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Clc02G15310 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G15310
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUPF0057 membrane protein
Genome locationClcChr02:27936475..27937395
RNA-Seq ExpressionClc02G15310
SyntenyClc02G15310
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000612 - Proteolipid membrane potential modulator


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008452728.1 PREDICTED: UPF0057 membrane protein At4g30660 [Cucumis melo]2.8e-3293.33Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLYSPA
        M NGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGY+PGIIYA+YAI FVDRDQFFDEYRRPLYS A
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLYSPA

XP_022158160.1 UPF0057 membrane protein At2g24040-like [Momordica charantia]7.4e-3395.95Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLYSP
        MANGCEICCEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGY+PGIIYALYAIVFVDRDQFFDEYRRPLY+P
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLYSP

XP_022938010.1 UPF0057 membrane protein At4g30660-like [Cucurbita moschata]1.3e-3293.51Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLYSPAPT
        MANGCEI CEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGYIPGIIYALY+IVFVDRD FFDEYRRPLYSP PT
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLYSPAPT

XP_022946545.1 UPF0057 membrane protein At2g24040-like [Cucurbita moschata]1.7e-3296Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLYSPA
        MANGCEICCEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGYIPGIIYALYAIV+VDRDQFFDEYRRPLYS A
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLYSPA

XP_038890692.1 UPF0057 membrane protein At4g30660-like [Benincasa hispida]7.9e-3597.4Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLYSPAPT
        MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLY+PA T
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLYSPAPT

TrEMBL top hitse value%identityAlignment
A0A5A7UJR3 UPF0057 membrane protein1.4e-3293.33Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLYSPA
        M NGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGY+PGIIYA+YAI FVDRDQFFDEYRRPLYS A
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLYSPA

A0A6J1DV17 UPF0057 membrane protein At2g24040-like3.6e-3395.95Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLYSP
        MANGCEICCEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGY+PGIIYALYAIVFVDRDQFFDEYRRPLY+P
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLYSP

A0A6J1FBZ3 UPF0057 membrane protein At4g30660-like6.1e-3393.51Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLYSPAPT
        MANGCEI CEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGYIPGIIYALY+IVFVDRD FFDEYRRPLYSP PT
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLYSPAPT

A0A6J1G463 UPF0057 membrane protein At2g24040-like8.0e-3396Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLYSPA
        MANGCEICCEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGYIPGIIYALYAIV+VDRDQFFDEYRRPLYS A
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLYSPA

A0A6J1KI35 UPF0057 membrane protein At2g24040-like8.0e-3396Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLYSPA
        MANGCEICCEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGYIPGIIYALYAIV+VDRDQFFDEYRRPLYS A
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLYSPA

SwissProt top hitse value%identityAlignment
A2Y075 Hydrophobic protein LTI6B1.4e-1069.23Show/hide
Query:  GCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAI
        G   C +ILIAI++PPLGV LKFG C  EF +CL+LT LGYIPGIIYA+YAI
Subjt:  GCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAI

O82232 UPF0057 membrane protein At2g240401.1e-2673.61Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLY
        MA+ CE+CCEI IAIL+PP+GVCL+ GCCTVEF +CLILT LGY+PGIIYA+YAI F+ RD++FDEYRRP+Y
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLY

Q9LRI7 Hydrophobic protein OSR84.5e-1761.76Show/hide
Query:  MANG-CEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEY
        MA+G C    EIL+AI++PPLGV L+FGCC++EFC+CL+LT+LGY+PGIIYA+Y +V +D DQ+  EY
Subjt:  MANG-CEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEY

Q9M095 UPF0057 membrane protein At4g306502.8e-1975.41Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRD
        MA+  E+ CEILIAIL+PPLGVCLK GCCTVEF +CL+LT+LGYIPGIIYALY IVF +R+
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRD

Q9SUI0 UPF0057 membrane protein At4g306602.0e-2569.86Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLYS
        M + CEI CEI+IAIL+PPLGVC + GCCTVEF +CL+LT+LGY+PGIIYA+Y IVF  R+++FDEYRRP+YS
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLYS

Arabidopsis top hitse value%identityAlignment
AT2G24040.1 Low temperature and salt responsive protein family7.7e-2873.61Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLY
        MA+ CE+CCEI IAIL+PP+GVCL+ GCCTVEF +CLILT LGY+PGIIYA+YAI F+ RD++FDEYRRP+Y
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLY

AT4G28088.1 Low temperature and salt responsive protein family1.3e-3287.5Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLY
        MANGCEICCEI+IAILIPPLGVCL+ GCCT EF +CLILTLLGY+PGIIYALYAIV+VDRDQFFDEYRRPL+
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLY

AT4G30650.1 Low temperature and salt responsive protein family2.0e-2075.41Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRD
        MA+  E+ CEILIAIL+PPLGVCLK GCCTVEF +CL+LT+LGYIPGIIYALY IVF +R+
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRD

AT4G30660.1 Low temperature and salt responsive protein family1.4e-2669.86Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLYS
        M + CEI CEI+IAIL+PPLGVC + GCCTVEF +CL+LT+LGY+PGIIYA+Y IVF  R+++FDEYRRP+YS
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLYS

AT4G30660.2 Low temperature and salt responsive protein family1.4e-2669.86Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLYS
        M + CEI CEI+IAIL+PPLGVC + GCCTVEF +CL+LT+LGY+PGIIYA+Y IVF  R+++FDEYRRP+YS
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLYS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAATGGATGTGAGATCTGCTGCGAAATTCTCATCGCCATCCTCATTCCTCCTCTAGGAGTTTGCCTCAAATTCGGCTGTTGCACGGTGGAATTTTGTCTGTGTTT
GATTTTGACTCTTCTCGGTTACATTCCGGGGATCATTTATGCGCTCTATGCAATCGTCTTCGTCGATCGCGACCAGTTCTTTGATGAGTACAGGCGTCCGCTCTATTCGC
CGGCGCCGACGGCGGTGTAG
mRNA sequenceShow/hide mRNA sequence
AAACAATAAAAATGAAATAAATATATAATAATAAATGAAATAAAATAAGTGGTAGAAGACTTAAATTGGATGGTCAATCTATCTTAAAAGCAACAACAGAACCGCCATTA
ACTCTTCACAGATCAAAATCAACCACTTCCCCTTCCACACAACTCTCTCTCAATCTCTCACTCGAAAACCTCGAAAATGGCGAATGGATGTGAGATCTGCTGCGAAATTC
TCATCGCCATCCTCATTCCTCCTCTAGGAGTTTGCCTCAAATTCGGCTGTTGCACGGTGGAATTTTGTCTGTGTTTGATTTTGACTCTTCTCGGTTACATTCCGGGGATC
ATTTATGCGCTCTATGCAATCGTCTTCGTCGATCGCGACCAGTTCTTTGATGAGTACAGGCGTCCGCTCTATTCGCCGGCGCCGACGGCGGTGTAGAACATGTTTGAATT
TCTTGATCGCTGTTTTAACTTTTCGAATAAGGATTTTTAAGTTGTTTCCTTTGTAGTTTTTGGATATTGAATTGGTTTTGATTTACTTAGATTTGCGAGGGTTTCTCTTT
CTTGATTGAATTTGGATTTTGTTGGGAGGTTTGGATGTGTGGTTATGAACTTAGAAGAAGTTAGAACTATGAACTTTGAAATAATGTGGGTGACACTAGAAAGCTAGAAG
AATGGATGAAGGGCCTATTTATTAACACTATTTATTTTTTAAATAAAACGTTAAAATATCATTTTAATCCTT
Protein sequenceShow/hide protein sequence
MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLYSPAPTAV