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Clc02G15510 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G15510
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionLoricrin
Genome locationClcChr02:28126987..28129620
RNA-Seq ExpressionClc02G15510
SyntenyClc02G15510
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599154.1 hypothetical protein SDJN03_08932, partial [Cucurbita argyrosperma subsp. sororia]1.0e-5677.71Show/hide
Query:  MLESRHAENNISDVGCSGVNDDGDDEDDETRKTVAKTEIGHDDFDDDPKMEIGK-KGFGKAKQAMFYPFRKAKKQILRRRIKRASSSSSSSSSSSVTCTR
        MLES +AEN++SDVGCSGVNDDGDDEDDE RK++AK +I   D        +GK KGFGKAK+ M YPFRKAKKQILRRRIKR   SSS SSSSSV CTR
Subjt:  MLESRHAENNISDVGCSGVNDDGDDEDDETRKTVAKTEIGHDDFDDDPKMEIGK-KGFGKAKQAMFYPFRKAKKQILRRRIKRASSSSSSSSSSSVTCTR

Query:  RTNSSDKRGFDGSVNQGCGFCFAKLSISDSKNGSPTDPNHGKFTYEMLKVLIEKNDFYSKESNPHL
        RT+SSDKR FDGSVNQGCGFCF KLSISDSKNG PTDPNH KF+ EMLKVLIEKNDFYSKESNPHL
Subjt:  RTNSSDKRGFDGSVNQGCGFCFAKLSISDSKNGSPTDPNHGKFTYEMLKVLIEKNDFYSKESNPHL

XP_008452984.1 PREDICTED: uncharacterized protein LOC103493824 [Cucumis melo]1.2e-7086.39Show/hide
Query:  MLESRHAENNISDVGCSGVNDDGDDEDDETRKTVAKTEIGHDDFDDDPKMEIGKKGFGKAKQAMFYPFRKAKKQILRRRIKRASSSSS----SSSSSSVT
        MLESRHAENNISDVGCSGVNDDGDDEDDETR T+AKT+I  D+FDDD KME+GKKGFGKAKQ MFYPFRKAKKQILRRRIKR SS SS    SSSS SV 
Subjt:  MLESRHAENNISDVGCSGVNDDGDDEDDETRKTVAKTEIGHDDFDDDPKMEIGKKGFGKAKQAMFYPFRKAKKQILRRRIKRASSSSS----SSSSSSVT

Query:  CTRRTNSSDKRGFDGSVNQGCGFCFAKLSISDSKNGSPTDPNHGKFTYEMLKVLIEKNDFYSKESNPHL
        C+RRTNS DKRGFDGSVNQGCGFC  KLSISDSKNGSPTDPNH KFT EMLKVLIEKNDFYSKESNPHL
Subjt:  CTRRTNSSDKRGFDGSVNQGCGFCFAKLSISDSKNGSPTDPNHGKFTYEMLKVLIEKNDFYSKESNPHL

XP_011648888.1 uncharacterized protein LOC101216013 [Cucumis sativus]7.2e-7188.41Show/hide
Query:  MLESRHAENNISDVGCSGVNDDGDDEDDETRKTVAKTEIGHDDFDDDPKMEIGKKGFGKAKQAMFYPFRKAKKQILRRRIKRASSSSSSSSSSSVTCTRR
        MLESRHAENNISDVGCSGVNDDGDDEDDETR T+AKT+I  D+FDDD KME+GKKGFGKAKQ MFYPFRKAKKQILRRRIKR   SS SSSSSSVTC+RR
Subjt:  MLESRHAENNISDVGCSGVNDDGDDEDDETRKTVAKTEIGHDDFDDDPKMEIGKKGFGKAKQAMFYPFRKAKKQILRRRIKRASSSSSSSSSSSVTCTRR

Query:  TNSSDKRGFDGSVNQGCGFCFAKLSISDSKNGSPTDPNHGKFTYEMLKVLIEKNDFYSKESNPH
        TNS DKRGFDGSVNQGCGFC  KLSISDSKNGSPTDPNH KFT EMLKVLIEKNDFYSKESNPH
Subjt:  TNSSDKRGFDGSVNQGCGFCFAKLSISDSKNGSPTDPNHGKFTYEMLKVLIEKNDFYSKESNPH

XP_023545330.1 uncharacterized protein LOC111804772 [Cucurbita pepo subsp. pepo]4.5e-5777.58Show/hide
Query:  MLESRHAENNISDVGCSGVNDDGDDEDDETRKTVAKTEIGHDDFDDDPKMEIGKKGFGKAKQAMFYPFRKAKKQILRRRIKRASSSSSSSSSSSVTCTRR
        MLES +AEN++SDVGCSGVNDDGDDEDDE RK++AK +I   D  +       +KGFGKAK+ M YPFRKAKKQILRRRIKR  SSS SSSSSSV CTRR
Subjt:  MLESRHAENNISDVGCSGVNDDGDDEDDETRKTVAKTEIGHDDFDDDPKMEIGKKGFGKAKQAMFYPFRKAKKQILRRRIKRASSSSSSSSSSSVTCTRR

Query:  TNSSDKRGFDGSVNQGCGFCFAKLSISDSKNGSPTDPNHGKFTYEMLKVLIEKNDFYSKESNPHL
        T+SSDKR FDGSVNQGCGFCF KLSISD KNG PTDPNH KFT EMLKVLIEKNDFYSKESNPHL
Subjt:  TNSSDKRGFDGSVNQGCGFCFAKLSISDSKNGSPTDPNHGKFTYEMLKVLIEKNDFYSKESNPHL

XP_038890967.1 uncharacterized protein LOC120080390 [Benincasa hispida]3.8e-7288.48Show/hide
Query:  MLESRHAENNISDVGCSGVNDDGDDEDDETRKTVAKTEIGHDDFDDDPKMEIGKKGFGKAKQAMFYPFRKAKKQILRRRIKRASSSSSSSSSSSVTCTRR
        MLESRHAENNISDVGCSG NDDGDDEDDETRKT+A T+I HD+FDDD KME+GKKGFGKAKQ MFYPFRKAKKQILRRRIK   S+SSS SSSSVTCTR+
Subjt:  MLESRHAENNISDVGCSGVNDDGDDEDDETRKTVAKTEIGHDDFDDDPKMEIGKKGFGKAKQAMFYPFRKAKKQILRRRIKRASSSSSSSSSSSVTCTRR

Query:  TNSSDKRGFDGSVNQGCGFCFAKLSISDSKNGSPTDPNHGKFTYEMLKVLIEKNDFYSKESNPHL
        TNSSDKRGFDGSVNQGCGFCF KLSISDSKNGSPTDPN+ KFT EMLKVLIEKNDFYSKESNPHL
Subjt:  TNSSDKRGFDGSVNQGCGFCFAKLSISDSKNGSPTDPNHGKFTYEMLKVLIEKNDFYSKESNPHL

TrEMBL top hitse value%identityAlignment
A0A0A0LH19 Uncharacterized protein3.5e-7188.41Show/hide
Query:  MLESRHAENNISDVGCSGVNDDGDDEDDETRKTVAKTEIGHDDFDDDPKMEIGKKGFGKAKQAMFYPFRKAKKQILRRRIKRASSSSSSSSSSSVTCTRR
        MLESRHAENNISDVGCSGVNDDGDDEDDETR T+AKT+I  D+FDDD KME+GKKGFGKAKQ MFYPFRKAKKQILRRRIKR   SS SSSSSSVTC+RR
Subjt:  MLESRHAENNISDVGCSGVNDDGDDEDDETRKTVAKTEIGHDDFDDDPKMEIGKKGFGKAKQAMFYPFRKAKKQILRRRIKRASSSSSSSSSSSVTCTRR

Query:  TNSSDKRGFDGSVNQGCGFCFAKLSISDSKNGSPTDPNHGKFTYEMLKVLIEKNDFYSKESNPH
        TNS DKRGFDGSVNQGCGFC  KLSISDSKNGSPTDPNH KFT EMLKVLIEKNDFYSKESNPH
Subjt:  TNSSDKRGFDGSVNQGCGFCFAKLSISDSKNGSPTDPNHGKFTYEMLKVLIEKNDFYSKESNPH

A0A1S3BWA1 uncharacterized protein LOC1034938245.9e-7186.39Show/hide
Query:  MLESRHAENNISDVGCSGVNDDGDDEDDETRKTVAKTEIGHDDFDDDPKMEIGKKGFGKAKQAMFYPFRKAKKQILRRRIKRASSSSS----SSSSSSVT
        MLESRHAENNISDVGCSGVNDDGDDEDDETR T+AKT+I  D+FDDD KME+GKKGFGKAKQ MFYPFRKAKKQILRRRIKR SS SS    SSSS SV 
Subjt:  MLESRHAENNISDVGCSGVNDDGDDEDDETRKTVAKTEIGHDDFDDDPKMEIGKKGFGKAKQAMFYPFRKAKKQILRRRIKRASSSSS----SSSSSSVT

Query:  CTRRTNSSDKRGFDGSVNQGCGFCFAKLSISDSKNGSPTDPNHGKFTYEMLKVLIEKNDFYSKESNPHL
        C+RRTNS DKRGFDGSVNQGCGFC  KLSISDSKNGSPTDPNH KFT EMLKVLIEKNDFYSKESNPHL
Subjt:  CTRRTNSSDKRGFDGSVNQGCGFCFAKLSISDSKNGSPTDPNHGKFTYEMLKVLIEKNDFYSKESNPHL

A0A6J1G2R9 uncharacterized protein LOC1114502621.3e-5475.3Show/hide
Query:  MLESRHAENNISDVGCSGVNDDGDDEDDETRKTVAKTEIGHDDFDDDPKMEIGK-KGFGKAKQAMFYPFRKAKKQILRRRIKRASSSSSSSSSSSVTCTR
        MLES +AEN++SDVGCSGVNDD DDEDDE RK++AK +I   D        +GK KGFGKAK+ M YPFRKAKKQILRRRIKR   SSS SSSSSV C R
Subjt:  MLESRHAENNISDVGCSGVNDDGDDEDDETRKTVAKTEIGHDDFDDDPKMEIGK-KGFGKAKQAMFYPFRKAKKQILRRRIKRASSSSSSSSSSSVTCTR

Query:  RTNSSDKRGFDGSVNQGCGFCFAKLSISDSKNGSPTDPNHGKFTYEMLKVLIEKNDFYSKESNPHL
        RT+SSDK  FDGSVNQGCGFCF KLSISD KNG PTDPNH KFT +MLKVLIEKNDFYSKESNPHL
Subjt:  RTNSSDKRGFDGSVNQGCGFCFAKLSISDSKNGSPTDPNHGKFTYEMLKVLIEKNDFYSKESNPHL

A0A6J1HWU1 uncharacterized protein LOC1114685982.5e-5372.99Show/hide
Query:  MLESRHAENNISDVGCSGVNDDGDDEDDETRKTVAKTEIGHDDFDDDP---------KMEIGKKGFGKAKQAMFYPFRKAKKQILRRRIKRASSSSSSSS
        M ES+H EN IS V CS VN DG    DETRK +A  EI  DD DDD          KMEIGKKGFGKAKQ MFYPFRKAKKQILR RIKR SS SSS S
Subjt:  MLESRHAENNISDVGCSGVNDDGDDEDDETRKTVAKTEIGHDDFDDDP---------KMEIGKKGFGKAKQAMFYPFRKAKKQILRRRIKRASSSSSSSS

Query:  SSSVTCTRRTNSSDKRGFDGSVNQGCGFCFAKLSISDSKNGSPTDPNHGKFTYEMLKVLIEKNDFYSKESNPHL
        SS  + T RTNS DK  +D SVNQGCGFCFAK SISDSKNGSPTDPNH KFT EMLKVLIEKNDFYSKESNPHL
Subjt:  SSSVTCTRRTNSSDKRGFDGSVNQGCGFCFAKLSISDSKNGSPTDPNHGKFTYEMLKVLIEKNDFYSKESNPHL

A0A6J1KI22 uncharacterized protein LOC1114940221.1e-5677.71Show/hide
Query:  MLESRHAENNISDVGCSGVNDDGDDEDDETRKTVAKTEIGHDDFDDDPKMEIGK-KGFGKAKQAMFYPFRKAKKQILRRRIKRASSSSSSSSSSSVTCTR
        MLES +AEN++SDVGCSGVNDDGDDED+E RK++AK +I   D        +GK KGFGKAK+ M YPFRKAKKQILRRRIKR   SSS SSSSSV CTR
Subjt:  MLESRHAENNISDVGCSGVNDDGDDEDDETRKTVAKTEIGHDDFDDDPKMEIGK-KGFGKAKQAMFYPFRKAKKQILRRRIKRASSSSSSSSSSSVTCTR

Query:  RTNSSDKRGFDGSVNQGCGFCFAKLSISDSKNGSPTDPNHGKFTYEMLKVLIEKNDFYSKESNPHL
        RT+SSDKR FDGSVNQGCGFCF KLSISDSKNG PTDPNH KFT EMLKVLIEKNDFYSKESNPHL
Subjt:  RTNSSDKRGFDGSVNQGCGFCFAKLSISDSKNGSPTDPNHGKFTYEMLKVLIEKNDFYSKESNPHL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAATCACGACATGCTGAGAATAATATCTCAGATGTTGGTTGTAGTGGTGTTAATGACGATGGCGATGATGAAGACGACGAGACTCGTAAAACTGTGGCGAAGAC
CGAAATCGGGCATGATGATTTTGATGATGATCCAAAAATGGAGATTGGTAAAAAGGGTTTTGGTAAGGCCAAACAGGCGATGTTTTATCCATTTCGAAAGGCGAAGAAAC
AAATTCTTCGGCGGAGAATTAAGAGGGCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTGTTACTTGCACTAGAAGAACAAATTCTTCGGATAAGAGGGGTTTTGAT
GGGAGTGTTAATCAAGGTTGTGGTTTCTGTTTTGCCAAACTTTCCATTTCAGATTCTAAGAATGGGTCTCCGACTGACCCTAATCACGGGAAGTTCACTTATGAAATGTT
GAAAGTTCTTATTGAGAAGAATGATTTCTATTCCAAAGAATCCAACCCTCACTTGGTGACCAAGAAGTTATGGTGGAGGATGAAGTTGAGGATTTCAATAAGGCCACTGC
TAATGTTTGTAACATTGGTTCAGAAAATCTGCATACTGATGACTAGTCTTTTAGAGAAGATGGAGATTTTTCTGGAGATGGTCTTTATTCTTTTGTTTGATGATAAGCAA
TTTGGATTGGAGGTCCCTCCTGCAATTGATCCCTCTTCCCAAGCTATTGTTATGAAGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAATCACGACATGCTGAGAATAATATCTCAGATGTTGGTTGTAGTGGTGTTAATGACGATGGCGATGATGAAGACGACGAGACTCGTAAAACTGTGGCGAAGAC
CGAAATCGGGCATGATGATTTTGATGATGATCCAAAAATGGAGATTGGTAAAAAGGGTTTTGGTAAGGCCAAACAGGCGATGTTTTATCCATTTCGAAAGGCGAAGAAAC
AAATTCTTCGGCGGAGAATTAAGAGGGCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTGTTACTTGCACTAGAAGAACAAATTCTTCGGATAAGAGGGGTTTTGAT
GGGAGTGTTAATCAAGGTTGTGGTTTCTGTTTTGCCAAACTTTCCATTTCAGATTCTAAGAATGGGTCTCCGACTGACCCTAATCACGGGAAGTTCACTTATGAAATGTT
GAAAGTTCTTATTGAGAAGAATGATTTCTATTCCAAAGAATCCAACCCTCACTTGGTGACCAAGAAGTTATGGTGGAGGATGAAGTTGAGGATTTCAATAAGGCCACTGC
TAATGTTTGTAACATTGGTTCAGAAAATCTGCATACTGATGACTAGTCTTTTAGAGAAGATGGAGATTTTTCTGGAGATGGTCTTTATTCTTTTGTTTGATGATAAGCAA
TTTGGATTGGAGGTCCCTCCTGCAATTGATCCCTCTTCCCAAGCTATTGTTATGAAGCCATGACCTTCTTTGGGTCTCTCTGAGCCGAGTTGGTTGCCCTGCTTTCATTC
TCCCTTCACGTAGGAAGATCTCTTTCAATATGGTGCAGAAACTGAGAGTACTTTTTATGAGATTAAGCCTAAAAATTAGGTCTGGTTTTCTGAATGGTTTTATTGCTACT
GTTGGTTTTCTGCTGCCAAGTCATTTTGTGAGCTGGAGTTTGCTTTCAATAGCCTCGTTGGTGGTCTTTCTGCTTTTGAATGTTGACTCTTCTGTTTGGTGGCTTTTCTT
TGGAGGTTTTTGGCGTTGTTGACTGGGTATGGTGCCTTGCTCCTTTCCTCTTTGATGTTCGCGGCTGAGGCTTTCCTTGTGGAGTTATCTTCTGAAAAATCATTTTTCAG
GGTCTGTGTTTGGTTGGGTCCTTTTTGTTCTTGGAGAGCTTGTTTTGCCAATTTTTTCTTATATATATCTTCTTGTCATTAGTTTGGTAGGATGCTTTGTTCTTTTCCCT
CCAAATCGGAGTTTGTATTATTGAGCATTTTATATCTTTCCATTAAATCAATAAAAAAGGTGTTTCTTGTTAAAGAAAAAAAAGGTGCGAG
Protein sequenceShow/hide protein sequence
MLESRHAENNISDVGCSGVNDDGDDEDDETRKTVAKTEIGHDDFDDDPKMEIGKKGFGKAKQAMFYPFRKAKKQILRRRIKRASSSSSSSSSSSVTCTRRTNSSDKRGFD
GSVNQGCGFCFAKLSISDSKNGSPTDPNHGKFTYEMLKVLIEKNDFYSKESNPHLVTKKLWWRMKLRISIRPLLMFVTLVQKICILMTSLLEKMEIFLEMVFILLFDDKQ
FGLEVPPAIDPSSQAIVMKP