTTATCCCAATTGCTCCTTCGGCTTGCCCGTTGTTTCTGTTTTAAGGCCTCATCTTCTTCAATTGGGGAGGCTATGGACTTTGCTTCTGCCAAGCAAGATAGG
AATTGA
Protein sequenceShow/hide protein sequence
MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRPGASCDCPFEVYAVDFLGVAEFLSQLLLRLARCFCFKASSSSIGEAMDFASAKQDR
N