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Clc02G15500 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G15500
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionSHSP domain-containing protein
Genome locationClcChr02:28116535..28117176
RNA-Seq ExpressionClc02G15500
SyntenyClc02G15500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056096.1 hypothetical protein E6C27_scaffold323G00580 [Cucumis melo var. makuwa]1.8e-3478.18Show/hide
Query:  MGVLEIAGIGGRRWD-YYEKLYSGGHR-----VVKRRSRRWMKKILKRGMKGFRLYRLTRLR-SFGLKVSFLILLSRRIREIVNRMKVVEDVCPNIIFST
        MG+LEIAGIGGRRW+ +YEKL S G       V+  R RRW+KK+LKRGMKGFRLYR TRLR SFGLKVSFL+ LSRRIREIVNRMK VEDVCPNIIFST
Subjt:  MGVLEIAGIGGRRWD-YYEKLYSGGHR-----VVKRRSRRWMKKILKRGMKGFRLYRLTRLR-SFGLKVSFLILLSRRIREIVNRMKVVEDVCPNIIFST

Query:  QWGLPVLSYI
        QWGLPVLSYI
Subjt:  QWGLPVLSYI

KAE9446725.1 hypothetical protein C3L33_21367, partial [Rhododendron williamsianum]8.2e-0840.95Show/hide
Query:  LEIAGIGGRRWDY-YEKLYSGGH-RVVKRRSRRWMKKILKRGMKGFRLYRLTRLRSFGLKVSFLILLSRRIR----EIVNRMKVVEDVCPNIIFSTQWGL
        +EI+ + G RW   YEKL    H +   R  RRW  K+  R    FR  RL R R    +   +++  +RI     EI+NRMK+++D+CP I+FS  WGL
Subjt:  LEIAGIGGRRWDY-YEKLYSGGH-RVVKRRSRRWMKKILKRGMKGFRLYRLTRLRSFGLKVSFLILLSRRIR----EIVNRMKVVEDVCPNIIFSTQWGL

Query:  PVLSY
        PVLS+
Subjt:  PVLSY

KAG6599155.1 Transmembrane protein 184A, partial [Cucurbita argyrosperma subsp. sororia]8.2e-3277.45Show/hide
Query:  MGVLEIAGIGGRRWDYYEKLYSGGHRVVKRRSRRWMKKILKRGMKGFRLYRLTRLRSFGLKVSFLILLSRRIREIVNRMKVVEDVCPNIIFSTQWGLPVL
        MG+LE AGIGGRRW+ YEKL+   + VVK R RRWMKK LKRG KGFRLYRLTR RSF LKVSFL+L+SRRIREIVNRMK VEDVC N+IF TQWGLP L
Subjt:  MGVLEIAGIGGRRWDYYEKLYSGGHRVVKRRSRRWMKKILKRGMKGFRLYRLTRLRSFGLKVSFLILLSRRIREIVNRMKVVEDVCPNIIFSTQWGLPVL

Query:  SY
        SY
Subjt:  SY

KGN61039.1 hypothetical protein Csa_021124 [Cucumis sativus]7.2e-3682.08Show/hide
Query:  MGVLEIAGIGGRRWD-YYEKLYSGG-HRVVKRRSRRWMKKILKRGMKGFRLYRLTRLR-SFGLKVSFLILLSRRIREIVNRMKVVEDVCPNIIFSTQWGL
        M +LEIAGIGGRRW+ +YEKL SGG +RVV  R RRW+KK+LKRGMKGFRLYR TRL+ SFGLKVSFL+ LSRRIREIV+RMKVVEDVCPNIIFSTQWGL
Subjt:  MGVLEIAGIGGRRWD-YYEKLYSGG-HRVVKRRSRRWMKKILKRGMKGFRLYRLTRLR-SFGLKVSFLILLSRRIREIVNRMKVVEDVCPNIIFSTQWGL

Query:  PVLSYI
        PVLSYI
Subjt:  PVLSYI

OAY43889.1 hypothetical protein MANES_08G105911v8 [Manihot esculenta]1.4e-0745.63Show/hide
Query:  MGVLEIAGIGGRRWDYYEKLYSGGHRVVKRRSRRWMKKILKRGMKGFRLYRLTRLRSFGLKVSFL-ILLSRRIREIVNRMKVVEDVCPNIIFSTQWGLPV
        MG+ +I G+  R    YEKL S   ++ K R R W+KK L  G+KG RL R  +L    L V  L   ++R   +I++R+K +ED+ PNIIFSTQ GLPV
Subjt:  MGVLEIAGIGGRRWDYYEKLYSGGHRVVKRRSRRWMKKILKRGMKGFRLYRLTRLRSFGLKVSFL-ILLSRRIREIVNRMKVVEDVCPNIIFSTQWGLPV

Query:  LSY
        LS+
Subjt:  LSY

TrEMBL top hitse value%identityAlignment
A0A0A0LJ29 Uncharacterized protein3.5e-3682.08Show/hide
Query:  MGVLEIAGIGGRRWD-YYEKLYSGG-HRVVKRRSRRWMKKILKRGMKGFRLYRLTRLR-SFGLKVSFLILLSRRIREIVNRMKVVEDVCPNIIFSTQWGL
        M +LEIAGIGGRRW+ +YEKL SGG +RVV  R RRW+KK+LKRGMKGFRLYR TRL+ SFGLKVSFL+ LSRRIREIV+RMKVVEDVCPNIIFSTQWGL
Subjt:  MGVLEIAGIGGRRWD-YYEKLYSGG-HRVVKRRSRRWMKKILKRGMKGFRLYRLTRLR-SFGLKVSFLILLSRRIREIVNRMKVVEDVCPNIIFSTQWGL

Query:  PVLSYI
        PVLSYI
Subjt:  PVLSYI

A0A2C9VF51 Uncharacterized protein6.8e-0845.63Show/hide
Query:  MGVLEIAGIGGRRWDYYEKLYSGGHRVVKRRSRRWMKKILKRGMKGFRLYRLTRLRSFGLKVSFL-ILLSRRIREIVNRMKVVEDVCPNIIFSTQWGLPV
        MG+ +I G+  R    YEKL S   ++ K R R W+KK L  G+KG RL R  +L    L V  L   ++R   +I++R+K +ED+ PNIIFSTQ GLPV
Subjt:  MGVLEIAGIGGRRWDYYEKLYSGGHRVVKRRSRRWMKKILKRGMKGFRLYRLTRLRSFGLKVSFL-ILLSRRIREIVNRMKVVEDVCPNIIFSTQWGLPV

Query:  LSY
        LS+
Subjt:  LSY

A0A540N615 Uncharacterized protein4.4e-0743.4Show/hide
Query:  MGVLEIAGIGGRRWDYYEKLYSGGHRVVKRRSRRWMKKILKRGMKGFRLYRLTRLRSFGLKVSFLILLSRRIREI----VNRMKVVEDVCPNIIFSTQWG
        MG  +I  +GGR    YEKL     +V +   ++W+KK+  R +KGF   RL+R R   LK+  +++ + R+  I    VNRMK V+   P IIFSTQWG
Subjt:  MGVLEIAGIGGRRWDYYEKLYSGGHRVVKRRSRRWMKKILKRGMKGFRLYRLTRLRSFGLKVSFLILLSRRIREI----VNRMKVVEDVCPNIIFSTQWG

Query:  LPVLSY
        LPVLS+
Subjt:  LPVLSY

A0A5D3BCS3 Uncharacterized protein8.5e-3578.18Show/hide
Query:  MGVLEIAGIGGRRWD-YYEKLYSGGHR-----VVKRRSRRWMKKILKRGMKGFRLYRLTRLR-SFGLKVSFLILLSRRIREIVNRMKVVEDVCPNIIFST
        MG+LEIAGIGGRRW+ +YEKL S G       V+  R RRW+KK+LKRGMKGFRLYR TRLR SFGLKVSFL+ LSRRIREIVNRMK VEDVCPNIIFST
Subjt:  MGVLEIAGIGGRRWD-YYEKLYSGGHR-----VVKRRSRRWMKKILKRGMKGFRLYRLTRLR-SFGLKVSFLILLSRRIREIVNRMKVVEDVCPNIIFST

Query:  QWGLPVLSYI
        QWGLPVLSYI
Subjt:  QWGLPVLSYI

A0A6A4KLK9 SHSP domain-containing protein (Fragment)4.0e-0840.95Show/hide
Query:  LEIAGIGGRRWDY-YEKLYSGGH-RVVKRRSRRWMKKILKRGMKGFRLYRLTRLRSFGLKVSFLILLSRRIR----EIVNRMKVVEDVCPNIIFSTQWGL
        +EI+ + G RW   YEKL    H +   R  RRW  K+  R    FR  RL R R    +   +++  +RI     EI+NRMK+++D+CP I+FS  WGL
Subjt:  LEIAGIGGRRWDY-YEKLYSGGH-RVVKRRSRRWMKKILKRGMKGFRLYRLTRLRSFGLKVSFLILLSRRIR----EIVNRMKVVEDVCPNIIFSTQWGL

Query:  PVLSY
        PVLS+
Subjt:  PVLSY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGTTCTGGAGATTGCTGGCATTGGAGGACGTCGATGGGATTACTATGAGAAGCTGTACAGTGGGGGACATAGGGTGGTTAAGCGTAGATCGCGTCGATGGATGAA
GAAAATATTAAAGAGAGGAATGAAGGGTTTTCGATTGTATCGACTTACAAGGTTGAGGAGTTTTGGTTTGAAGGTATCATTTTTAATCTTATTGTCAAGAAGAATTAGGG
AGATTGTCAATAGAATGAAGGTTGTTGAAGATGTATGTCCTAATATCATCTTCTCTACTCAATGGGGACTTCCTGTTTTATCTTATATATAA
mRNA sequenceShow/hide mRNA sequence
CATAGGGGAGCCTCACCCATAACTCTATAAATTTGTGCAATCTTCTCCATGTGTTTCAAACTTAGATATCCGCTACGGGTTCACAAACAGAGTACTAGTTTTCTCTTGTT
GCCAATTCCTTTGAGTTTAGTTCCACTGGTTTTAAGCATATACTTTCAACGTAAGAGGTCAAAGGTTCGAATCCCTGATCTATAACGTCAGGCAAATGGGTGTTCTGGAG
ATTGCTGGCATTGGAGGACGTCGATGGGATTACTATGAGAAGCTGTACAGTGGGGGACATAGGGTGGTTAAGCGTAGATCGCGTCGATGGATGAAGAAAATATTAAAGAG
AGGAATGAAGGGTTTTCGATTGTATCGACTTACAAGGTTGAGGAGTTTTGGTTTGAAGGTATCATTTTTAATCTTATTGTCAAGAAGAATTAGGGAGATTGTCAATAGAA
TGAAGGTTGTTGAAGATGTATGTCCTAATATCATCTTCTCTACTCAATGGGGACTTCCTGTTTTATCTTATATATAATTCCTCTTCCAAGTTGTTTGTTGCTTTGACTCA
TGTTTTTATTAGTGGCTGGATTATTCATGTAACTTTTGGTTATATATGTAATGTATAAAATGGAATATTATAGGACTGTGTTTACTTCTTTC
Protein sequenceShow/hide protein sequence
MGVLEIAGIGGRRWDYYEKLYSGGHRVVKRRSRRWMKKILKRGMKGFRLYRLTRLRSFGLKVSFLILLSRRIREIVNRMKVVEDVCPNIIFSTQWGLPVLSYI