; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G15280 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G15280
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionTranslation initiation factor IF-3
Genome locationClcChr02:27911804..27916738
RNA-Seq ExpressionClc02G15280
SyntenyClc02G15280
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0032790 - ribosome disassembly (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0043022 - ribosome binding (molecular function)
InterPro domainsIPR001288 - Translation initiation factor 3
IPR019813 - Translation initiation factor 3, conserved site
IPR019814 - Translation initiation factor 3, N-terminal
IPR019815 - Translation initiation factor 3, C-terminal
IPR036787 - Translation initiation factor 3 (IF-3), N-terminal domain superfamily
IPR036788 - Translation initiation factor 3 (IF-3), C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144726.1 translation initiation factor IF3-4, chloroplastic [Cucumis sativus]5.6e-13488.29Show/hide
Query:  MAGLTGRFPFKPLLSQSSASATATTSAAAT---TSSASATPFRTSIPPLPLSSSKSNAFKFHLHKSNSLRLVFSFPVSSPIRTSVFARYGGAPRSSGPAD
        MAGL+G FPFK LLSQSSA+AT T+S++A    TSS+S TPFRTS P LP+SSS SNAFKF LHKSNSLRL+FS PVSSPIRTSVFAR GGAPRSSGP D
Subjt:  MAGLTGRFPFKPLLSQSSASATATTSAAAT---TSSASATPFRTSIPPLPLSSSKSNAFKFHLHKSNSLRLVFSFPVSSPIRTSVFARYGGAPRSSGPAD

Query:  SKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
        SKRS+DE GLD+SAI+S NVRLIDA+QNMVG+VSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
Subjt:  SKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI

Query:  DQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
        DQHDYSVRL+AA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVN VSA V
Subjt:  DQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV

XP_008452687.1 PREDICTED: translation initiation factor IF-3 [Cucumis melo]9.9e-13991.92Show/hide
Query:  MAGLTGRFPFKPLLSQSSASATATTSAAATTSSASATPFRTSIPPLPLSSS-KSNAFKFHLHKSNSLRLVFSFPVSSPIRTSVFARYGGAPRSSGPADSK
        MAGL+G FPFK LLSQSSA++T T+ AAA TSS+S TPFRTS P LP+SSS  SNAFK  LHKSNSLRLVFSFPVSSPIRTSVFAR GGAPRSSGP DSK
Subjt:  MAGLTGRFPFKPLLSQSSASATATTSAAATTSSASATPFRTSIPPLPLSSS-KSNAFKFHLHKSNSLRLVFSFPVSSPIRTSVFARYGGAPRSSGPADSK

Query:  RSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
        RS+DEFGLDVSAIRSNNVRLIDAQQNMVG+VSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
Subjt:  RSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ

Query:  HDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
        HDYSVRL+AA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
Subjt:  HDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV

XP_022158178.1 translation initiation factor IF3-4, chloroplastic [Momordica charantia]2.1e-13388.51Show/hide
Query:  MAGLTGRFPFKPLLSQSSASATATTSAAATTSSASATPFRTSIPPLPLSSSKSNAFKFHLHKSNSLRLVFSFPVSSPIRTSVFARYGGAPRSSGPADSKR
        MAGLT RFPFKPLLSQSSA+ T++ +A++++S+A+A PFRTSI PLPLSSS+SNAF F LH SNSLRL+    VSSPIR SVFAR+GGAPRSSGPADSKR
Subjt:  MAGLTGRFPFKPLLSQSSASATATTSAAATTSSASATPFRTSIPPLPLSSSKSNAFKFHLHKSNSLRLVFSFPVSSPIRTSVFARYGGAPRSSGPADSKR

Query:  SDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQH
        SDD+FGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQH
Subjt:  SDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQH

Query:  DYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
        DYSVRL+AA++FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+E+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+NEVSAGV
Subjt:  DYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV

XP_022946541.1 translation initiation factor IF3-4, chloroplastic-like [Cucurbita moschata]2.4e-12484.85Show/hide
Query:  MAGLTGRFPFKPLLSQSSASATATTSAAATTSSASATPFRTSIPPLPLSSSKSNAFKFHLHKSNSLRLVFSFPVSSPIRTSVFARYGGAPRSSGPADSKR
        MAGL+GRFPFK + SQSSA+ATATT+   T+SS+SATPFRTSI PLPL SSKSNAF+F LH SNSLRL     VSSPIRTSVFARYGGAPRSSGPA SKR
Subjt:  MAGLTGRFPFKPLLSQSSASATATTSAAATTSSASATPFRTSIPPLPLSSSKSNAFKFHLHKSNSLRLVFSFPVSSPIRTSVFARYGGAPRSSGPADSKR

Query:  SDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQH
        S+D   LDVS+IRSNNVRLID QQNMVGIV K+QAIQMAEDAELDLVVLSPDADPPVVRIMDY+KYRY+LQKKKR QQKKSAATRMDLKELKMGY IDQH
Subjt:  SDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQH

Query:  DYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AVNEVSAGV
        DYSVRLRAA+KFL+DGDKVKVIVNLKGRENEFR IAIEL++RFQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKDKP AVNEVSA V
Subjt:  DYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AVNEVSAGV

XP_038891171.1 translation initiation factor IF3-4, chloroplastic [Benincasa hispida]1.3e-14194.28Show/hide
Query:  MAGLTGRFPFKPLLSQSSASATATTSAAATTSSASATPFRTSIPPLPLSSSKSNAFKFHLHKSNSLRLVFSFPVSSPIRTSVFARYGGAPRSSGPADSKR
        MAGL+GRFPFKPLLSQS+ +   TTSAAA TSS+SATPFRTSI PLPLSSSK+NAFKF L KSNSLRLV SFPVSSPIRTSVF+RYGGAPRSSGPADSKR
Subjt:  MAGLTGRFPFKPLLSQSSASATATTSAAATTSSASATPFRTSIPPLPLSSSKSNAFKFHLHKSNSLRLVFSFPVSSPIRTSVFARYGGAPRSSGPADSKR

Query:  SDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQH
        SDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQH
Subjt:  SDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQH

Query:  DYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNEVSAGV
        DYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEE+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQE PPKKKDKPAVNEVSAGV
Subjt:  DYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNEVSAGV

TrEMBL top hitse value%identityAlignment
A0A0A0LH34 Translation initiation factor IF-32.7e-13488.29Show/hide
Query:  MAGLTGRFPFKPLLSQSSASATATTSAAAT---TSSASATPFRTSIPPLPLSSSKSNAFKFHLHKSNSLRLVFSFPVSSPIRTSVFARYGGAPRSSGPAD
        MAGL+G FPFK LLSQSSA+AT T+S++A    TSS+S TPFRTS P LP+SSS SNAFKF LHKSNSLRL+FS PVSSPIRTSVFAR GGAPRSSGP D
Subjt:  MAGLTGRFPFKPLLSQSSASATATTSAAAT---TSSASATPFRTSIPPLPLSSSKSNAFKFHLHKSNSLRLVFSFPVSSPIRTSVFARYGGAPRSSGPAD

Query:  SKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
        SKRS+DE GLD+SAI+S NVRLIDA+QNMVG+VSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
Subjt:  SKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI

Query:  DQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
        DQHDYSVRL+AA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVN VSA V
Subjt:  DQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV

A0A1S3BV82 Translation initiation factor IF-34.8e-13991.92Show/hide
Query:  MAGLTGRFPFKPLLSQSSASATATTSAAATTSSASATPFRTSIPPLPLSSS-KSNAFKFHLHKSNSLRLVFSFPVSSPIRTSVFARYGGAPRSSGPADSK
        MAGL+G FPFK LLSQSSA++T T+ AAA TSS+S TPFRTS P LP+SSS  SNAFK  LHKSNSLRLVFSFPVSSPIRTSVFAR GGAPRSSGP DSK
Subjt:  MAGLTGRFPFKPLLSQSSASATATTSAAATTSSASATPFRTSIPPLPLSSS-KSNAFKFHLHKSNSLRLVFSFPVSSPIRTSVFARYGGAPRSSGPADSK

Query:  RSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
        RS+DEFGLDVSAIRSNNVRLIDAQQNMVG+VSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
Subjt:  RSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ

Query:  HDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
        HDYSVRL+AA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
Subjt:  HDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV

A0A6J1DYM5 Translation initiation factor IF-31.0e-13388.51Show/hide
Query:  MAGLTGRFPFKPLLSQSSASATATTSAAATTSSASATPFRTSIPPLPLSSSKSNAFKFHLHKSNSLRLVFSFPVSSPIRTSVFARYGGAPRSSGPADSKR
        MAGLT RFPFKPLLSQSSA+ T++ +A++++S+A+A PFRTSI PLPLSSS+SNAF F LH SNSLRL+    VSSPIR SVFAR+GGAPRSSGPADSKR
Subjt:  MAGLTGRFPFKPLLSQSSASATATTSAAATTSSASATPFRTSIPPLPLSSSKSNAFKFHLHKSNSLRLVFSFPVSSPIRTSVFARYGGAPRSSGPADSKR

Query:  SDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQH
        SDD+FGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQH
Subjt:  SDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQH

Query:  DYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
        DYSVRL+AA++FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+E+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+NEVSAGV
Subjt:  DYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV

A0A6J1G3Y5 Translation initiation factor IF-31.1e-12484.85Show/hide
Query:  MAGLTGRFPFKPLLSQSSASATATTSAAATTSSASATPFRTSIPPLPLSSSKSNAFKFHLHKSNSLRLVFSFPVSSPIRTSVFARYGGAPRSSGPADSKR
        MAGL+GRFPFK + SQSSA+ATATT+   T+SS+SATPFRTSI PLPL SSKSNAF+F LH SNSLRL     VSSPIRTSVFARYGGAPRSSGPA SKR
Subjt:  MAGLTGRFPFKPLLSQSSASATATTSAAATTSSASATPFRTSIPPLPLSSSKSNAFKFHLHKSNSLRLVFSFPVSSPIRTSVFARYGGAPRSSGPADSKR

Query:  SDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQH
        S+D   LDVS+IRSNNVRLID QQNMVGIV K+QAIQMAEDAELDLVVLSPDADPPVVRIMDY+KYRY+LQKKKR QQKKSAATRMDLKELKMGY IDQH
Subjt:  SDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQH

Query:  DYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AVNEVSAGV
        DYSVRLRAA+KFL+DGDKVKVIVNLKGRENEFR IAIEL++RFQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKDKP AVNEVSA V
Subjt:  DYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AVNEVSAGV

A0A6J1KDY9 Translation initiation factor IF-31.3e-12384.18Show/hide
Query:  MAGLTGRFPFKPLLSQSSASATATTSAAATTSSASATPFRTSIPPLPLSSSKSNAFKFHLHKSNSLRLVFSFPVSSPIRTSVFARYGGAPRSSGPADSKR
        MAGL+GRFPFK + SQSSA+ATATTS     SS+SATPFRTSI PLP  SSKSNA +F LH SNSLRL     VSSPIRTSVFARYGGAPRSSGP  SKR
Subjt:  MAGLTGRFPFKPLLSQSSASATATTSAAATTSSASATPFRTSIPPLPLSSSKSNAFKFHLHKSNSLRLVFSFPVSSPIRTSVFARYGGAPRSSGPADSKR

Query:  SDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQH
        S+D   LDVS+IRSNNVRLID QQNMVGIV K+QAIQMAEDAELDLVVLSPDADPPVVRIMDY+KYRY+LQKKKR QQKKSAATRMDLKELKMGY IDQH
Subjt:  SDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQH

Query:  DYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AVNEVSAGV
        DYSVRLRAA+KFL+DGDKVKVIVNLKGRENEFR IAIEL++RFQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKDKP AVNEVSAGV
Subjt:  DYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AVNEVSAGV

SwissProt top hitse value%identityAlignment
B0JKQ1 Translation initiation factor IF-31.9e-3142.05Show/hide
Query:  DSKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN
        D +R+  +       IR   +R+ID+  + +GI++ A+A+++AE+ ELDLV++S  A PPV RIMDY KY++E +KK R  +KK      D+KE+KM Y 
Subjt:  DSKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN

Query:  IDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELA-TEEAKNFRDRNIFIVLVPNK
        ID+HDY+VR+  AQ+FLK GDKVK  +  +GRE +  N+A EL+ R  +++ ++A  ++A     RN+ ++L P K
Subjt:  IDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELA-TEEAKNFRDRNIFIVLVPNK

O82234 Translation initiation factor IF3-2, chloroplastic1.9e-7670.32Show/hide
Query:  TSVFARYGGAPRSSGP---ADSKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRG
        T  F   GG  R SG       K ++ +  LD+S+IRS  VRLID QQNM+G+VSK +A++MA+DAELDLV+LSPDADPPVV++MDY+KYRYE QK+K+ 
Subjt:  TSVFARYGGAPRSSGP---ADSKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRG

Query:  QQKKSAATRMDLKELKMGYNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQK
        QQKK+  TRMDLKELKMGYNIDQHDYSVRLRAAQKFL+DGDKVKVIV++KGRENEFRNIAIEL+RRFQ E+GELATEE+KNFRDRN+FI+LVPNK +++K
Subjt:  QQKKSAATRMDLKELKMGYNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQK

Query:  AQEPP-KKKDKPAVNEVSA
         QEPP +KK K A NE SA
Subjt:  AQEPP-KKKDKPAVNEVSA

Q0IDZ5 Translation initiation factor IF-32.1e-3044.32Show/hide
Query:  VRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLRAAQKFLKDG
        +R++DA    +G++ + QA+++A + ELDLV++S  ADPPV RIMDY K+++E +KK +  +KKS  T  ++KE+KM Y IDQHDY VR+  AQ+FLK G
Subjt:  VRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLRAAQKFLKDG

Query:  DKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRD-RNIFIVLVPNKAVLQKAQEPPKKKDKPAVNE
        DKVK  V  +GRE +   +A  L+RR  +++ E A  +    R+ RN+ + L P KA L K     K KD+  VN+
Subjt:  DKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRD-RNIFIVLVPNKAVLQKAQEPPKKKDKPAVNE

Q8R9C2 Translation initiation factor IF-31.2e-3043.48Show/hide
Query:  IRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLRAAQK
        IR   VRLID     +GI+S  +A ++A++  LDLV + P+A+PPV ++MD+ KYRYEL K+++  +KK     +++KE++M  NI+ HD+ V+L++A K
Subjt:  IRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLRAAQK

Query:  FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELA-TEEAKNFRDRNIFIVLVPNK
        FLKDGDKVKV +  +GRE    ++A +L++RF EE+ E    E+A +   RN+ +V+ P K
Subjt:  FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELA-TEEAKNFRDRNIFIVLVPNK

Q94B52 Translation initiation factor IF3-4, chloroplastic7.0e-7971.95Show/hide
Query:  SVFARY--GGAPRSSGPAD----SKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKK
        ++  RY  GG   S  P D     K S+D+  LD+SAIRS  VRLID QQNM+G+VSK +A++ AEDAELDLV+LSPDADPPVVR+MDY+KYRYE QK+K
Subjt:  SVFARY--GGAPRSSGPAD----SKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKK

Query:  RGQQKKSAATRMDLKELKMGYNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVL
        + QQKK+  TRMDLKELKMGYNIDQHDYSVR+RAA+KFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ E+GEL TEE+KNFRDRN+FIVLVPNK V+
Subjt:  RGQQKKSAATRMDLKELKMGYNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVL

Query:  QKAQE-PPKKKDKPAVNEVSA
        +K QE PPKKK KPA ++VSA
Subjt:  QKAQE-PPKKKDKPAVNEVSA

Arabidopsis top hitse value%identityAlignment
AT1G34360.1 translation initiation factor 3 (IF-3) family protein5.1e-0830.68Show/hide
Query:  IRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQK--KKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLRAA
        I  + VRL+  + + V  VS  +A++ A++ + DLV +  DA PPV +I+ Y+   Y+  K  K+R + K++ A R D+KE++    I+  D   +   A
Subjt:  IRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQK--KKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLRAA

Query:  QKFLKDGDKVKVI-VNLKGRENEFR-NIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKK
         K ++ G +VK + V  K +  E      +EL+ RF   +G+ A  E+    DR   +V+V +         PPKK
Subjt:  QKFLKDGDKVKVI-VNLKGRENEFR-NIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKK

AT2G24060.1 Translation initiation factor 3 protein1.4e-7770.32Show/hide
Query:  TSVFARYGGAPRSSGP---ADSKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRG
        T  F   GG  R SG       K ++ +  LD+S+IRS  VRLID QQNM+G+VSK +A++MA+DAELDLV+LSPDADPPVV++MDY+KYRYE QK+K+ 
Subjt:  TSVFARYGGAPRSSGP---ADSKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRG

Query:  QQKKSAATRMDLKELKMGYNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQK
        QQKK+  TRMDLKELKMGYNIDQHDYSVRLRAAQKFL+DGDKVKVIV++KGRENEFRNIAIEL+RRFQ E+GELATEE+KNFRDRN+FI+LVPNK +++K
Subjt:  QQKKSAATRMDLKELKMGYNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQK

Query:  AQEPP-KKKDKPAVNEVSA
         QEPP +KK K A NE SA
Subjt:  AQEPP-KKKDKPAVNEVSA

AT4G30690.1 Translation initiation factor 3 protein5.0e-8071.95Show/hide
Query:  SVFARY--GGAPRSSGPAD----SKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKK
        ++  RY  GG   S  P D     K S+D+  LD+SAIRS  VRLID QQNM+G+VSK +A++ AEDAELDLV+LSPDADPPVVR+MDY+KYRYE QK+K
Subjt:  SVFARY--GGAPRSSGPAD----SKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKK

Query:  RGQQKKSAATRMDLKELKMGYNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVL
        + QQKK+  TRMDLKELKMGYNIDQHDYSVR+RAA+KFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ E+GEL TEE+KNFRDRN+FIVLVPNK V+
Subjt:  RGQQKKSAATRMDLKELKMGYNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVL

Query:  QKAQE-PPKKKDKPAVNEVSA
        +K QE PPKKK KPA ++VSA
Subjt:  QKAQE-PPKKKDKPAVNEVSA

AT4G30690.2 Translation initiation factor 3 protein5.0e-6461.54Show/hide
Query:  SVFARY--GGAPRSSGPAD----SKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKK
        ++  RY  GG   S  P D     K S+D+  LD+SAIRS  VRLID QQNM+G+VSK +A++ AEDAELDLV+LSPDADPPVVR+MDY+          
Subjt:  SVFARY--GGAPRSSGPAD----SKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKK

Query:  RGQQKKSAATRMDLKELKMGYNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVL
                            YNIDQHDYSVR+RAA+KFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ E+GEL TEE+KNFRDRN+FIVLVPNK V+
Subjt:  RGQQKKSAATRMDLKELKMGYNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVL

Query:  QKAQE-PPKKKDKPAVNEVSA
        +K QE PPKKK KPA ++VSA
Subjt:  QKAQE-PPKKKDKPAVNEVSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGGCTCACCGGCAGATTCCCTTTCAAACCTCTCTTATCCCAATCATCCGCCTCCGCCACCGCCACCACCTCCGCCGCCGCCACAACTTCCTCCGCCTCCGCTAC
TCCCTTCCGAACCTCAATTCCCCCTCTACCCCTCTCCTCCTCTAAATCCAATGCCTTCAAATTCCACCTTCACAAATCCAACTCTCTGCGTCTCGTCTTCTCCTTTCCCG
TTTCCTCTCCAATTCGTACTTCTGTATTTGCTCGATACGGCGGCGCTCCTCGATCTTCAGGACCGGCTGATTCTAAGCGCTCTGACGATGAATTTGGTCTCGATGTTTCC
GCCATCAGGTCGAATAATGTGAGGCTTATCGATGCACAACAGAACATGGTTGGAATCGTGTCGAAGGCCCAGGCCATTCAAATGGCTGAAGACGCTGAACTTGATTTGGT
TGTATTATCCCCTGATGCAGATCCTCCAGTTGTCAGAATAATGGATTACAATAAATATAGGTATGAACTGCAAAAGAAGAAAAGGGGACAACAGAAGAAAAGTGCTGCAA
CTCGCATGGATTTGAAAGAGCTTAAAATGGGTTATAACATCGACCAACATGATTACTCTGTCCGTTTGAGAGCTGCACAAAAGTTTTTGAAAGATGGAGACAAGGTTAAA
GTTATAGTGAACCTGAAAGGTCGTGAAAATGAGTTCAGAAACATAGCAATTGAGCTCATCAGACGTTTCCAGGAAGAAGTTGGAGAGCTTGCAACTGAAGAGGCCAAAAA
CTTCAGAGACAGGAATATATTTATTGTTCTAGTTCCTAACAAGGCTGTTCTACAAAAGGCTCAAGAACCCCCTAAGAAAAAGGATAAACCTGCAGTTAATGAAGTTTCTG
CTGGTGTTTAA
mRNA sequenceShow/hide mRNA sequence
CTTAGTTTTAAAAAATCAAAAGGTTCACCGATTAATTTGTAATTTTAAAGTTCATGGATTAAAGTGACAACAATCTCAAAGTTTAGGACTAAAGATGTAATGGCTAATAT
GAACATAGTTCGAACTCACATAAATAAACGTATCATTGACCTTAAGGTTTGAGGTTTCATCTTCTTACATAATTGTTAAAAAAAAAAATTTTAATGTCTAATTTAAGTTA
AGTTGTCCACTAAAAAAGCACTAAAAAAAAGATCTTCCAATGAAAAAAGAAGAATACAGTTGAGTCCGATCCAAGTTCAAACTATCGTGGATAAGATTTTTTTTCTCTTT
TTTAATTTTCTTTTCCATTTTCTTAAAAAAAAAAAATCGCCAAACTCCCACCCTCCACTGCCCCCTTCCACAGCTCAAAGCTATGGCTGGGCTCACCGGCAGATTCCCTT
TCAAACCTCTCTTATCCCAATCATCCGCCTCCGCCACCGCCACCACCTCCGCCGCCGCCACAACTTCCTCCGCCTCCGCTACTCCCTTCCGAACCTCAATTCCCCCTCTA
CCCCTCTCCTCCTCTAAATCCAATGCCTTCAAATTCCACCTTCACAAATCCAACTCTCTGCGTCTCGTCTTCTCCTTTCCCGTTTCCTCTCCAATTCGTACTTCTGTATT
TGCTCGATACGGCGGCGCTCCTCGATCTTCAGGACCGGCTGATTCTAAGCGCTCTGACGATGAATTTGGTCTCGATGTTTCCGCCATCAGGTCGAATAATGTGAGGCTTA
TCGATGCACAACAGAACATGGTTGGAATCGTGTCGAAGGCCCAGGCCATTCAAATGGCTGAAGACGCTGAACTTGATTTGGTTGTATTATCCCCTGATGCAGATCCTCCA
GTTGTCAGAATAATGGATTACAATAAATATAGGTATGAACTGCAAAAGAAGAAAAGGGGACAACAGAAGAAAAGTGCTGCAACTCGCATGGATTTGAAAGAGCTTAAAAT
GGGTTATAACATCGACCAACATGATTACTCTGTCCGTTTGAGAGCTGCACAAAAGTTTTTGAAAGATGGAGACAAGGTTAAAGTTATAGTGAACCTGAAAGGTCGTGAAA
ATGAGTTCAGAAACATAGCAATTGAGCTCATCAGACGTTTCCAGGAAGAAGTTGGAGAGCTTGCAACTGAAGAGGCCAAAAACTTCAGAGACAGGAATATATTTATTGTT
CTAGTTCCTAACAAGGCTGTTCTACAAAAGGCTCAAGAACCCCCTAAGAAAAAGGATAAACCTGCAGTTAATGAAGTTTCTGCTGGTGTTTAAGCTCAGGAACCGTCGAG
CTTTAACCGAAAATAGAAGGGTTAGTTGCAACAATCTAAATCTTCTTCTACCATAGAGAAATTTGAGAGATTAATGTATAATGTTTTGTTTAATCTTATGCACCAGACTT
TTGTTCATCCTATTTTTTTAGTGGAATGTTTAGAAATCAGATGTGTTACTAATTCTTTTGAAAACATCAATTCATTTAAGCATCTTGGCACTTGGCAT
Protein sequenceShow/hide protein sequence
MAGLTGRFPFKPLLSQSSASATATTSAAATTSSASATPFRTSIPPLPLSSSKSNAFKFHLHKSNSLRLVFSFPVSSPIRTSVFARYGGAPRSSGPADSKRSDDEFGLDVS
AIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLRAAQKFLKDGDKVK
VIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV